Doron Betel

Publications

• Comprehensive Evaluation of Differential Gene Expression Analysis Methods for RNA-seq Data
  Genome Biology. 2013  |   Pubmed ID: 24020486
• Genome-wide Identification of MiRNA Targets by PAR-CLIP
  Methods (San Diego, Calif.). Oct, 2012  |   Pubmed ID: 22926237
• The Expanding Role of MiR-302-367 in Pluripotency and Reprogramming
  Cell Cycle (Georgetown, Tex.). Apr, 2012  |   Pubmed ID: 22436490
• Neurophysiological Defects and Neuronal Gene Deregulation in Drosophila Mir-124 Mutants
  PLoS Genetics. Feb, 2012  |   Pubmed ID: 22347817
• Genome-wide Identification of MicroRNA Targets in Human ES Cells Reveals a Role for MiR-302 in Modulating BMP Response
  Genes & Development. Oct, 2011  |   Pubmed ID: 22012620
• Widespread Regulatory Activity of Vertebrate MicroRNA* Species
  RNA (New York, N.Y.). Feb, 2011  |   Pubmed ID: 21177881
• Comprehensive Modeling of MicroRNA Targets Predicts Functional Non-conserved and Non-canonical Sites
  Genome Biology. 2010  |   Pubmed ID: 20799968
• Genetic Dissection of the MiR-17~92 Cluster of MicroRNAs in Myc-induced B-cell Lymphomas
  Genes & Development. Dec, 2009  |   Pubmed ID: 20008931
• Characterization of Small RNAs in Aplysia Reveals a Role for MiR-124 in Constraining Synaptic Plasticity Through CREB
  Neuron. Sep, 2009  |   Pubmed ID: 19778509
• Transfection of Small RNAs Globally Perturbs Gene Regulation by Endogenous MicroRNAs
  Nature Biotechnology. Jun, 2009  |   Pubmed ID: 19465925
• The MicroRNA.org Resource: Targets and Expression
  Nucleic Acids Research. Jan, 2008  |   Pubmed ID: 18158296
• Computational Analysis of Mouse PiRNA Sequence and Biogenesis
  PLoS Computational Biology. Nov, 2007  |   Pubmed ID: 17997596
• Structure-templated Predictions of Novel Protein Interactions from Sequence Information
  PLoS Computational Biology. Sep, 2007  |   Pubmed ID: 17892321
• Analysis of Domain Correlations in Yeast Protein Complexes
  Bioinformatics (Oxford, England). Aug, 2004  |   Pubmed ID: 15262781
• BIND: the Biomolecular Interaction Network Database
  Nucleic Acids Research. Jan, 2003  |   Pubmed ID: 12519993
• SeqHound: Biological Sequence and Structure Database As a Platform for Bioinformatics Research
  BMC Bioinformatics. Oct, 2002  |   Pubmed ID: 12401134
• Kangaroo--a Pattern-matching Program for Biological Sequences
  BMC Bioinformatics. Jul, 2002  |   Pubmed ID: 12150718
• Mutation Profiling of Mismatch Repair-deficient Colorectal Cncers Using an in Silico Genome Scan to Identify Coding Microsatellites
  Cancer Research. Mar, 2002  |   Pubmed ID: 11888892
• Cloning and Expression of a Novel UDP-GlcNAc:alpha-D-mannoside Beta1,2-N-acetylglucosaminyltransferase Homologous to UDP-GlcNAc:alpha-3-D-mannoside Beta1,2-N-acetylglucosaminyltransferase I
  The Biochemical Journal. Jan, 2002  |   Pubmed ID: 11742540