Erich D. Jarvis Department of Neurobiology Duke University Biography Publications Institution JoVE Articles Erich D. Jarvis has not added a biography. If you are Erich D. Jarvis and would like to personalize this page please email our Author Liaison for assistance. Publications Olfactory Receptor Subgenomes Linked with Broad Ecological Adaptations in Sauropsida Molecular Biology and Evolution. Jul, 2015 | Pubmed ID: 26219582 A Refined Model of the Genomic Basis for Phenotypic Variation in Vertebrate Hemostasis BMC Evolutionary Biology. 2015 | Pubmed ID: 26123414 Core and Shell Song Systems Unique to the Parrot Brain PloS One. 2015 | Pubmed ID: 26107173 Genomics: Bird Sequencing Project Takes Off Nature. Jun, 2015 | Pubmed ID: 26040883 Male Mice Song Syntax Depends on Social Contexts and Influences Female Preferences Frontiers in Behavioral Neuroscience. 2015 | Pubmed ID: 25883559 Phylogenomic Analyses Data of the Avian Phylogenomics Project GigaScience. 2015 | Pubmed ID: 25741440 Convergent Differential Regulation of SLIT-ROBO Axon Guidance Genes in the Brains of Vocal Learners The Journal of Comparative Neurology. Apr, 2015 | Pubmed ID: 25424606 Two Antarctic Penguin Genomes Reveal Insights into Their Evolutionary History and Molecular Changes Related to the Antarctic Environment GigaScience. 2014 | Pubmed ID: 25671092 Comparative Genomic Data of the Avian Phylogenomics Project GigaScience. 2014 | Pubmed ID: 25671091 Maintenance and Neuronal Differentiation of Chicken Induced Pluripotent Stem-like Cells Stem Cells International. 2014 | Pubmed ID: 25610469 Evolutionary Genomics and Adaptive Evolution of the Hedgehog Gene Family (Shh, Ihh and Dhh) in Vertebrates PloS One. 2014 | Pubmed ID: 25549322 The Basal Ganglia Within a Cognitive System in Birds and Mammals The Behavioral and Brain Sciences. Dec, 2014 | Pubmed ID: 25514958 Convergent Transcriptional Specializations in the Brains of Humans and Song-learning Birds Science (New York, N.Y.). Dec, 2014 | Pubmed ID: 25504733 Core and Region-enriched Networks of Behaviorally Regulated Genes and the Singing Genome Science (New York, N.Y.). Dec, 2014 | Pubmed ID: 25504732 Three Crocodilian Genomes Reveal Ancestral Patterns of Evolution Among Archosaurs Science (New York, N.Y.). Dec, 2014 | Pubmed ID: 25504731 Evidence for a Single Loss of Mineralized Teeth in the Common Avian Ancestor Science (New York, N.Y.). Dec, 2014 | Pubmed ID: 25504730 Complex Evolutionary Trajectories of Sex Chromosomes Across Bird Taxa Science (New York, N.Y.). Dec, 2014 | Pubmed ID: 25504727 Whole-genome Analyses Resolve Early Branches in the Tree of Life of Modern Birds Science (New York, N.Y.). Dec, 2014 | Pubmed ID: 25504713 Comparative Genomics Reveals Insights into Avian Genome Evolution and Adaptation Science (New York, N.Y.). Dec, 2014 | Pubmed ID: 25504712 Avian Genomes. A Flock of Genomes. Introduction Science (New York, N.Y.). Dec, 2014 | Pubmed ID: 25504710 Genomic Signatures of Near-extinction and Rebirth of the Crested Ibis and Other Endangered Bird Species Genome Biology. 2014 | Pubmed ID: 25496777 Reconstruction of Gross Avian Genome Structure, Organization and Evolution Suggests That the Chicken Lineage Most Closely Resembles the Dinosaur Avian Ancestor BMC Genomics. 2014 | Pubmed ID: 25496766 Evidence for GC-biased Gene Conversion As a Driver of Between-lineage Differences in Avian Base Composition Genome Biology. 2014 | Pubmed ID: 25496599 Low Frequency of Paleoviral Infiltration Across the Avian Phylogeny Genome Biology. 2014 | Pubmed ID: 25496498 Dynamic Evolution of the Alpha (α) and Beta (β) Keratins Has Accompanied Integument Diversification and the Adaptation of Birds into Novel Lifestyles BMC Evolutionary Biology. 2014 | Pubmed ID: 25496280 Genomic Resources for the Endangered Hawaiian Honeycreepers BMC Genomics. 2014 | Pubmed ID: 25496081 Comparative Genomics Reveals Molecular Features Unique to the Songbird Lineage BMC Genomics. 2014 | Pubmed ID: 25494627 Basal Ganglia Function, Stuttering, Sequencing, and Repair in Adult Songbirds Scientific Reports. 2014 | Pubmed ID: 25307086 High-coverage Sequencing and Annotated Assemblies of the Budgerigar Genome GigaScience. 2014 | Pubmed ID: 25061512 NSF Workshop Report: Discovering General Principles of Nervous System Organization by Comparing Brain Maps Across Species Brain, Behavior and Evolution. 2014 | Pubmed ID: 24603302 NSF Workshop Report: Discovering General Principles of Nervous System Organization by Comparing Brain Maps Across Species The Journal of Comparative Neurology. May, 2014 | Pubmed ID: 24596113 Mammalian Genes Induce Partially Reprogrammed Pluripotent Stem Cells in Non-mammalian Vertebrate and Invertebrate Species ELife. 2013 | Pubmed ID: 24015354 Different Mechanisms Are Responsible for Dishabituation of Electrophysiological Auditory Responses to a Change in Acoustic Identity Than to a Change in Stimulus Location Neurobiology of Learning and Memory. Nov, 2013 | Pubmed ID: 23999220 Assemblathon 2: Evaluating De Novo Methods of Genome Assembly in Three Vertebrate Species GigaScience. 2013 | Pubmed ID: 23870653 Rudimentary Substrates for Vocal Learning in a Suboscine Nature Communications. 2013 | Pubmed ID: 23823977 Molecular Profiling of the Developing Avian Telencephalon: Regional Timing and Brain Subdivision Continuities The Journal of Comparative Neurology. Nov, 2013 | Pubmed ID: 23818174 Global View of the Functional Molecular Organization of the Avian Cerebrum: Mirror Images and Functional Columns The Journal of Comparative Neurology. Nov, 2013 | Pubmed ID: 23818122 Mouse Vocal Communication System: Are Ultrasounds Learned or Innate? Brain and Language. Jan, 2013 | Pubmed ID: 23295209 Of Mice, Birds, and Men: the Mouse Ultrasonic Song System Has Some Features Similar to Humans and Song-learning Birds PloS One. 2012 | Pubmed ID: 23071596 Birds, Primates, and Spoken Language Origins: Behavioral Phenotypes and Neurobiological Substrates Frontiers in Evolutionary Neuroscience. 2012 | Pubmed ID: 22912615 Specialized Motor-driven Dusp1 Expression in the Song Systems of Multiple Lineages of Vocal Learning Birds PloS One. 2012 | Pubmed ID: 22876306 Interspecies Avian Brain Chimeras Reveal That Large Brain Size Differences Are Influenced by Cell-interdependent Processes PloS One. 2012 | Pubmed ID: 22860132 Hybrid Error Correction and De Novo Assembly of Single-molecule Sequencing Reads Nature Biotechnology. Jul, 2012 | Pubmed ID: 22750884 Sequencing Three Crocodilian Genomes to Illuminate the Evolution of Archosaurs and Amniotes Genome Biology. Jan, 2012 | Pubmed ID: 22293439 Dopamine Regulation of Human Speech and Bird Song: A Critical Review Brain and Language. Jan, 2012 | Pubmed ID: 22284300 Convergent Differential Regulation of Parvalbumin in the Brains of Vocal Learners PloS One. 2012 | Pubmed ID: 22238614 Dynamic Evolution of Base Composition: Causes and Consequences in Avian Phylogenomics Molecular Biology and Evolution. Aug, 2011 | Pubmed ID: 21393604 Microproteomics: Quantitative Proteomic Profiling of Small Numbers of Laser-captured Cells Cold Spring Harbor Protocols. Feb, 2011 | Pubmed ID: 21285273 Night-time Neuronal Activation of Cluster N in a Day- and Night-migrating Songbird The European Journal of Neuroscience. Aug, 2010 | Pubmed ID: 20618826 Obtaining MtDNA Genomes from Next-generation Transcriptome Sequencing: a Case Study on the Basal Passerida (Aves: Passeriformes) Phylogeny Molecular Phylogenetics and Evolution. Oct, 2010 | Pubmed ID: 20601014 The Dusp1 Immediate Early Gene is Regulated by Natural Stimuli Predominantly in Sensory Input Neurons The Journal of Comparative Neurology. Jul, 2010 | Pubmed ID: 20506480 The Genome of a Songbird Nature. Apr, 2010 | Pubmed ID: 20360741 Comparative Genomics Based on Massive Parallel Transcriptome Sequencing Reveals Patterns of Substitution and Selection Across 10 Bird Species Molecular Ecology. Mar, 2010 | Pubmed ID: 20331785 Dopamine Receptors in a Songbird Brain The Journal of Comparative Neurology. Mar, 2010 | Pubmed ID: 20058221 Assessing Visual Requirements for Social Context-dependent Activation of the Songbird Song System Proceedings. Biological Sciences / The Royal Society. Jan, 2009 | Pubmed ID: 18826930 Early Onset of Deafening-induced Song Deterioration and Differential Requirements of the Pallial-basal Ganglia Vocal Pathway The European Journal of Neuroscience. Dec, 2008 | Pubmed ID: 19087177 Profiling of Experience-regulated Proteins in the Songbird Auditory Forebrain Using Quantitative Proteomics The European Journal of Neuroscience. Mar, 2008 | Pubmed ID: 18364021 Molecular Mapping of Movement-associated Areas in the Avian Brain: a Motor Theory for Vocal Learning Origin PloS One. 2008 | Pubmed ID: 18335043 Neural Systems for Vocal Learning in Birds and Humans: a Synopsis Journal of Ornithology / DO-G. Dec, 2007 | Pubmed ID: 19684872 Role of the Midbrain Dopaminergic System in Modulation of Vocal Brain Activation by Social Context The European Journal of Neuroscience. Jun, 2007 | Pubmed ID: 17553009 The Pallial Basal Ganglia Pathway Modulates the Behaviorally Driven Gene Expression of the Motor Pathway The European Journal of Neuroscience. Apr, 2007 | Pubmed ID: 17419760 Lateralized Activation of Cluster N in the Brains of Migratory Songbirds The European Journal of Neuroscience. Feb, 2007 | Pubmed ID: 17331212 VOCALIZATIONS AND ASSOCIATED BEHAVIORS OF THE SOMBRE HUMMINGBIRD (APHANTOCHROA CIRRHOCHLORIS) AND THE RUFOUS-BREASTED HERMIT (GLAUCIS HIRSUTUS) The Auk. Oct, 2006 | Pubmed ID: 18802498 Computational Inference of Neural Information Flow Networks PLoS Computational Biology. Nov, 2006 | Pubmed ID: 17121460 A Molecular Neuroethological Approach for Identifying and Characterizing a Cascade of Behaviorally Regulated Genes Proceedings of the National Academy of Sciences of the United States of America. Oct, 2006 | Pubmed ID: 17018643 Social Context-dependent Singing-regulated Dopamine The Journal of Neuroscience : the Official Journal of the Society for Neuroscience. Aug, 2006 | Pubmed ID: 16943558 Rapid Behavioral and Genomic Responses to Social Opportunity PLoS Biology. Nov, 2005 | Pubmed ID: 16216088 Night-vision Brain Area in Migratory Songbirds Proceedings of the National Academy of Sciences of the United States of America. Jun, 2005 | Pubmed ID: 15928090 Avian Brains and a New Understanding of Vertebrate Brain Evolution Nature Reviews. Neuroscience. Feb, 2005 | Pubmed ID: 15685220 The Avian Brain Nomenclature Forum: Terminology for a New Century in Comparative Neuroanatomy The Journal of Comparative Neurology. 2004 | Pubmed ID: 19626136 Learned Birdsong and the Neurobiology of Human Language Annals of the New York Academy of Sciences. Jun, 2004 | Pubmed ID: 15313804 Songbirds and the Revised Avian Brain Nomenclature Annals of the New York Academy of Sciences. Jun, 2004 | Pubmed ID: 15313771 Advances to Bayesian Network Inference for Generating Causal Networks from Observational Biological Data Bioinformatics (Oxford, England). Dec, 2004 | Pubmed ID: 15284094 Differential Expression of Glutamate Receptors in Avian Neural Pathways for Learned Vocalization The Journal of Comparative Neurology. Aug, 2004 | Pubmed ID: 15236466 Revised Nomenclature for Avian Telencephalon and Some Related Brainstem Nuclei The Journal of Comparative Neurology. May, 2004 | Pubmed ID: 15116397 Analysis of the Mouse Transcriptome for Genes Involved in the Function of the Nervous System Genome Research. Jun, 2003 | Pubmed ID: 12819138 Influence of Network Topology and Data Collection on Network Inference Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing. 2003 | Pubmed ID: 12603026 Induction of Hippocampal Long-term Potentiation During Waking Leads to Increased Extrahippocampal Zif-268 Expression During Ensuing Rapid-eye-movement Sleep The Journal of Neuroscience : the Official Journal of the Society for Neuroscience. Dec, 2002 | Pubmed ID: 12486186 Evaluating Functional Network Inference Using Simulations of Complex Biological Systems Bioinformatics (Oxford, England). 2002 | Pubmed ID: 12169550 Eliciting and Analyzing Male Mouse Ultrasonic Vocalization (USV) Songs Jonathan Chabout1,2, Joshua Jones-Macopson1, Erich D. Jarvis1,2,3 1Department of Neurobiology, Duke University, 2Howard Hughes Medical Institute, 3The Rockefeller University JoVE 54137 Behavior Transsynaptic Tracing from Peripheral Targets with Pseudorabies Virus Followed by Cholera Toxin and Biotinylated Dextran Amines Double Labeling Gustavo Arriaga1, Joshua J. Macopson1, Erich D. Jarvis1,2 1Department of Neurobiology, Duke University Medical Center, 2Howard Hughes Medical Institute JoVE 50672 Neuroscience Radioactive in situ Hybridization for Detecting Diverse Gene Expression Patterns in Tissue Chun-Chun Chen1, Kazuhiro Wada2, Erich D. Jarvis1 1Howard Hughes Medical Institute, Department of Neurobiology, Duke University, 2Department of Biological Sciences, Hokkaido University JoVE 3764 Biology
Eliciting and Analyzing Male Mouse Ultrasonic Vocalization (USV) Songs Jonathan Chabout1,2, Joshua Jones-Macopson1, Erich D. Jarvis1,2,3 1Department of Neurobiology, Duke University, 2Howard Hughes Medical Institute, 3The Rockefeller University JoVE 54137 Behavior
Transsynaptic Tracing from Peripheral Targets with Pseudorabies Virus Followed by Cholera Toxin and Biotinylated Dextran Amines Double Labeling Gustavo Arriaga1, Joshua J. Macopson1, Erich D. Jarvis1,2 1Department of Neurobiology, Duke University Medical Center, 2Howard Hughes Medical Institute JoVE 50672 Neuroscience
Radioactive in situ Hybridization for Detecting Diverse Gene Expression Patterns in Tissue Chun-Chun Chen1, Kazuhiro Wada2, Erich D. Jarvis1 1Howard Hughes Medical Institute, Department of Neurobiology, Duke University, 2Department of Biological Sciences, Hokkaido University JoVE 3764 Biology