Simon Lin Research Information Solutions and Innovation The Research Institute at Nationwide Children’s Hospital Biography Publications Institution JoVE Articles Simon Lin has not added a biography. If you are Simon Lin and would like to personalize this page please email our Author Liaison for assistance. Publications Patient-centered Design Criteria for Wearable Seizure Detection Devices Epilepsy & Behavior : E&B. Nov, 2016 | Pubmed ID: 27741462 MYPT1 Isoforms Expressed in HEK293T Cells Are Differentially Phosphorylated After GTPγS Treatment Journal of Smooth Muscle Research = Nihon Heikatsukin Gakkai Kikanshi. 2016 | Pubmed ID: 27725371 Associations of Blood Mercury, Inorganic Mercury, Methyl Mercury and Bisphenol A with Dental Surface Restorations in the U.S. Population, NHANES 2003-2004 and 2010-2012 Ecotoxicology and Environmental Safety. Dec, 2016 | Pubmed ID: 27639196 The Health Care and Life Sciences Community Profile for Dataset Descriptions PeerJ. 2016 | Pubmed ID: 27602295 'RE:fine Drugs': an Interactive Dashboard to Access Drug Repurposing Opportunities Database : the Journal of Biological Databases and Curation. 2016 | Pubmed ID: 27189611 MD-CTS: An Integrated Terminology Reference of Clinical and Translational Medicine Computational and Structural Biotechnology Journal. 2016 | Pubmed ID: 27069559 Computerized "Learn-As-You-Go" Classification of Traumatic Brain Injuries Using NEISS Narrative Data Accident; Analysis and Prevention. Apr, 2016 | Pubmed ID: 26851618 A Review on Genomics APIs Computational and Structural Biotechnology Journal. 2016 | Pubmed ID: 26702340 A Practical Guide for Exploring Opportunities of Repurposing Drugs for CNS Diseases in Systems Biology Methods in Molecular Biology (Clifton, N.J.). 2016 | Pubmed ID: 26235090 WHATIF: An Open-source Desktop Application for Extraction and Management of the Incidental Findings from Next-generation Sequencing Variant Data Computers in Biology and Medicine. Jan, 2016 | Pubmed ID: 25890833 Practical Considerations in Genomic Decision Support: The EMERGE Experience Journal of Pathology Informatics. 2015 | Pubmed ID: 26605115 A Conceptual Model for Translating Omic Data into Clinical Action Journal of Pathology Informatics. 2015 | Pubmed ID: 26430534 Context-Sensitive Spelling Correction of Consumer-Generated Content on Health Care JMIR Medical Informatics. Jul, 2015 | Pubmed ID: 26232246 Collecting and Analyzing Patient Experiences of Health Care From Social Media JMIR Research Protocols. Jul, 2015 | Pubmed ID: 26137885 Comparison of RNA-seq and Microarray-based Models for Clinical Endpoint Prediction Genome Biology. Jun, 2015 | Pubmed ID: 26109056 Opportunities for Drug Repositioning from Phenome-wide Association Studies Nature Biotechnology. Apr, 2015 | Pubmed ID: 25850054 Application of Clinical Text Data for Phenome-wide Association Studies (PheWASs) Bioinformatics (Oxford, England). Jun, 2015 | Pubmed ID: 25657332 The Cell Cycle Regulator Ecdysoneless Cooperates with H-Ras to Promote Oncogenic Transformation of Human Mammary Epithelial Cells Cell Cycle (Georgetown, Tex.). 2015 | Pubmed ID: 25616580 SeqHBase: a Big Data Toolset for Family Based Sequencing Data Analysis Journal of Medical Genetics. Apr, 2015 | Pubmed ID: 25587064 Privacy in Pharmacogenetics: An End-to-End Case Study of Personalized Warfarin Dosing Proceedings of the ... USENIX Security Symposium. UNIX Security Symposium. Aug, 2014 | Pubmed ID: 27077138 Efficiently Mining Adverse Event Reporting System for Multiple Drug Interactions AMIA Joint Summits on Translational Science Proceedings. AMIA Joint Summits on Translational Science. 2014 | Pubmed ID: 25717411 A Fuzzy-match Search Engine for Physician Directories JMIR Medical Informatics. Nov, 2014 | Pubmed ID: 25601050 Enabling Online Studies of Conceptual Relationships Between Medical Terms: Developing an Efficient Web Platform JMIR Medical Informatics. Oct, 2014 | Pubmed ID: 25600290 Assessing Technical Performance in Differential Gene Expression Experiments with External Spike-in RNA Control Ratio Mixtures Nature Communications. 2014 | Pubmed ID: 25254650 Phenome-wide Association Studies Demonstrating Pleiotropy of Genetic Variants Within FTO with and Without Adjustment for Body Mass Index Frontiers in Genetics. 2014 | Pubmed ID: 25177340 A Google Glass Application to Support Shoppers with Dietary Management of Diabetes Journal of Diabetes Science and Technology. Nov, 2014 | Pubmed ID: 25015954 Computational Evidence of NAGNAG Alternative Splicing in Human Large Intergenic Noncoding RNA BioMed Research International. 2014 | Pubmed ID: 24995327 Patients Surviving Six Months in Hospice Care: Who Are They? Journal of Palliative Medicine. Aug, 2014 | Pubmed ID: 24933676 Rodriguez Syndrome with SF3B4 Mutation: a Severe Form of Nager Syndrome? American Journal of Medical Genetics. Part A. Jul, 2014 | Pubmed ID: 24715698 In Vitro Evaluation of Novel Inhibitors Against the NS2B-NS3 Protease of Dengue Fever Virus Type 4 Molecules (Basel, Switzerland). Dec, 2013 | Pubmed ID: 24352016 Some Experiences and Opportunities for Big Data in Translational Research Genetics in Medicine : Official Journal of the American College of Medical Genetics. Oct, 2013 | Pubmed ID: 24008998 Transcriptional Events During the Recovery from MRSA Lung Infection: a Mouse Pneumonia Model PloS One. 2013 | Pubmed ID: 23936388 An RDF/OWL Knowledge Base for Query Answering and Decision Support in Clinical Pharmacogenetics Studies in Health Technology and Informatics. 2013 | Pubmed ID: 23920613 Linezolid Exerts Greater Bacterial Clearance but No Modification of Host Lung Gene Expression Profiling: A Mouse MRSA Pneumonia Model PloS One. 2013 | Pubmed ID: 23826353 Inspired by Intricacy. Interviewed by Elizabeth Gardner Health Data Management. Apr, 2013 | Pubmed ID: 23638605 The Disease and Gene Annotations (DGA): an Annotation Resource for Human Disease Nucleic Acids Research. Jan, 2013 | Pubmed ID: 23197658 A Framework for Annotating Human Genome in Disease Context PloS One. 2012 | Pubmed ID: 23251346 A Statistical Framework for Accurate Taxonomic Assignment of Metagenomic Sequencing Reads PloS One. 2012 | Pubmed ID: 23049702 Technical Reproducibility of Genotyping SNP Arrays Used in Genome-wide Association Studies PloS One. 2012 | Pubmed ID: 22970228 Genome-wide Study of DNA Methylation Alterations in Response to Diazinon Exposure in Vitro Environmental Toxicology and Pharmacology. Nov, 2012 | Pubmed ID: 22964155 DNA Methylation Alterations in Response to Pesticide Exposure in Vitro Environmental and Molecular Mutagenesis. Aug, 2012 | Pubmed ID: 22847954 Opportunities in Systems Biology to Discover Mechanisms and Repurpose Drugs for CNS Diseases Drug Discovery Today. Nov, 2012 | Pubmed ID: 22750722 Meiosis-induced Alterations in Transcript Architecture and Noncoding RNA Expression in S. Cerevisiae RNA (New York, N.Y.). Jun, 2012 | Pubmed ID: 22539527 게놈 전체 DNA 메 틸 화 Leiomyoma 자 궁에 있는 종양 억제기 유전자의 입을 나타냅니다 PloS One. 2012 | Pubmed ID: 22428009 Using the Bioconductor GeneAnswers Package to Interpret Gene Lists Methods in Molecular Biology (Clifton, N.J.). 2012 | Pubmed ID: 22130876 Genomic Sequencing in Clinical Trials Journal of Translational Medicine. Dec, 2011 | Pubmed ID: 22206293 Mining the Gene Wiki for Functional Genomic Knowledge BMC Genomics. Dec, 2011 | Pubmed ID: 22165947 PLoS Computational Biology Conference Postcards from ISMB/ECCB 2011 PLoS Computational Biology. Nov, 2011 | Pubmed ID: 22125481 Improved Statistical Analysis for Array CGH-Based DNA Copy Number Aberrations Cancer Informatics. 2011 | Pubmed ID: 22084565 Egr-1 Induces a Profibrotic Injury/repair Gene Program Associated with Systemic Sclerosis PloS One. 2011 | Pubmed ID: 21931594 Gene Expression Changes in Retinal Müller (glial) Cells Exposed to Elevated Pressure Current Eye Research. Aug, 2011 | Pubmed ID: 21780925 Activated TLR Signaling in Atherosclerosis Among Women with Lower Framingham Risk Score: the Multi-ethnic Study of Atherosclerosis PloS One. 2011 | Pubmed ID: 21698167 Gene Expression Variation Between African Americans and Whites is Associated with Coronary Artery Calcification: the Multiethnic Study of Atherosclerosis Physiological Genomics. Jul, 2011 | Pubmed ID: 21521779 The Early Growth Response Gene Egr2 (Alias Krox20) is a Novel Transcriptional Target of Transforming Growth Factor-β That is Up-regulated in Systemic Sclerosis and Mediates Profibrotic Responses The American Journal of Pathology. May, 2011 | Pubmed ID: 21514423 Ultrastructural, Immunofluorescence, and RNA Evidence Support the Hypothesis of a "new" Virus Associated with Kawasaki Disease The Journal of Infectious Diseases. Apr, 2011 | Pubmed ID: 21402552 Epithelial Regulation of Mesenchymal Tissue Behavior The Journal of Investigative Dermatology. Apr, 2011 | Pubmed ID: 21228814 L-methionine-induced Alterations in Molecular Signatures in MCF-7 and LNCaP Cancer Cells Journal of Cancer Research and Clinical Oncology. Mar, 2011 | Pubmed ID: 20454975 Comparison of Beta-value and M-value Methods for Quantifying Methylation Levels by Microarray Analysis BMC Bioinformatics. Nov, 2010 | Pubmed ID: 21118553 유전자 주석 정보의 텍스트 프레 젠 테이 션에 오신 것을 환영 대신 시각적 프레 젠 테이 션 Advances in Experimental Medicine and Biology. 2010 | Pubmed ID: 20865558 MicroArray 품질 관리 (MAQC)-2 차 연구 개발 및 Microarray 기반 예측 모델의 유효성 검사에 대 한 일반적인 관행 Nature Biotechnology. Aug, 2010 | Pubmed ID: 20676074 Suppression by L-methionine of Cell Cycle Progression in LNCaP and MCF-7 Cells but Not Benign Cells Anticancer Research. Jun, 2010 | Pubmed ID: 20651330 ChIPpeakAnno: a Bioconductor Package to Annotate ChIP-seq and ChIP-chip Data BMC Bioinformatics. May, 2010 | Pubmed ID: 20459804 A Collection of Bioconductor Methods to Visualize Gene-list Annotations BMC Research Notes. Jan, 2010 | Pubmed ID: 20180973 유전자 데이터베이스의 시각적 주석입니다 Conference Proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference. 2009 | Pubmed ID: 19964623 Using Free and Open-Source Bioconductor Packages to Analyze Array Comparative Genomics Hybridization (aCGH) Data Current Genomics. Mar, 2009 | Pubmed ID: 19721812 GATA-2 Reinforces Megakaryocyte Development in the Absence of GATA-1 Molecular and Cellular Biology. Sep, 2009 | Pubmed ID: 19620289 Annotating the Human Genome with Disease Ontology BMC Genomics. Jul, 2009 | Pubmed ID: 19594883 From Disease Ontology to Disease-ontology Lite: Statistical Methods to Adapt a General-purpose Ontology for the Test of Gene-ontology Associations Bioinformatics (Oxford, England). Jun, 2009 | Pubmed ID: 19478018 Genomics of Human Intracranial Aneurysm Wall Stroke. Apr, 2009 | Pubmed ID: 19228845 BALB/c Mice Genetically Susceptible to Proteoglycan-induced Arthritis and Spondylitis Show Colony-dependent Differences in Disease Penetrance Arthritis Research & Therapy. 2009 | Pubmed ID: 19220900 Intragraft TNF Receptor Signaling Contributes to Activation of Innate and Adaptive Immunity in a Renal Allograft Model Transplantation. Jan, 2009 | Pubmed ID: 19155971 Overexpression of RhoA Induces Preneoplastic Transformation of Primary Mammary Epithelial Cells Cancer Research. Jan, 2009 | Pubmed ID: 19147561 Expression of Cyclophilin B is Associated with Malignant Progression and Regulation of Genes Implicated in the Pathogenesis of Breast Cancer The American Journal of Pathology. Jan, 2009 | Pubmed ID: 19056847 A Divide-and-conquer Strategy to Solve the Out-of-memory Problem of Processing Thousands of Affymetrix Microarrays International Journal of Computational Biology and Drug Design. 2008 | Pubmed ID: 20063464 2009 and Beyond: the Decade of Personalised Medicine International Journal of Computational Biology and Drug Design. 2008 | Pubmed ID: 20063461 Gene Expression and Functional Studies of the Optic Nerve Head Astrocyte Transcriptome from Normal African Americans and Caucasian Americans Donors PloS One. Aug, 2008 | Pubmed ID: 18716680 Susceptibility to Glaucoma: Differential Comparison of the Astrocyte Transcriptome from Glaucomatous African American and Caucasian American Donors Genome Biology. 2008 | Pubmed ID: 18613964 Lumi: a Pipeline for Processing Illumina Microarray Bioinformatics (Oxford, England). Jul, 2008 | Pubmed ID: 18467348 Self-similarity in the Classification of Finite-size Scaling Functions for Toroidal Boundary Conditions Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. Jan, 2008 | Pubmed ID: 18351807 Model-based Variance-stabilizing Transformation for Illumina Microarray Data Nucleic Acids Research. Feb, 2008 | Pubmed ID: 18178591 Mining Biomedical Data Using MetaMap Transfer (MMtx) and the Unified Medical Language System (UMLS) Methods in Molecular Biology (Clifton, N.J.). 2007 | Pubmed ID: 18314582 Interpreting Microarray Results with Gene Ontology and MeSH Methods in Molecular Biology (Clifton, N.J.). 2007 | Pubmed ID: 17634620 Gene Expression Analysis of Frontotemporal Lobar Degeneration of the Motor Neuron Disease Type with Ubiquitinated Inclusions Acta Neuropathologica. Jul, 2007 | Pubmed ID: 17569064 The New York City Palliative Care Quality Improvement Collaborative Joint Commission Journal on Quality and Patient Safety. Jun, 2007 | Pubmed ID: 17566540 NuID: a Universal Naming Scheme of Oligonucleotides for Illumina, Affymetrix, and Other Microarrays Biology Direct. May, 2007 | Pubmed ID: 17540033 Other Riffs on Cooperation Are Already Showing How Well a Wiki Could Work Nature. Apr, 2007 | Pubmed ID: 17443163 Master Equation Approach to Folding Kinetics of Lattice Polymers Based on Conformation Networks The Journal of Chemical Physics. Apr, 2007 | Pubmed ID: 17430067 Grid-enabled High-throughput in Silico Screening Against Influenza A Neuraminidase IEEE Transactions on Nanobioscience. Dec, 2006 | Pubmed ID: 17181029 Improved Peak Detection in Mass Spectrum by Incorporating Continuous Wavelet Transform-based Pattern Matching Bioinformatics (Oxford, England). Sep, 2006 | Pubmed ID: 16820428 Partition Functions and Finite-size Scalings of Ising Model on Helical Tori Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. May, 2006 | Pubmed ID: 16802982 Improved Prediction of Treatment Response Using Microarrays and Existing Biological Knowledge Pharmacogenomics. Apr, 2006 | Pubmed ID: 16610959 Gene Expression Profiles of the Rat Brain Both Immediately and 3 Months Following Acute Sarin Exposure Biochemical Pharmacology. Feb, 2006 | Pubmed ID: 16376859 Molecular Profile and Partial Functional Analysis of Novel Endothelial Cell-derived Growth Factors That Regulate Hematopoiesis Stem Cells (Dayton, Ohio). May, 2006 | Pubmed ID: 16373696 Characterising Phase Variations in MALDI-TOF Data and Correcting Them by Peak Alignment Cancer Informatics. 2005 | Pubmed ID: 19305630 What is MzXML Good For? Expert Review of Proteomics. Dec, 2005 | Pubmed ID: 16307524 Irrational Exuberance in Clinical Proteomics Clinical Cancer Research : an Official Journal of the American Association for Cancer Research. Nov, 2005 | Pubmed ID: 16299224 Heterogeneity of Flt3-expressing Multipotent Progenitors in Mouse Bone Marrow Journal of Immunology (Baltimore, Md. : 1950). Oct, 2005 | Pubmed ID: 16210604 Differential Cardiac Gene Expression During Cardiopulmonary Bypass: Ischemia-independent Upregulation of Proinflammatory Genes The Journal of Thoracic and Cardiovascular Surgery. Aug, 2005 | Pubmed ID: 16077395 Loss of Patched and Disruption of Granule Cell Development in a Pre-neoplastic Stage of Medulloblastoma Development (Cambridge, England). May, 2005 | Pubmed ID: 15843415 RNA-binding Proteins to Assess Gene Expression States of Co-cultivated Cells in Response to Tumor Cells Molecular Cancer. Sep, 2004 | Pubmed ID: 15353001 Impaired Cell Adhesion and Apoptosis in a Novel CLN9 Batten Disease Variant Annals of Neurology. Sep, 2004 | Pubmed ID: 15349861 MedlineR: an Open Source Library in R for Medline Literature Data Mining Bioinformatics (Oxford, England). Dec, 2004 | Pubmed ID: 15284107 Data Mining Issues and Opportunities for Building Nursing Knowledge Journal of Biomedical Informatics. Aug-Oct, 2003 | Pubmed ID: 14643734 Transcriptional Profiling of the Sonic Hedgehog Response: a Critical Role for N-myc in Proliferation of Neuronal Precursors Proceedings of the National Academy of Sciences of the United States of America. Jun, 2003 | Pubmed ID: 12777630 QA/QC As a Pressing Need for Microarray Analysis: Meeting Report from CAMDA'02 BioTechniques. Mar, 2003 | Pubmed ID: 12664687 A Complexity Reduction Algorithm for Analysis and Annotation of Large Genomic Sequences Genome Research. Feb, 2003 | Pubmed ID: 12566410 Microarray Analysis: a Comparative Approach Molecular Cancer Therapeutics. Jan, 2002 | Pubmed ID: 12467218 Applications of Tree-Maps to Hierarchical Biological Data Bioinformatics (Oxford, England). Sep, 2002 | Pubmed ID: 12217926 Evolution and Structure Formation of the Distribution of Partition Function Zeros: Triangular Type Ising Lattices with Cell Decoration Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. Jun, 2002 | Pubmed ID: 12188800 Energy Landscape Paving for X-ray Structure Determination of Organic Molecules Acta Crystallographica. Section A, Foundations of Crystallography. May, 2002 | Pubmed ID: 11961287 은 "RE를 : 좋은 약"을 사용하여 의약품 용도 변경 가설 발전 시스템 Kelly Regan1, Soheil Moosavinasab2, Philip Payne1, Simon Lin2 1Department of Biomedical Informatics, The Ohio State University, 2Research Information Solutions and Innovation, The Research Institute at Nationwide Children’s Hospital Medicine
은 "RE를 : 좋은 약"을 사용하여 의약품 용도 변경 가설 발전 시스템 Kelly Regan1, Soheil Moosavinasab2, Philip Payne1, Simon Lin2 1Department of Biomedical Informatics, The Ohio State University, 2Research Information Solutions and Innovation, The Research Institute at Nationwide Children’s Hospital Medicine