Adam R. Abate Department of Bioengineering and Therapeutic Sciences, California Institute for Quantitative Biosciences University of California Biography Publications Institution JoVE Articles Adam R. Abate has not added a biography. If you are Adam R. Abate and would like to personalize this page please email our Author Liaison for assistance. Publications Precision Ejection of Microfluidic Droplets into Air with a Superhydrophobic Outlet Lab on a Chip. Mar, 2021 | Pubmed ID: 33656500 High Diversity Droplet Microfluidic Libraries Generated with a Commercial Liquid Spotter Scientific Reports. Feb, 2021 | Pubmed ID: 33623093 Accurate Bulk Quantitation of Droplet Digital PCR BioRxiv : the Preprint Server for Biology. Jan, 2021 | Pubmed ID: 33469578 Digital Droplet PCR Accurately Quantifies SARS-CoV-2 Viral Load from Crude Lysate Without Nucleic Acid Purification Scientific Reports. 01, 2021 | Pubmed ID: 33436939 Networks of High Aspect Ratio Particles to Direct Colloidal Assembly Dynamics and Cellular Interactions Advanced Functional Materials. Nov, 2020 | Pubmed ID: 33250685 High-Definition Single-Cell Printing: Cell-by-Cell Fabrication of Biological Structures Advanced Materials (Deerfield Beach, Fla.). Dec, 2020 | Pubmed ID: 33206435 Single-cell Mutation Analysis of Clonal Evolution in Myeloid Malignancies Nature. 11, 2020 | Pubmed ID: 33116311 Targeted Single-Cell RNA and DNA Sequencing With Fluorescence-Activated Droplet Merger Analytical Chemistry. 11, 2020 | Pubmed ID: 33049138 Multiplatform Genomic Profiling and Magnetic Resonance Imaging Identify Mechanisms Underlying Intratumor Heterogeneity in Meningioma Nature Communications. 09, 2020 | Pubmed ID: 32968068 Microfluidic Particle Zipper Enables Controlled Loading of Droplets with Distinct Particle Types Lab on a Chip. 07, 2020 | Pubmed ID: 32531004 Microfluidic Automated Plasmid Library Enrichment for Biosynthetic Gene Cluster Discovery Nucleic Acids Research. 05, 2020 | Pubmed ID: 32095820 Linked Optical and Gene Expression Profiling of Single Cells at High-throughput Genome Biology. 02, 2020 | Pubmed ID: 32093753 Multiplatform Molecular Profiling Reveals Epigenomic Intratumor Heterogeneity in Ependymoma Cell Reports. 02, 2020 | Pubmed ID: 32023450 Discovery of Stable and Selective Antibody Mimetics from Combinatorial Libraries of Polyvalent, Loop-Functionalized Peptoid Nanosheets ACS Nano. 01, 2020 | Pubmed ID: 31789500 Uniform, Large-Area, Highly Ordered Peptoid Monolayer and Bilayer Films for Sensing Applications Langmuir : the ACS Journal of Surfaces and Colloids. 10, 2019 | Pubmed ID: 31603340 Human Intestinal Spheroids Cultured Using Sacrificial Micromolding As a Model System for Studying Drug Transport Scientific Reports. 07, 2019 | Pubmed ID: 31289365 High Throughput Gene Expression Profiling of Yeast Colonies with Microgel-culture Drop-seq Lab on a Chip. 05, 2019 | Pubmed ID: 31020292 Reference-based Analysis of Lung Single-cell Sequencing Reveals a Transitional Profibrotic Macrophage Nature Immunology. 02, 2019 | Pubmed ID: 30643263 Direct Quantification of EGFR Variant Allele Frequency in Cell-free DNA Using a Microfluidic-free Digital Droplet PCR Assay Methods in Cell Biology. 2018 | Pubmed ID: 30473066 Microfluidic Bead Encapsulation Above 20 KHz with Triggered Drop Formation Lab on a Chip. 12, 2018 | Pubmed ID: 30362490 Particle-Templated Emulsification for Microfluidics-Free Digital Biology Analytical Chemistry. 08, 2018 | Pubmed ID: 30033717 An Oil-Free Picodrop Bioassay Platform for Synthetic Biology Scientific Reports. 05, 2018 | Pubmed ID: 29784937 A Comparative Analysis of Single Cell and Droplet-based FACS for Improving Production Phenotypes: Riboflavin Overproduction in Yarrowia Lipolytica Metabolic Engineering. 05, 2018 | Pubmed ID: 29698778 Combined Aptamer and Transcriptome Sequencing of Single Cells Scientific Reports. Feb, 2018 | Pubmed ID: 29440771 Concentric Electrodes Improve Microfluidic Droplet Sorting Lab on a Chip. 02, 2018 | Pubmed ID: 29383336 Single-Cell RT-PCR in Microfluidic Droplets with Integrated Chemical Lysis Analytical Chemistry. 01, 2018 | Pubmed ID: 29256243 Measurement of Copy Number Variation in Single Cancer Cells Using Rapid-emulsification Digital Droplet MDA Microsystems & Nanoengineering. 2017 | Pubmed ID: 30147985 Bulk Double Emulsification for Flow Cytometric Analysis of Microfluidic Droplets The Analyst. Dec, 2017 | Pubmed ID: 29131209 RNA-aptamers-in-droplets (RAPID) High-throughput Screening for Secretory Phenotypes Nature Communications. 08, 2017 | Pubmed ID: 28835641 Rapid, Chemical-free Breaking of Microfluidic Emulsions with a Hand-held Antistatic Gun Biomicrofluidics. Jul, 2017 | Pubmed ID: 28794817 Printed Droplet Microfluidics for on Demand Dispensing of Picoliter Droplets and Cells Proceedings of the National Academy of Sciences of the United States of America. 08, 2017 | Pubmed ID: 28760972 Single-cell Genome Sequencing at Ultra-high-throughput with Microfluidic Droplet Barcoding Nature Biotechnology. Jul, 2017 | Pubmed ID: 28553940 Finding a Helix in a Haystack: Nucleic Acid Cytometry with Droplet Microfluidics Lab on a Chip. 06, 2017 | Pubmed ID: 28540956 Abseq: Ultrahigh-throughput Single Cell Protein Profiling with Droplet Microfluidic Barcoding Scientific Reports. 03, 2017 | Pubmed ID: 28290550 Genetic Interaction Mapping with Microfluidic-based Single Cell Sequencing PloS One. 2017 | Pubmed ID: 28170417 Sequence Specific Sorting of DNA Molecules with FACS Using 3dPCR Scientific Reports. 01, 2017 | Pubmed ID: 28051104 PCR-activated Cell Sorting As a General, Cultivation-free Method for High-throughput Identification and Enrichment of Virus Hosts Journal of Virological Methods. 04, 2017 | Pubmed ID: 28042018 Operation of Droplet-Microfluidic Devices with a Lab Centrifuge Micromachines. Sep, 2016 | Pubmed ID: 30404331 Peering Below the Diffraction Limit: Robust and Specific Sorting of Viruses with Flow Cytometry Virology Journal. 12, 2016 | Pubmed ID: 27906039 Droplet Barcoding for Massively Parallel Single-molecule Deep Sequencing Nature Communications. 06, 2016 | Pubmed ID: 27353563 Enhanced Sequencing Coverage with Digital Droplet Multiple Displacement Amplification Nucleic Acids Research. Apr, 2016 | Pubmed ID: 26704978 Patterning Microfluidic Device Wettability with Spatially-controlled Plasma Oxidation Lab on a Chip. Aug, 2015 | Pubmed ID: 26105774 Dissecting Enzyme Function with Microfluidic-based Deep Mutational Scanning Proceedings of the National Academy of Sciences of the United States of America. Jun, 2015 | Pubmed ID: 26040002 Compact and Modular Multicolour Fluorescence Detector for Droplet Microfluidics Lab on a Chip. Jul, 2015 | Pubmed ID: 26032595 Microfluidic Droplet Enrichment for Targeted Sequencing Nucleic Acids Research. Jul, 2015 | Pubmed ID: 25873629 PCR-activated Cell Sorting for Cultivation-free Enrichment and Sequencing of Rare Microbes PloS One. 2015 | Pubmed ID: 25629401 Rapid Modulation of Droplet Composition with Pincer Microvalves Lab on a Chip. Jan, 2015 | Pubmed ID: 25385230 Accurate Microfluidic Sorting of Droplets at 30 KHz Lab on a Chip. Jan, 2015 | Pubmed ID: 25352174 Identification and Genetic Analysis of Cancer Cells with PCR-activated Cell Sorting Nucleic Acids Research. 2014 | Pubmed ID: 25030902 Coaxial Flow Focusing in Poly(dimethylsiloxane) Microfluidic Devices Biomicrofluidics. Jan, 2014 | Pubmed ID: 24753732 Generating Electric Fields in PDMS Microfluidic Devices with Salt Water Electrodes Lab on a Chip. Mar, 2014 | Pubmed ID: 24671446 Adding Reagent to Droplets with Controlled Rupture of Encapsulated Double Emulsions Biomicrofluidics. 2013 | Pubmed ID: 24404045 Block-and-break Generation of Microdroplets with Fixed Volume Biomicrofluidics. 2013 | Pubmed ID: 24404013 DNA Sequence Analysis with Droplet-based Microfluidics Lab on a Chip. Dec, 2013 | Pubmed ID: 24185402 Ultrahigh-throughput Sorting of Microfluidic Drops with Flow Cytometry Lab on a Chip. Dec, 2013 | Pubmed ID: 24146020 Ultrahigh-throughput Mammalian Single-cell Reverse-transcriptase Polymerase Chain Reaction in Microfluidic Drops Analytical Chemistry. Aug, 2013 | Pubmed ID: 23885761 Picoinjection Enables Digital Detection of RNA with Droplet Rt-PCR PloS One. 2013 | Pubmed ID: 23658657 Adhesive-based Bonding Technique for PDMS Microfluidic Devices Lab on a Chip. Feb, 2013 | Pubmed ID: 23282717 Flow Focusing Geometry Generates Droplets Through a Plug and Squeeze Mechanism Lab on a Chip. Dec, 2012 | Pubmed ID: 23117576 Electrode-free Picoinjection of Microfluidic Drops Lab on a Chip. Oct, 2012 | Pubmed ID: 22930333 Non-coalescence of Oppositely Charged Droplets in PH-sensitive Emulsions Proceedings of the National Academy of Sciences of the United States of America. Jan, 2012 | Pubmed ID: 22203968 Particle Templated Emulsification enables Microfluidic-Free Droplet Assays Daniel W. Weisgerber1, Makiko N. Hatori1, Adam R. Abate1,2 1Department of Bioengineering and Therapeutic Sciences, California Institute for Quantitative Biosciences, University of California, 2Chan Zuckerberg Biohub JoVE 62248 Biology An Ultrahigh-throughput Microfluidic Platform for Single-cell Genome Sequencing Benjamin Demaree1,2, Daniel Weisgerber1, Freeman Lan1,2, Adam R. Abate1,2,3 1Department of Bioengineering and Therapeutic Sciences, California Institute for Quantitative Biosciences, University of California, San Francisco, 2UC Berkeley-UCSF Graduate Program in Bioengineering, University of California, San Francisco, 3Chan Zuckerberg Biohub JoVE 57598 Bioengineering Multicolor Fluorescence Detection for Droplet Microfluidics Using Optical Fibers Russell H. Cole1, Zev J. Gartner1, Adam R. Abate2 1Department of Pharmaceutical Chemistry, University of California, San Francisco, 2Department of Bioengineering and Therapeutic Sciences, California Institute for Quantitative Biosciences, University of California, San Francisco JoVE 54010 Bioengineering Double Emulsion Generation Using a Polydimethylsiloxane (PDMS) Co-axial Flow Focus Device Russell H. Cole1, Tuan M. Tran2, Adam R. Abate3,4 1Department of Pharmaceutical Chemistry, University of California, San Francisco, 2Joint UCSF/UCB Bioengineering Graduate Group, University of California, San Francisco, 3Department of Bioengineering and Therapeutic Sciences, University of California, San Francisco, 4California Institute for Quantitative Biosciences, University of California, San Francisco JoVE 53516 Bioengineering
Particle Templated Emulsification enables Microfluidic-Free Droplet Assays Daniel W. Weisgerber1, Makiko N. Hatori1, Adam R. Abate1,2 1Department of Bioengineering and Therapeutic Sciences, California Institute for Quantitative Biosciences, University of California, 2Chan Zuckerberg Biohub JoVE 62248 Biology
An Ultrahigh-throughput Microfluidic Platform for Single-cell Genome Sequencing Benjamin Demaree1,2, Daniel Weisgerber1, Freeman Lan1,2, Adam R. Abate1,2,3 1Department of Bioengineering and Therapeutic Sciences, California Institute for Quantitative Biosciences, University of California, San Francisco, 2UC Berkeley-UCSF Graduate Program in Bioengineering, University of California, San Francisco, 3Chan Zuckerberg Biohub JoVE 57598 Bioengineering
Multicolor Fluorescence Detection for Droplet Microfluidics Using Optical Fibers Russell H. Cole1, Zev J. Gartner1, Adam R. Abate2 1Department of Pharmaceutical Chemistry, University of California, San Francisco, 2Department of Bioengineering and Therapeutic Sciences, California Institute for Quantitative Biosciences, University of California, San Francisco JoVE 54010 Bioengineering
Double Emulsion Generation Using a Polydimethylsiloxane (PDMS) Co-axial Flow Focus Device Russell H. Cole1, Tuan M. Tran2, Adam R. Abate3,4 1Department of Pharmaceutical Chemistry, University of California, San Francisco, 2Joint UCSF/UCB Bioengineering Graduate Group, University of California, San Francisco, 3Department of Bioengineering and Therapeutic Sciences, University of California, San Francisco, 4California Institute for Quantitative Biosciences, University of California, San Francisco JoVE 53516 Bioengineering
