Shilin Zhao Center for Quantitative Sciences Vanderbilt University School of Medicine Biography Publications Institution JoVE Articles Shilin Zhao has not added a biography. If you are Shilin Zhao and would like to personalize this page please email our Author Liaison for assistance. Publications Sequencing Treatment in BRAFV600 Mutant Melanoma: Anti-PD-1 Before and After BRAF Inhibition Journal of Immunotherapy (Hagerstown, Md. : 1997). Nov, 2016 | Pubmed ID: 27846054 RNA Sequencing of Formalin-Fixed, Paraffin-Embedded Specimens for Gene Expression Quantification and Data Mining International Journal of Genomics. 2016 | Pubmed ID: 27774452 Multi-perspective Quality Control of Illumina RNA Sequencing Data Analysis Briefings in Functional Genomics. Sep, 2016 | Pubmed ID: 27687708 Practicability of Mitochondrial Heteroplasmy Detection Through an Illumina Genotyping Array Mitochondrion. Nov, 2016 | Pubmed ID: 27628068 Heterozygosity Ratio, a Robust Global Genomic Measure of Autozygosity and Its Association with Height and Disease Risk Genetics. Aug, 2016 | Pubmed ID: 27585849 Genetically Predicted Body Mass Index and Breast Cancer Risk: Mendelian Randomization Analyses of Data from 145,000 Women of European Descent PLoS Medicine. Aug, 2016 | Pubmed ID: 27551723 LncRNA Expression in the Auditory Forebrain During Postnatal Development Gene. Nov, 2016 | Pubmed ID: 27544636 Prolonged Benefit from Ipilimumab Correlates with Improved Outcomes from Subsequent Pembrolizumab Cancer Immunology Research. Jul, 2016 | Pubmed ID: 27197063 Practicability of Detecting Somatic Point Mutation from RNA High Throughput Sequencing Data Genomics. May, 2016 | Pubmed ID: 27046520 Mitochondria Single Nucleotide Variation Across Six Blood Cell Types Mitochondrion. May, 2016 | Pubmed ID: 26956645 A Micro-RNA Expression Signature for Human NAFLD Progression Journal of Gastroenterology. Oct, 2016 | Pubmed ID: 26874844 Acquired BRAF Inhibitor Resistance: A Multicenter Meta-analysis of the Spectrum and Frequencies, Clinical Behaviour, and Phenotypic Associations of Resistance Mechanisms European Journal of Cancer (Oxford, England : 1990). Dec, 2015 | Pubmed ID: 26608120 RNAseq by Total RNA Library Identifies Additional RNAs Compared to Poly(A) RNA Library BioMed Research International. 2015 | Pubmed ID: 26543871 Transfer RNA Detection by Small RNA Deep Sequencing and Disease Association with Myelodysplastic Syndromes BMC Genomics. Sep, 2015 | Pubmed ID: 26400237 Aberrant Over-expression of COX-1 Intersects Multiple Pro-tumorigenic Pathways in High-grade Serous Ovarian Cancer Oncotarget. Aug, 2015 | Pubmed ID: 25972361 Clinical Activity of Ipilimumab in Acral Melanoma: A Retrospective Review The Oncologist. Jun, 2015 | Pubmed ID: 25964307 Survivorship in Immune Therapy: Assessing Chronic Immune Toxicities, Health Outcomes, and Functional Status Among Long-term Ipilimumab Survivors at a Single Referral Center Cancer Immunology Research. May, 2015 | Pubmed ID: 25649350 Transcriptome-wide Signatures of Tumor Stage in Kidney Renal Clear Cell Carcinoma: Connecting Copy Number Variation, Methylation and Transcription Factor Activity Genome Medicine. 2014 | Pubmed ID: 25648588 RNAseqPS: A Web Tool for Estimating Sample Size and Power for RNAseq Experiment Cancer Informatics. 2014 | Pubmed ID: 25374457 Detection of Internal Exon Deletion with Exon Del BMC Bioinformatics. Oct, 2014 | Pubmed ID: 25322818 Illumina Human Exome Genotyping Array Clustering and Quality Control Nature Protocols. Nov, 2014 | Pubmed ID: 25321409 Statistical Strategies for MicroRNAseq Batch Effect Reduction Translational Cancer Research. Jun, 2014 | Pubmed ID: 25258704 Advanced Heat Map and Clustering Analysis Using Heatmap3 BioMed Research International. 2014 | Pubmed ID: 25143956 MultiRankSeq: Multiperspective Approach for RNAseq Differential Expression Analysis and Quality Control BioMed Research International. 2014 | Pubmed ID: 24977143 Dermatology Recorded in Oracle Bone Inscriptions Chinese Medical Journal. 2014 | Pubmed ID: 24824272 Multi-perspective Quality Control of Illumina Exome Sequencing Data Using QC3 Genomics. May-Jun, 2014 | Pubmed ID: 24703969 Gene and Isoform Expression Signatures Associated with Tumor Stage in Kidney Renal Clear Cell Carcinoma BMC Systems Biology. 2013 | Pubmed ID: 24564989 The Application of SILAC Mouse in Human Body Fluid Proteomics Analysis Reveals Protein Patterns Associated with IgA Nephropathy Evidence-based Complementary and Alternative Medicine : ECAM. 2013 | Pubmed ID: 23762118 Isolation of High-density Lipoproteins for Non-coding Small RNA Quantification Danielle L. Michell*1, Ryan M. Allen*1, Stuart R. Landstreet1, Shilin Zhao2, Cynthia L. Toth1, Quanhu Sheng3, Kasey C. Vickers1,2 1Department of Medicine, Vanderbilt University School of Medicine, 2Center for Quantitative Sciences, Vanderbilt University School of Medicine, 3Department of Cancer Biology, Vanderbilt University School of Medicine JoVE 54488 Biochemistry
Isolation of High-density Lipoproteins for Non-coding Small RNA Quantification Danielle L. Michell*1, Ryan M. Allen*1, Stuart R. Landstreet1, Shilin Zhao2, Cynthia L. Toth1, Quanhu Sheng3, Kasey C. Vickers1,2 1Department of Medicine, Vanderbilt University School of Medicine, 2Center for Quantitative Sciences, Vanderbilt University School of Medicine, 3Department of Cancer Biology, Vanderbilt University School of Medicine JoVE 54488 Biochemistry
