Bradford W. Gibson

Publications

• The O-antigen and Core Carbohydrate of Vibrio Fischeri Lipopolysaccharide: Composition and Analysis of Their Role in Euprymna Scolopes Light Organ Colonization
  The Journal of Biological Chemistry. Jan, 2012  |   Pubmed ID: 22247546
• Proteomic Analysis of Age-dependent Changes in Protein Solubility Identifies Genes That Modulate Lifespan
  Aging Cell. Feb, 2012  |   Pubmed ID: 22103665
• Regulatory Control or Oxidative Damage? Proteomic Approaches to Interrogate the Role of Cysteine Oxidation Status in Biological Processes
  Molecular & Cellular Proteomics : MCP. Dec, 2011  |   Pubmed ID: 22159599
• Life Span Extension Via EIF4G Inhibition is Mediated by Posttranscriptional Remodeling of Stress Response Gene Expression in C. Elegans
  Cell Metabolism. Jul, 2011  |   Pubmed ID: 21723504
• Mass Spectrometric Identification of Novel Lysine Acetylation Sites in Huntingtin
  Molecular & Cellular Proteomics : MCP. Oct, 2011  |   Pubmed ID: 21685499
• N-acylethanolamine Signalling Mediates the Effect of Diet on Lifespan in Caenorhabditis Elegans
  Nature. May, 2011  |   Pubmed ID: 21562563
• Confident Identification of 3-nitrotyrosine Modifications in Mass Spectral Data Across Multiple Mass Spectrometry Platforms
  Journal of Proteomics. Oct, 2011  |   Pubmed ID: 21514405
• The Lipid A from Vibrio Fischeri Lipopolysaccharide: a Unique Structure Bearing a Phosphoglycerol Moiety
  The Journal of Biological Chemistry. Jun, 2011  |   Pubmed ID: 21498521
• Quantitative Mapping of Reversible Mitochondrial Complex I Cysteine Oxidation in a Parkinson Disease Mouse Model
  The Journal of Biological Chemistry. Mar, 2011  |   Pubmed ID: 21196577
• A Lectin Affinity Workflow Targeting Glycosite-specific, Cancer-related Carbohydrate Structures in Trypsin-digested Human Plasma
  Analytical Biochemistry. Jan, 2011  |   Pubmed ID: 20705048
• Identification of New Modulators and Protein Alterations in Non-apoptotic Programmed Cell Death
  Journal of Cellular Biochemistry. Dec, 2010  |   Pubmed ID: 20830744
• Identification, Characterization and Immunogenicity of an O-antigen Capsular Polysaccharide of Francisella Tularensis
  PloS One. 2010  |   Pubmed ID: 20625403
• ErbB2 Trafficking and Degradation Associated with K48 and K63 Polyubiquitination
  Cancer Research. May, 2010  |   Pubmed ID: 20406983
• Targeted Quantitation of Site-specific Cysteine Oxidation in Endogenous Proteins Using a Differential Alkylation and Multiple Reaction Monitoring Mass Spectrometry Approach
  Molecular & Cellular Proteomics : MCP. Jul, 2010  |   Pubmed ID: 20233844
• Utilizing the O-antigen Lipopolysaccharide Biosynthesis Pathway in Escherichia Coli to Interrogate the Substrate Specificities of Exogenous Glycosyltransferase Genes in a Combinatorial Approach
  Glycobiology. Jun, 2010  |   Pubmed ID: 20208062
• Sweetening the Pot: Adding Glycosylation to the Biomarker Discovery Equation
  Clinical Chemistry. Feb, 2010  |   Pubmed ID: 19959616
• Repeatability and Reproducibility in Proteomic Identifications by Liquid Chromatography-tandem Mass Spectrometry
  Journal of Proteome Research. Feb, 2010  |   Pubmed ID: 19921851
• Interlaboratory Study Characterizing a Yeast Performance Standard for Benchmarking LC-MS Platform Performance
  Molecular & Cellular Proteomics : MCP. Feb, 2010  |   Pubmed ID: 19858499
• Performance Metrics for Liquid Chromatography-tandem Mass Spectrometry Systems in Proteomics Analyses
  Molecular & Cellular Proteomics : MCP. Feb, 2010  |   Pubmed ID: 19837981
• The Mycobacterium Bovis Bacille Calmette-Guerin Phagosome Proteome
  Molecular & Cellular Proteomics : MCP. Jan, 2010  |   Pubmed ID: 19815536
• Preferentially Increased Nitration of Alpha-synuclein at Tyrosine-39 in a Cellular Oxidative Model of Parkinson's Disease
  Analytical Chemistry. Sep, 2009  |   Pubmed ID: 19697948
• Calpain-1 Cleaves and Activates Caspase-7
  The Journal of Biological Chemistry. Sep, 2009  |   Pubmed ID: 19617626
• Multi-site Assessment of the Precision and Reproducibility of Multiple Reaction Monitoring-based Measurements of Proteins in Plasma
  Nature Biotechnology. Jul, 2009  |   Pubmed ID: 19561596
• IDPicker 2.0: Improved Protein Assembly with High Discrimination Peptide Identification Filtering
  Journal of Proteome Research. Aug, 2009  |   Pubmed ID: 19522537
• Systematic Mapping of Posttranslational Modifications in Human Estrogen Receptor-alpha with Emphasis on Novel Phosphorylation Sites
  Molecular & Cellular Proteomics : MCP. Mar, 2009  |   Pubmed ID: 18984578
• A Novel Serine Phosphorylation Site Detected in the N-terminal Domain of Estrogen Receptor Isolated from Human Breast Cancer Cells
  Journal of the American Society for Mass Spectrometry. May, 2008  |   Pubmed ID: 18367407
• Partial Acetylation of Lysine Residues Improves Intraprotein Cross-linking
  Analytical Chemistry. Feb, 2008  |   Pubmed ID: 18201069
• Characterization of HtrB and MsbB Mutants of the Light Organ Symbiont Vibrio Fischeri
  Applied and Environmental Microbiology. Feb, 2008  |   Pubmed ID: 18065606
• Characterization of the N-acetyl-5-neuraminic Acid-binding Site of the Extracytoplasmic Solute Receptor (SiaP) of Nontypeable Haemophilus Influenzae Strain 2019
  The Journal of Biological Chemistry. Jan, 2008  |   Pubmed ID: 17947229
• Regulation of Sialic Acid Transport and Catabolism in Haemophilus Influenzae
  Molecular Microbiology. Oct, 2007  |   Pubmed ID: 17880422
• Identification of LpxL, a Late Acyltransferase of Francisella Tularensis
  Infection and Immunity. Nov, 2007  |   Pubmed ID: 17724076
• Proteomic Analysis of Plasma Membrane and Secretory Vesicles from Human Neutrophils
  Proteome Science. 2007  |   Pubmed ID: 17692124
• Proposed Second Class of Haemophilus Ducreyi Strains Show Altered Protein and Lipooligosaccharide Profiles
  Proteomics. Sep, 2007  |   Pubmed ID: 17676659
• Small-scale Immunopurification of Cytochrome C Oxidase for a High-throughput Multiplexing Analysis of Enzyme Activity and Amount
  Biotechnology and Applied Biochemistry. Dec, 2007  |   Pubmed ID: 17508937
• Quantification of Cysteine Oxidation in Human Estrogen Receptor by Mass Spectrometry
  Analytical Chemistry. Apr, 2007  |   Pubmed ID: 17373775
• Characterization of Lipid A Acylation Patterns in Francisella Tularensis, Francisella Novicida, and Francisella Philomiragia Using Multiple-stage Mass Spectrometry and Matrix-assisted Laser Desorption/ionization on an Intermediate Vacuum Source Linear Ion Trap
  Analytical Chemistry. Feb, 2007  |   Pubmed ID: 17263332
• Identification of Genes Involved in the Expression of Atypical Lipooligosaccharide Structures from a Second Class of Haemophilus Ducreyi
  Infection and Immunity. Jan, 2007  |   Pubmed ID: 17030566
• Novel Pathways Associated with Quinone-induced Stress in Breast Cancer Cells
  Drug Metabolism Reviews. 2006  |   Pubmed ID: 17145690
• Role of LgtC in Resistance of Nontypeable Haemophilus Influenzae Strain R2866 to Human Serum
  Infection and Immunity. Nov, 2006  |   Pubmed ID: 16966407
• DAF-12-dependent Rescue of Dauer Formation in Caenorhabditis Elegans by (25S)-cholestenoic Acid
  Aging Cell. Aug, 2006  |   Pubmed ID: 16913876
• Huntingtin Phosphorylation Sites Mapped by Mass Spectrometry. Modulation of Cleavage and Toxicity
  The Journal of Biological Chemistry. Aug, 2006  |   Pubmed ID: 16782707
• Stable Isotope Metabolic Labeling of Neisseria Meningitidis Lipooligosaccharide
  Journal of Endotoxin Research. 2006  |   Pubmed ID: 16690012
• Proteomic Analysis of Succinate Dehydrogenase and Ubiquinol-cytochrome C Reductase (Complex II and III) Isolated by Immunoprecipitation from Bovine and Mouse Heart Mitochondria
  Biochimica Et Biophysica Acta. Feb, 2006  |   Pubmed ID: 16120479
• Identification of a Novel Sialic Acid Transporter in Haemophilus Ducreyi
  Infection and Immunity. Oct, 2005  |   Pubmed ID: 16177350
• Novel Sialic Acid Transporter of Haemophilus Influenzae
  Infection and Immunity. Sep, 2005  |   Pubmed ID: 16113244
• Biochemical and Functional Characterization of Membrane Blebs Purified from Neisseria Meningitidis Serogroup B
  The Journal of Biological Chemistry. Nov, 2005  |   Pubmed ID: 16103114
• Mass Spectrometric Identification of a Novel Phosphorylation Site in Subunit NDUFA10 of Bovine Mitochondrial Complex I
  FEBS Letters. Apr, 2005  |   Pubmed ID: 15848193
• Characterization of a Cluster of Three Glycosyltransferase Enzymes Essential for Moraxella Catarrhalis Lipooligosaccharide Assembly
  Journal of Bacteriology. May, 2005  |   Pubmed ID: 15838019
• The Human Mitochondrial Proteome: Oxidative Stress, Protein Modifications and Oxidative Phosphorylation
  The International Journal of Biochemistry & Cell Biology. May, 2005  |   Pubmed ID: 15743667
• Rapid Purification and Mass Spectrometric Characterization of Mitochondrial NADH Dehydrogenase (Complex I) from Rodent Brain and a Dopaminergic Neuronal Cell Line
  Molecular & Cellular Proteomics : MCP. Jan, 2005  |   Pubmed ID: 15591592
• Lipophilic Regulator of a Developmental Switch in Caenorhabditis Elegans
  Aging Cell. Dec, 2004  |   Pubmed ID: 15569358
• Novel Modification of Lipid A of Francisella Tularensis
  Infection and Immunity. Sep, 2004  |   Pubmed ID: 15322031
• Matrix-assisted Laser Desorption/ionization-time of Flight-mass Spectrometry of Lipopolysaccharide Species Separated by Slab-polyacrylamide Gel Electrophoresis: High-resolution Separation and Molecular Weight Determination of Lipooligosaccharides from Vibrio Fischeri Strain HMK
  Electrophoresis. Jul, 2004  |   Pubmed ID: 15273999
• Expanded Coverage of the Human Heart Mitochondrial Proteome Using Multidimensional Liquid Chromatography Coupled with Tandem Mass Spectrometry
  Journal of Proteome Research. May-Jun, 2004  |   Pubmed ID: 15253431
• Exploiting Proteomics in the Discovery of Drugs That Target Mitochondrial Oxidative Damage
  Science of Aging Knowledge Environment : SAGE KE. Mar, 2004  |   Pubmed ID: 15028863
• Proteomic and Immunochemical Characterization of a Role for Stathmin in Adult Neurogenesis
  FASEB Journal : Official Publication of the Federation of American Societies for Experimental Biology. Feb, 2004  |   Pubmed ID: 14769823
• The Streptococcus Gordonii Platelet Binding Protein GspB Undergoes Glycosylation Independently of Export
  Journal of Bacteriology. Feb, 2004  |   Pubmed ID: 14729688
• Molecular Components of a Cell Death Pathway Activated by Endoplasmic Reticulum Stress
  The Journal of Biological Chemistry. Jan, 2004  |   Pubmed ID: 14561754
• Proteome of Haemophilus Ducreyi by 2-D SDS-PAGE and Mass Spectrometry: Strain Variation, Virulence, and Carbohydrate Expression
  Journal of Proteome Research. Sep-Oct, 2003  |   Pubmed ID: 14582649
• Identification of a 3-deoxy-D-manno-octulosonic Acid Biosynthetic Operon in Moraxella Catarrhalis and Analysis of a KdsA-deficient Isogenic Mutant
  Infection and Immunity. Nov, 2003  |   Pubmed ID: 14573664
• Phosphospecific Proteolysis for Mapping Sites of Protein Phosphorylation
  Nature Biotechnology. Sep, 2003  |   Pubmed ID: 12923550
• MS2Assign, Automated Assignment and Nomenclature of Tandem Mass Spectra of Chemically Crosslinked Peptides
  Journal of the American Society for Mass Spectrometry. Aug, 2003  |   Pubmed ID: 12892908
• Primary Sequence Characterization of Catestatin Intermediates and Peptides Defines Proteolytic Cleavage Sites Utilized for Converting Chromogranin a into Active Catestatin Secreted from Neuroendocrine Chromaffin Cells
  Biochemistry. Jun, 2003  |   Pubmed ID: 12795588
• Metabolic Incorporation of Unnatural Sialic Acids into Haemophilus Ducreyi Lipooligosaccharides
  Proceedings of the National Academy of Sciences of the United States of America. Mar, 2003  |   Pubmed ID: 12615992
• Characterization of the Human Heart Mitochondrial Proteome
  Nature Biotechnology. Mar, 2003  |   Pubmed ID: 12592411
• The MsbB Mutant of Neisseria Meningitidis Strain NMB Has a Defect in Lipooligosaccharide Assembly and Transport to the Outer Membrane
  Infection and Immunity. Feb, 2003  |   Pubmed ID: 12540541
• An Alternative Strategy to Determine the Mitochondrial Proteome Using Sucrose Gradient Fractionation and 1D PAGE on Highly Purified Human Heart Mitochondria
  Journal of Proteome Research. Sep-Oct, 2002  |   Pubmed ID: 12645917
• Identification and Characterization of the N-acetylglucosamine Glycosyltransferase Gene of Haemophilus Ducreyi
  Infection and Immunity. Oct, 2002  |   Pubmed ID: 12228324
• Characterization of Lipooligosaccharides from Haemophilus Ducreyi Containing Polylactosamine Repeats
  Journal of the American Society for Mass Spectrometry. Jun, 2002  |   Pubmed ID: 12056572
• The LbgAB Gene Cluster of Haemophilus Ducreyi Encodes a Beta-1,4-galactosyltransferase and an Alpha-1,6-DD-heptosyltransferase Involved in Lipooligosaccharide Biosynthesis
  Infection and Immunity. Jun, 2002  |   Pubmed ID: 12010972
• Haemophilus Influenzae Type B Strain A2 Has Multiple Sialyltransferases Involved in Lipooligosaccharide Sialylation
  The Journal of Biological Chemistry. Apr, 2002  |   Pubmed ID: 11842084
• Intracellular Survival of Neisseria Gonorrhoeae in Male Urethral Epithelial Cells: Importance of a Hexaacyl Lipid A
  Infection and Immunity. Feb, 2002  |   Pubmed ID: 11796626