Christopher E. Mason Department of Physiology and Biophysics Weill Cornell Medical College Biography Publications Institution JoVE Articles Christopher E. Mason has not added a biography. If you are Christopher E. Mason and would like to personalize this page please email our Author Liaison for assistance. Publications MiR-29a Maintains Mouse Hematopoietic Stem Cell Self-renewal by Regulating Dnmt3a Blood. Jan, 2015 | Pubmed ID: 25634742 Tissue-specific Transcriptome Sequencing Analysis Expands the Non-human Primate Reference Transcriptome Resource (NHPRTR) Nucleic Acids Research. Jan, 2015 | Pubmed ID: 25392405 Comparative Exomics of Phalaris Cultivars Under Salt Stress BMC Genomics. Oct, 2014 | Pubmed ID: 25573273 An Integrative Computational Approach for Prioritization of Genomic Variants PloS One. 2014 | Pubmed ID: 25506935 DNA Hydroxymethylation Profiling Reveals That WT1 Mutations Result in Loss of TET2 Function in Acute Myeloid Leukemia Cell Reports. Dec, 2014 | Pubmed ID: 25482556 Genomation: a Toolkit to Summarize, Annotate and Visualize Genomic Intervals Bioinformatics (Oxford, England). Nov, 2014 | Pubmed ID: 25417204 Enabling Large-scale Next-generation Sequence Assembly with Blacklight Concurrency and Computation : Practice & Experience. Sep, 2014 | Pubmed ID: 25294974 Dynamic Evolution of Clonal Epialleles Revealed by Methclone Genome Biology. Sep, 2014 | Pubmed ID: 25260792 Assessing Technical Performance in Differential Gene Expression Experiments with External Spike-in RNA Control Ratio Mixtures Nature Communications. 2014 | Pubmed ID: 25254650 Detecting and Correcting Systematic Variation in Large-scale RNA Sequencing Data Nature Biotechnology. Sep, 2014 | Pubmed ID: 25150837 Multi-platform Assessment of Transcriptome Profiling Using RNA-seq in the ABRF Next-generation Sequencing Study Nature Biotechnology. Sep, 2014 | Pubmed ID: 25150835 Cell-cycle Reprogramming for PI3K Inhibition Overrides a Relapse-specific C481S BTK Mutation Revealed by Longitudinal Functional Genomics in Mantle Cell Lymphoma Cancer Discovery. Sep, 2014 | Pubmed ID: 25082755 The Pivotal Regulatory Landscape of RNA Modifications Annual Review of Genomics and Human Genetics. 2014 | Pubmed ID: 24898039 Assessment and Improvement of Indian-origin Rhesus Macaque and Mauritian-origin Cynomolgus Macaque Genome Annotations Using Deep Transcriptome Sequencing Data Journal of Medical Primatology. Oct, 2014 | Pubmed ID: 24810475 A Rat RNA-Seq Transcriptomic BodyMap Across 11 Organs and 4 Developmental Stages Nature Communications. 2014 | Pubmed ID: 24510058 Characterizing Multi-omic Data in Systems Biology Advances in Experimental Medicine and Biology. 2014 | Pubmed ID: 24292960 Deletion of Asxl1 Results in Myelodysplasia and Severe Developmental Defects in Vivo The Journal of Experimental Medicine. Nov, 2013 | Pubmed ID: 24218140 Identification of Kinase Fusion Oncogenes in Post-Chernobyl Radiation-induced Thyroid Cancers The Journal of Clinical Investigation. Nov, 2013 | Pubmed ID: 24135138 Crowdfunding Genomics and Bioinformatics Genome Biology. 2013 | Pubmed ID: 24079746 Induction of Sarcomas by Mutant IDH2 Genes & Development. Sep, 2013 | Pubmed ID: 24065766 Comprehensive Evaluation of Differential Gene Expression Analysis Methods for RNA-seq Data Genome Biology. 2013 | Pubmed ID: 24020486 A Hybrid Mechanism of Action for BCL6 in B Cells Defined by Formation of Functionally Distinct Complexes at Enhancers and Promoters Cell Reports. Aug, 2013 | Pubmed ID: 23911289 Small Heat Shock Proteins Hspb7 and Hspb12 Regulate Early Steps of Cardiac Morphogenesis Developmental Biology. Sep, 2013 | Pubmed ID: 23850773 An Optimized Algorithm for Detecting and Annotating Regional Differential Methylation BMC Bioinformatics. 2013 | Pubmed ID: 23735126 Induction of Prolonged Early G1 Arrest by CDK4/CDK6 Inhibition Reprograms Lymphoma Cells for Durable PI3Kδ Inhibition Through PIK3IP1 Cell Cycle (Georgetown, Tex.). Jun, 2013 | Pubmed ID: 23676220 Pervasive Sequence Patents Cover the Entire Human Genome Genome Medicine. 2013 | Pubmed ID: 23522065 Novel RNA Regulatory Mechanisms Revealed in the Epitranscriptome RNA Biology. Feb, 2013 | Pubmed ID: 23434792 Relapse-specific Mutations in NT5C2 in Childhood Acute Lymphoblastic Leukemia Nature Genetics. Mar, 2013 | Pubmed ID: 23377183 Two Methods for Full-length RNA Sequencing for Low Quantities of Cells and Single Cells Proceedings of the National Academy of Sciences of the United States of America. Jan, 2013 | Pubmed ID: 23267071 The Non-human Primate Reference Transcriptome Resource (NHPRTR) for Comparative Functional Genomics Nucleic Acids Research. Jan, 2013 | Pubmed ID: 23203872 The Birth of the Epitranscriptome: Deciphering the Function of RNA Modifications Genome Biology. 2012 | Pubmed ID: 23113984 MethylKit: a Comprehensive R Package for the Analysis of Genome-wide DNA Methylation Profiles Genome Biology. Oct, 2012 | Pubmed ID: 23034086 Recurrent Somatic TET2 Mutations in Normal Elderly Individuals with Clonal Hematopoiesis Nature Genetics. Nov, 2012 | Pubmed ID: 23001125 Limitations of the Human Reference Genome for Personalized Genomics PloS One. 2012 | Pubmed ID: 22811759 Base-pair Resolution DNA Methylation Sequencing Reveals Profoundly Divergent Epigenetic Landscapes in Acute Myeloid Leukemia PLoS Genetics. 2012 | Pubmed ID: 22737091 Comprehensive Analysis of MRNA Methylation Reveals Enrichment in 3' UTRs and Near Stop Codons Cell. Jun, 2012 | Pubmed ID: 22608085 Faster Sequencers, Larger Datasets, New Challenges Genome Biology. 2012 | Pubmed ID: 22452984 Detecting False-positive Signals in Exome Sequencing Human Mutation. Apr, 2012 | Pubmed ID: 22294350 A Genome Sequence Resource for the Aye-aye (Daubentonia Madagascariensis), a Nocturnal Lemur from Madagascar Genome Biology and Evolution. 2012 | Pubmed ID: 22155688 Multiple Recurrent De Novo CNVs, Including Duplications of the 7q11.23 Williams Syndrome Region, Are Strongly Associated with Autism Neuron. Jun, 2011 | Pubmed ID: 21658581 Standardizing the Next Generation of Bioinformatics Software Development with BioHDF (HDF5) Advances in Experimental Medicine and Biology. 2010 | Pubmed ID: 20865556 L-histidine Decarboxylase and Tourette's Syndrome The New England Journal of Medicine. May, 2010 | Pubmed ID: 20445167 Location Analysis for the Estrogen Receptor-alpha Reveals Binding to Diverse ERE Sequences and Widespread Binding Within Repetitive DNA Elements Nucleic Acids Research. Apr, 2010 | Pubmed ID: 20047966 The Syndrome of Pachygyria, Mental Retardation, and Arachnoid Cysts Maps to 11p15 American Journal of Medical Genetics. Part A. Nov, 2009 | Pubmed ID: 19876906 Functional and Evolutionary Insights into Human Brain Development Through Global Transcriptome Analysis Neuron. May, 2009 | Pubmed ID: 19477152 Genomic Mapping of Binding Regions for the Ecdysone Receptor Protein Complex Genome Research. Jun, 2009 | Pubmed ID: 19237466 Susceptibility Loci for Intracranial Aneurysm in European and Japanese Populations Nature Genetics. Dec, 2008 | Pubmed ID: 18997786 Molecular Characterization of a Patient with 3p Deletion Syndrome and a Review of the Literature American Journal of Medical Genetics. Part A. Nov, 2008 | Pubmed ID: 18837054 Developmental Stage and Level of Codon Usage Bias in Drosophila Molecular Biology and Evolution. Nov, 2008 | Pubmed ID: 18755761 RNA-seq: an Assessment of Technical Reproducibility and Comparison with Gene Expression Arrays Genome Research. Sep, 2008 | Pubmed ID: 18550803 Genomic Analysis of Estrogen Cascade Reveals Histone Variant H2A.Z Associated with Breast Cancer Progression Molecular Systems Biology. 2008 | Pubmed ID: 18414489 Novel NTRK1 Mutations Cause Hereditary Sensory and Autonomic Neuropathy Type IV: Demonstration of a Founder Mutation in the Turkish Population Neurogenetics. May, 2008 | Pubmed ID: 18322713 Personalized Genomic Medicine with a Patchwork, Partially Owned Genome The Yale Journal of Biology and Medicine. Dec, 2007 | Pubmed ID: 18449389 Rapid Identification of Disease-causing Mutations Using Copy Number Analysis Within Linkage Intervals Human Mutation. Dec, 2007 | Pubmed ID: 17676595 Identification of Tightly Regulated Groups of Genes During Drosophila Melanogaster Embryogenesis Molecular Systems Biology. 2007 | Pubmed ID: 17224916 Enhanced Reduceret Repræsentation Bisulfite sekventering for Vurdering af DNA-methylering ved basepar Opløsning Francine E. Garrett-Bakelman*1, Caroline K. Sheridan*1, Thadeous J. Kacmarczyk1, Jennifer Ishii1, Doron Betel1,2, Alicia Alonso1, Christopher E. Mason3, Maria E. Figueroa4, Ari M. Melnick1 1Department of Medicine, Weill Cornell Medical College, 2Institute for Computational Biomedicine, Weill Cornell Medical College, 3Department of Physiology and Biophysics, Weill Cornell Medical College, 4Department of Pathology, University of Michigan Biology
Enhanced Reduceret Repræsentation Bisulfite sekventering for Vurdering af DNA-methylering ved basepar Opløsning Francine E. Garrett-Bakelman*1, Caroline K. Sheridan*1, Thadeous J. Kacmarczyk1, Jennifer Ishii1, Doron Betel1,2, Alicia Alonso1, Christopher E. Mason3, Maria E. Figueroa4, Ari M. Melnick1 1Department of Medicine, Weill Cornell Medical College, 2Institute for Computational Biomedicine, Weill Cornell Medical College, 3Department of Physiology and Biophysics, Weill Cornell Medical College, 4Department of Pathology, University of Michigan Biology
