Ernesto S. Nakayasu

Publications

• Concentration-dependent Protein Loading of Extracellular Vesicles Released by Histoplasma Capsulatum After Antibody Treatment and Its Modulatory Action Upon Macrophages
  Scientific Reports. May, 2018  |   Pubmed ID: 29795301
• QC-ART: A Tool for Real-time Quality Control Assessment of Mass Spectrometry-based Proteomics Data
  Molecular & Cellular Proteomics : MCP. 04, 2018  |   Pubmed ID: 29666158
• Ancient Regulatory Role of Lysine Acetylation in Central Metabolism
  MBio. Nov, 2017  |   Pubmed ID: 29184018
• Genes Essential for Phototrophic Growth by a Purple Alphaproteobacterium
  Environmental Microbiology. Sep, 2017  |   Pubmed ID: 28677146
• Sexual Dimorphism in the Fetal Cardiac Response to Maternal Nutrient Restriction
  Journal of Molecular and Cellular Cardiology. Jul, 2017  |   Pubmed ID: 28641979
• The Plasmodium Falciparum Exported Protein PF3D7_0402000 Binds to Erythrocyte Ankyrin and Band 4.1
  Molecular and Biochemical Parasitology. Sep, 2017  |   Pubmed ID: 28627360
• A Unique Deubiquitinase That Deconjugates Phosphoribosyl-linked Protein Ubiquitination
  Cell Research. Jul, 2017  |   Pubmed ID: 28497808
• A Legionella Effector Disrupts Host Cytoskeletal Structure by Cleaving Actin
  PLoS Pathogens. Jan, 2017  |   Pubmed ID: 28129393
• MPLEx: a Method for Simultaneous Pathogen Inactivation and Extraction of Samples for Multi-omics Profiling
  The Analyst. Jan, 2017  |   Pubmed ID: 28091625
• Identification of Novel Host Interactors of Effectors Secreted by and
  MSystems. Jul-Aug, 2016  |   Pubmed ID: 27822540
• MPLEx: a Robust and Universal Protocol for Single-Sample Integrative Proteomic, Metabolomic, and Lipidomic Analyses
  MSystems. May-Jun, 2016  |   Pubmed ID: 27822525
• Antibody Binding Alters the Characteristics and Contents of Extracellular Vesicles Released by Histoplasma Capsulatum
  MSphere. Mar-Apr, 2016  |   Pubmed ID: 27303729
• Ubiquitination Independent of E1 and E2 Enzymes by Bacterial Effectors
  Nature. May, 2016  |   Pubmed ID: 27049943
• Extracellular Vesicles from Trypanosoma Brucei Mediate Virulence Factor Transfer and Cause Host Anemia
  Cell. Jan, 2016  |   Pubmed ID: 26771494
• Multicopy Single-Stranded DNA Directs Intestinal Colonization of Enteric Pathogens
  PLoS Genetics. Sep, 2015  |   Pubmed ID: 26367458
• Identification of Salmonella Typhimurium Deubiquitinase SseL Substrates by Immunoaffinity Enrichment and Quantitative Proteomic Analysis
  Journal of Proteome Research. Sep, 2015  |   Pubmed ID: 26147956
• Analysis of the Salmonella Regulatory Network Suggests Involvement of SsrB and H-NS in σ(E)-regulated SPI-2 Gene Expression
  Frontiers in Microbiology. 2015  |   Pubmed ID: 25713562
• Global Analysis of Salmonella Alternative Sigma Factor E on Protein Translation
  Journal of Proteome Research. Apr, 2015  |   Pubmed ID: 25686268
• A Method to Determine Lysine Acetylation Stoichiometries
  International Journal of Proteomics. 2014  |   Pubmed ID: 25143833
• Cytomegalovirus Pp65 Limits Dissemination but is Dispensable for Persistence
  The Journal of Clinical Investigation. May, 2014  |   Pubmed ID: 24691437
• The Impact of Proteomics on the Understanding of Functions and Biogenesis of Fungal Extracellular Vesicles
  Journal of Proteomics. Jan, 2014  |   Pubmed ID: 23583696
• Comparative Phosphoproteomics Reveals Components of Host Cell Invasion and Post-transcriptional Regulation During Francisella Infection
  Molecular & Cellular Proteomics : MCP. Nov, 2013  |   Pubmed ID: 23970565
• Top-down Proteomics Reveals a Unique Protein S-thiolation Switch in Salmonella Typhimurium in Response to Infection-like Conditions
  Proceedings of the National Academy of Sciences of the United States of America. Jun, 2013  |   Pubmed ID: 23720318
• Evaluation of Selected Binding Domains for the Analysis of Ubiquitinated Proteomes
  Journal of the American Society for Mass Spectrometry. Aug, 2013  |   Pubmed ID: 23649778
• Multi-omic Data Integration Links Deleted in Breast Cancer 1 (DBC1) Degradation to Chromatin Remodeling in Inflammatory Response
  Molecular & Cellular Proteomics : MCP. Aug, 2013  |   Pubmed ID: 23639857
• Studying Salmonellae and Yersiniae Host-pathogen Interactions Using Integrated 'omics and Modeling
  Current Topics in Microbiology and Immunology. 2013  |   Pubmed ID: 22886542
• Reevaluation of the Coding Potential and Proteomic Analysis of the BAC-derived Rhesus Cytomegalovirus Strain 68-1
  Journal of Virology. Sep, 2012  |   Pubmed ID: 22718821
• Label-free Quantitative Proteomics Reveals Differentially Regulated Proteins in the Latex of Sticky Diseased Carica Papaya L. Plants
  Journal of Proteomics. Jun, 2012  |   Pubmed ID: 22465191
• Technologies and Approaches to Elucidate and Model the Virulence Program of Salmonella
  Frontiers in Microbiology. 2011  |   Pubmed ID: 21687430
• Histoplasma Capsulatum Heat-shock 60 Orchestrates the Adaptation of the Fungus to Temperature Stress
  PloS One. Feb, 2011  |   Pubmed ID: 21347364