Ligeng Ma

Publications

• Polycomb Group Proteins RING1A and RING1B Regulate the Vegetative Phase Transition in Arabidopsis
  Frontiers in Plant Science. 2017  |   Pubmed ID: 28596781
• Alternative Splicing in Plant Genes: A Means of Regulating the Environmental Fitness of Plants
  International Journal of Molecular Sciences. Feb, 2017  |   Pubmed ID: 28230724
• NatA is Required for Suspensor Development in Arabidopsis
  Plant Signaling & Behavior. Oct, 2016  |   Pubmed ID: 27610925
• Protein N-terminal Acetylation is Required for Embryogenesis in Arabidopsis
  Journal of Experimental Botany. Aug, 2016  |   Pubmed ID: 27385766
• Arabidopsis Cryptochrome 1 Functions in Nitrogen Regulation of Flowering
  Proceedings of the National Academy of Sciences of the United States of America. 07, 2016  |   Pubmed ID: 27325772
• The SNW Domain of SKIP Is Required for Its Integration into the Spliceosome and Its Interaction with the Paf1 Complex in Arabidopsis
  Molecular Plant. Jul, 2016  |   Pubmed ID: 27130079
• SKIP Interacts with the Paf1 Complex to Regulate Flowering Via the Activation of FLC Transcription in Arabidopsis
  Molecular Plant. Dec, 2015  |   Pubmed ID: 26384244
• SKIP Confers Osmotic Tolerance During Salt Stress by Controlling Alternative Gene Splicing in Arabidopsis
  Molecular Plant. Jul, 2015  |   Pubmed ID: 25617718
• Two Novel NAC Transcription Factors Regulate Gene Expression and Flowering Time by Associating with the Histone Demethylase JMJ14
  Nucleic Acids Research. Feb, 2015  |   Pubmed ID: 25578968
• Ethylene Promotes Hypocotyl Growth and HY5 Degradation by Enhancing the Movement of COP1 to the Nucleus in the Light
  PLoS Genetics. 2013  |   Pubmed ID: 24348273
• USP49 Deubiquitinates Histone H2B and Regulates Cotranscriptional Pre-mRNA Splicing
  Genes & Development. Jul, 2013  |   Pubmed ID: 23824326
• The ATP-binding Cassette Transporter ABCB19 Regulates Postembryonic Organ Separation in Arabidopsis
  PloS One. 2013  |   Pubmed ID: 23560110
• Arabidopsis CSN5B Interacts with VTC1 and Modulates Ascorbic Acid Synthesis
  The Plant Cell. Feb, 2013  |   Pubmed ID: 23424245
• Unraveling the Circadian Clock in Arabidopsis
  Plant Signaling & Behavior. Feb, 2013  |   Pubmed ID: 23221775
• Basic Helix-loop-helix Transcription Factors and Epidermal Cell Fate Determination in Arabidopsis
  Plant Signaling & Behavior. Dec, 2012  |   Pubmed ID: 23073001
• SKIP is a Component of the Spliceosome Linking Alternative Splicing and the Circadian Clock in Arabidopsis
  The Plant Cell. Aug, 2012  |   Pubmed ID: 22942380
• IBM1, a JmjC Domain-containing Histone Demethylase, is Involved in the Regulation of RNA-directed DNA Methylation Through the Epigenetic Control of RDR2 and DCL3 Expression in Arabidopsis
  Nucleic Acids Research. Oct, 2012  |   Pubmed ID: 22772985
• Overexpression of a Histone H3K4 Demethylase, JMJ15, Accelerates Flowering Time in Arabidopsis
  Plant Cell Reports. Jul, 2012  |   Pubmed ID: 22555401
• A Companion Cell-dominant and Developmentally Regulated H3K4 Demethylase Controls Flowering Time in Arabidopsis Via the Repression of FLC Expression
  PLoS Genetics. 2012  |   Pubmed ID: 22536163
• A Single Amino Acid Substitution in IIIf Subfamily of Basic Helix-loop-helix Transcription Factor AtMYC1 Leads to Trichome and Root Hair Patterning Defects by Abolishing Its Interaction with Partner Proteins in Arabidopsis
  The Journal of Biological Chemistry. Apr, 2012  |   Pubmed ID: 22334670
• A Role for Protein Kinase Casein Kinase2 α-subunits in the Arabidopsis Circadian Clock
  Plant Physiology. Nov, 2011  |   Pubmed ID: 21900482
• Overexpression of AtBMI1C, a Polycomb Group Protein Gene, Accelerates Flowering in Arabidopsis
  PloS One. 2011  |   Pubmed ID: 21701597
• A Transcriptome Atlas of Rice Cell Types Uncovers Cellular, Functional and Developmental Hierarchies
  Nature Genetics. Feb, 2009  |   Pubmed ID: 19122662
• Characterization of the Genome Expression Trends in the Heading-stage Panicle of Six Rice Lineages
  Genomics. Feb, 2009  |   Pubmed ID: 18996467
• Histone H2B Monoubiquitination in the Chromatin of FLOWERING LOCUS C Regulates Flowering Time in Arabidopsis
  The Plant Cell. Oct, 2008  |   Pubmed ID: 18849490
• Functional Characterization of the Arabidopsis Ubiquitin-specific Protease Gene Family Reveals Specific Role and Redundancy of Individual Members in Development
  The Plant Journal : for Cell and Molecular Biology. Sep, 2008  |   Pubmed ID: 18485060
• The Preferential Retention of Starch Synthesis Genes Reveals the Impact of Whole-genome Duplication on Grass Evolution
  Molecular Biology and Evolution. Jun, 2008  |   Pubmed ID: 18296698
• Heterotrimeric G-protein Participation in Arabidopsis Pollen Germination Through Modulation of a Plasmamembrane Hyperpolarization-activated Ca2+-permeable Channel
  The New Phytologist. 2007  |   Pubmed ID: 17953540
• Disruption of Phytoene Desaturase Gene Results in Albino and Dwarf Phenotypes in Arabidopsis by Impairing Chlorophyll, Carotenoid, and Gibberellin Biosynthesis
  Cell Research. May, 2007  |   Pubmed ID: 17486124
• A G Protein-coupled Receptor is a Plasma Membrane Receptor for the Plant Hormone Abscisic Acid
  Science (New York, N.Y.). Mar, 2007  |   Pubmed ID: 17347412
• Global Genome Expression Analysis of Rice in Response to Drought and High-salinity Stresses in Shoot, Flag Leaf, and Panicle
  Plant Molecular Biology. Mar, 2007  |   Pubmed ID: 17225073
• A Simple and Reliable Assay for Detecting Specific Nucleotide Sequences in Plants Using Optical Thin-film Biosensor Chips
  The Plant Journal : for Cell and Molecular Biology. Jan, 2007  |   Pubmed ID: 17156412
• Conservation and Divergence of Light-regulated Genome Expression Patterns During Seedling Development in Rice and Arabidopsis
  The Plant Cell. Dec, 2005  |   Pubmed ID: 16284311
• Arabidopsis FHY1 Protein Stability is Regulated by Light Via Phytochrome A and 26S Proteasome
  Plant Physiology. Nov, 2005  |   Pubmed ID: 16244150
• A Microarray Analysis of the Rice Transcriptome and Its Comparison to Arabidopsis
  Genome Research. Sep, 2005  |   Pubmed ID: 16140994
• Apoplastic Calmodulin Receptor-like Binding Proteins in Suspension-cultured Cells of Arabidopsis Thaliana
  The Journal of Biological Chemistry. Sep, 2005  |   Pubmed ID: 16000297
• Organ-specific Expression of Arabidopsis Genome During Development
  Plant Physiology. May, 2005  |   Pubmed ID: 15888681
• A Tiling Microarray Expression Analysis of Rice Chromosome 4 Suggests a Chromosome-level Regulation of Transcription
  The Plant Cell. Jun, 2005  |   Pubmed ID: 15863518
• Arabidopsis Has Two Redundant Cullin3 Proteins That Are Essential for Embryo Development and That Interact with RBX1 and BTB Proteins to Form Multisubunit E3 Ubiquitin Ligase Complexes in Vivo
  The Plant Cell. Apr, 2005  |   Pubmed ID: 15772280
• Cullins 3a and 3b Assemble with Members of the Broad Complex/tramtrack/bric-a-brac (BTB) Protein Family to Form Essential Ubiquitin-protein Ligases (E3s) in Arabidopsis
  The Journal of Biological Chemistry. May, 2005  |   Pubmed ID: 15749712
• Evaluation of Light Regulatory Potential of Calvin Cycle Steps Based on Large-scale Gene Expression Profiling Data
  Plant Molecular Biology. Nov, 2003  |   Pubmed ID: 15010613
• A Genome-wide Analysis of Blue-light Regulation of Arabidopsis Transcription Factor Gene Expression During Seedling Development
  Plant Physiology. Dec, 2003  |   Pubmed ID: 14605227
• PathMAPA: a Tool for Displaying Gene Expression and Performing Statistical Tests on Metabolic Pathways at Multiple Levels for Arabidopsis
  BMC Bioinformatics. Nov, 2003  |   Pubmed ID: 14604444
• The COP1-SPA1 Interaction Defines a Critical Step in Phytochrome A-mediated Regulation of HY5 Activity
  Genes & Development. Nov, 2003  |   Pubmed ID: 14597662
• Phosphate Starvation Triggers Distinct Alterations of Genome Expression in Arabidopsis Roots and Leaves
  Plant Physiology. Jul, 2003  |   Pubmed ID: 12857808
• The COP9 Signalosome Interacts Physically with SCF COI1 and Modulates Jasmonate Responses
  The Plant Cell. May, 2003  |   Pubmed ID: 12724535
• Analysis of the Mutational Effects of the COP/DET/FUS Loci on Genome Expression Profiles Reveals Their Overlapping Yet Not Identical Roles in Regulating Arabidopsis Seedling Development
  Development (Cambridge, England). Mar, 2003  |   Pubmed ID: 12538522
• Analysis of Far-red Light-regulated Genome Expression Profiles of Phytochrome A Pathway Mutants in Arabidopsis
  The Plant Journal : for Cell and Molecular Biology. Dec, 2002  |   Pubmed ID: 12472688
• Genomic Evidence for COP1 As a Repressor of Light-regulated Gene Expression and Development in Arabidopsis
  The Plant Cell. Oct, 2002  |   Pubmed ID: 12368493