Michael Kuhn

Publications

• On the Potentials of Multiple Climate Variables in Assessing the Spatio-temporal Characteristics of Hydrological Droughts over the Volta Basin
  The Science of the Total Environment. Jul, 2016  |   Pubmed ID: 27064845
• Growth and Welfare Effects of Health Care in Knowledge-based Economies
  Journal of Health Economics. Mar, 2016  |   Pubmed ID: 26918295
• STITCH 5: Augmenting Protein-chemical Interaction Networks with Tissue and Affinity Data
  Nucleic Acids Research. Jan, 2016  |   Pubmed ID: 26590256
• EggNOG 4.5: a Hierarchical Orthology Framework with Improved Functional Annotations for Eukaryotic, Prokaryotic and Viral Sequences
  Nucleic Acids Research. Jan, 2016  |   Pubmed ID: 26582926
• The SIDER Database of Drugs and Side Effects
  Nucleic Acids Research. Jan, 2016  |   Pubmed ID: 26481350
• Arthroscopic Findings After Traumatic Shoulder Instability in Patients Older Than 35 Years
  Orthopaedic Journal of Sports Medicine. May, 2015  |   Pubmed ID: 26675676
• One-Electron Energies from the Two-Component GW Method
  Journal of Chemical Theory and Computation. Mar, 2015  |   Pubmed ID: 26579751
• Luminescence in Phosphine-stabilized Copper Chalcogenide Cluster Molecules--a Comparative Study
  Inorganic Chemistry. Oct, 2015  |   Pubmed ID: 26378617
• Designed to Kill: Novel Menin-MLL Inhibitors Target MLL-rearranged Leukemia
  Cancer Cell. Apr, 2015  |   Pubmed ID: 25873167
• Two-component Hybrid Time-dependent Density Functional Theory Within the Tamm-Dancoff Approximation
  The Journal of Chemical Physics. Jan, 2015  |   Pubmed ID: 25612698
• MLL Partial Tandem Duplication Leukemia Cells Are Sensitive to Small Molecule DOT1L Inhibition
  Haematologica. May, 2015  |   Pubmed ID: 25596271
• STRING V10: Protein-protein Interaction Networks, Integrated over the Tree of Life
  Nucleic Acids Research. Jan, 2015  |   Pubmed ID: 25352553
• Correlation Energies from the Two-Component Random Phase Approximation
  Journal of Chemical Theory and Computation. Feb, 2014  |   Pubmed ID: 26580039
• Superatomic Orbitals Under Spin-Orbit Coupling
  The Journal of Physical Chemistry Letters. Oct, 2014  |   Pubmed ID: 26278432
• Phosphorescence Lifetimes of Organic Light-emitting Diodes from Two-component Time-dependent Density Functional Theory
  The Journal of Chemical Physics. Dec, 2014  |   Pubmed ID: 25494744
• LpxC Inhibitors As New Antibacterial Agents and Tools for Studying Regulation of Lipid A Biosynthesis in Gram-negative Pathogens
  MBio. 2014  |   Pubmed ID: 25271285
• Red-luminescent Biphosphine Stabilized 'Cu₁₂S₆' Cluster Molecules
  Chemical Communications (Cambridge, England). Sep, 2014  |   Pubmed ID: 25098944
• Coiled-coil Proteins Facilitated the Functional Expansion of the Centrosome
  PLoS Computational Biology. Jun, 2014  |   Pubmed ID: 24901223
• Genome-wide Genotyping of Acute Myeloid Leukemia with Translocation T(9;11)(p22;q23) Reveals Novel Recurrent Genomic Alterations
  Haematologica. Aug, 2014  |   Pubmed ID: 24859875
• Efficient Semi-analytical Propagation Techniques for Electromagnetic Fields
  Journal of the Optical Society of America. A, Optics, Image Science, and Vision. Mar, 2014  |   Pubmed ID: 24690657
• Development of a Kinetic Assay for Late Endosome Movement
  Journal of Biomolecular Screening. Aug, 2014  |   Pubmed ID: 24556389
• EggNOG V4.0: Nested Orthology Inference Across 3686 Organisms
  Nucleic Acids Research. Jan, 2014  |   Pubmed ID: 24297252
• STITCH 4: Integration of Protein-chemical Interactions with User Data
  Nucleic Acids Research. Jan, 2014  |   Pubmed ID: 24293645
• Prospective Randomized Double-blind Multicentre Phase II Study Comparing Gemcitabine and Cisplatin Plus Sorafenib Chemotherapy with Gemcitabine and Cisplatin Plus Placebo in Locally Advanced And/or Metastasized Urothelial Cancer: SUSE (AUO-AB 31/05)
  BJU International. Mar, 2014  |   Pubmed ID: 24053564
• Implementation of Two-Component Time-Dependent Density Functional Theory in TURBOMOLE
  Journal of Chemical Theory and Computation. Dec, 2013  |   Pubmed ID: 26592271
• Modeling of Transient Flow Through a Viscoelastic Preparative Chromatography Packing
  Biotechnology Progress. Jul-Aug, 2013  |   Pubmed ID: 23798499
• Discovery of Dap-3 Polymyxin Analogues for the Treatment of Multidrug-resistant Gram-negative Nosocomial Infections
  Journal of Medicinal Chemistry. Jun, 2013  |   Pubmed ID: 23735048
• Clonal Evolution in Relapsed NPM1-mutated Acute Myeloid Leukemia
  Blood. Jul, 2013  |   Pubmed ID: 23704090
• Systematic Identification of Proteins That Elicit Drug Side Effects
  Molecular Systems Biology. 2013  |   Pubmed ID: 23632385
• Characterization of Drug-induced Transcriptional Modules: Towards Drug Repositioning and Functional Understanding
  Molecular Systems Biology. 2013  |   Pubmed ID: 23632384
• Electron Tunneling from Electronically Excited States of Isolated Bisdisulizole-derived Trianion Chromophores Following UV Absorption
  Physical Chemistry Chemical Physics : PCCP. May, 2013  |   Pubmed ID: 23549163
• Early Airway Pressure Release Ventilation Prevents ARDS-a Novel Preventive Approach to Lung Injury
  Shock (Augusta, Ga.). Jan, 2013  |   Pubmed ID: 23247119
• STRING V9.1: Protein-protein Interaction Networks, with Increased Coverage and Integration
  Nucleic Acids Research. Jan, 2013  |   Pubmed ID: 23203871
• Synthesis, Structure, and Characterization of Dinuclear Copper(I) Halide Complexes with P^N Ligands Featuring Exciting Photoluminescence Properties
  Inorganic Chemistry. Mar, 2013  |   Pubmed ID: 23061380
• Deregulated Expression of EVI1 Defines a Poor Prognostic Subset of MLL-rearranged Acute Myeloid Leukemias: a Study of the German-Austrian Acute Myeloid Leukemia Study Group and the Dutch-Belgian-Swiss HOVON/SAKK Cooperative Group
  Journal of Clinical Oncology : Official Journal of the American Society of Clinical Oncology. Jan, 2013  |   Pubmed ID: 23008312
• Parabasal Field Decomposition and Its Application to Non-paraxial Propagation
  Optics Express. Oct, 2012  |   Pubmed ID: 23188313
• High-resolution Genomic Profiling of Chronic Lymphocytic Leukemia Reveals New Recurrent Genomic Alterations
  Blood. Dec, 2012  |   Pubmed ID: 23047824
• Lack of Relationship Between Microvascular and Macrovascular Disease in Heart Transplant Recipients
  Transplantation. Nov, 2012  |   Pubmed ID: 23044666
• Commonly Altered Genomic Regions in Acute Myeloid Leukemia Are Enriched for Somatic Mutations Involved in Chromatin Remodeling and Splicing
  Blood. Nov, 2012  |   Pubmed ID: 22976956
• Early Stabilizing Alveolar Ventilation Prevents Acute Respiratory Distress Syndrome: a Novel Timing-based Ventilatory Intervention to Avert Lung Injury
  The Journal of Trauma and Acute Care Surgery. Aug, 2012  |   Pubmed ID: 22846945
• High-resolution Genomic Profiling of Adult and Pediatric Core-binding Factor Acute Myeloid Leukemia Reveals New Recurrent Genomic Alterations
  Blood. Mar, 2012  |   Pubmed ID: 22234698
• EggNOG V3.0: Orthologous Groups Covering 1133 Organisms at 41 Different Taxonomic Ranges
  Nucleic Acids Research. Jan, 2012  |   Pubmed ID: 22096231
• STITCH 3: Zooming in on Protein-chemical Interactions
  Nucleic Acids Research. Jan, 2012  |   Pubmed ID: 22075997
• Evaluation of Pharmacokinetic/pharmacodynamic Relationships of PD-0162819, a Biotin Carboxylase Inhibitor Representing a New Class of Antibacterial Compounds, Using in Vitro Infection Models
  Antimicrobial Agents and Chemotherapy. Jan, 2012  |   Pubmed ID: 21986824
• Assessing Excited State Methods by Adiabatic Excitation Energies
  Journal of Chemical Theory and Computation. Aug, 2011  |   Pubmed ID: 26606613
• MPI Cell Tracking: What Can We Learn from MRI?
  Proceedings of SPIE--the International Society for Optical Engineering. 2011  |   Pubmed ID: 22389573
• Prediction of Drug Combinations by Integrating Molecular and Pharmacological Data
  PLoS Computational Biology. Dec, 2011  |   Pubmed ID: 22219721
• Phosphorescence Energies of Organic Light-emitting Diodes from Spin-flip Tamm-Dancoff Approximation Time-dependent Density Functional Theory
  Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. Dec, 2011  |   Pubmed ID: 21853514
• Optimal Public Provision of Nursing Homes and the Role of Information
  Journal of Health Economics. Jul, 2011  |   Pubmed ID: 21652101
• The Lung Image Database Consortium (LIDC) and Image Database Resource Initiative (IDRI): a Completed Reference Database of Lung Nodules on CT Scans
  Medical Physics. Feb, 2011  |   Pubmed ID: 21452728
• The STRING Database in 2011: Functional Interaction Networks of Proteins, Globally Integrated and Scored
  Nucleic Acids Research. Jan, 2011  |   Pubmed ID: 21045058
• A Systematic Screen for Protein-lipid Interactions in Saccharomyces Cerevisiae
  Molecular Systems Biology. Nov, 2010  |   Pubmed ID: 21119626
• Drug-induced Regulation of Target Expression
  PLoS Computational Biology. 2010  |   Pubmed ID: 20838579
• The DBCLS BioHackathon: Standardization and Interoperability for Bioinformatics Web Services and Workflows. The DBCLS BioHackathon Consortium*
  Journal of Biomedical Semantics. 2010  |   Pubmed ID: 20727200
• Live Coverage of Scientific Conferences Using Web Technologies
  PLoS Computational Biology. Jan, 2010  |   Pubmed ID: 20126525
• Live Coverage of Intelligent Systems for Molecular Biology/European Conference on Computational Biology (ISMB/ECCB) 2009
  PLoS Computational Biology. Jan, 2010  |   Pubmed ID: 20126524
• The Reproductive Value in Distributed Optimal Control Models
  Theoretical Population Biology. May, 2010  |   Pubmed ID: 20096297
• A Side Effect Resource to Capture Phenotypic Effects of Drugs
  Molecular Systems Biology. 2010  |   Pubmed ID: 20087340
• STITCH 2: an Interaction Network Database for Small Molecules and Proteins
  Nucleic Acids Research. Jan, 2010  |   Pubmed ID: 19897548
• Single Postoperative Instillation of Gemcitabine in Patients with Non-muscle-invasive Transitional Cell Carcinoma of the Bladder: a Randomised, Double-blind, Placebo-controlled Phase III Multicentre Study
  European Urology. Sep, 2009  |   Pubmed ID: 19560257
• Reflect: Augmented Browsing for the Life Scientist
  Nature Biotechnology. Jun, 2009  |   Pubmed ID: 19513049
• Microblogging the ISMB: a New Approach to Conference Reporting
  PLoS Computational Biology. Jan, 2009  |   Pubmed ID: 19180175
• A Class of Selective Antibacterials Derived from a Protein Kinase Inhibitor Pharmacophore
  Proceedings of the National Academy of Sciences of the United States of America. Feb, 2009  |   Pubmed ID: 19164768
• STRING 8--a Global View on Proteins and Their Functional Interactions in 630 Organisms
  Nucleic Acids Research. Jan, 2009  |   Pubmed ID: 18940858
• Pace Yourself
  Arthroscopy : the Journal of Arthroscopic & Related Surgery : Official Publication of the Arthroscopy Association of North America and the International Arthroscopy Association. Nov, 2008  |   Pubmed ID: 18971062
• Drug Target Identification Using Side-effect Similarity
  Science (New York, N.Y.). Jul, 2008  |   Pubmed ID: 18621671
• Comparison of 1.0 M Gadobutrol and 0.5 M Gadopentate Dimeglumine-enhanced MRI in 471 Patients with Known or Suspected Renal Lesions: Results of a Multicenter, Single-blind, Interindividual, Randomized Clinical Phase III Trial
  European Radiology. Nov, 2008  |   Pubmed ID: 18607594
• Response Regulator DegU of Listeria Monocytogenes Controls Temperature-responsive Flagellar Gene Expression in Its Unphosphorylated State
  Journal of Bacteriology. Jul, 2008  |   Pubmed ID: 18441066
• Acute Elbow Dislocations
  The Orthopedic Clinics of North America. Apr, 2008  |   Pubmed ID: 18374806
• Large-scale Prediction of Drug-target Relationships
  FEBS Letters. Apr, 2008  |   Pubmed ID: 18291108
• STITCH: Interaction Networks of Chemicals and Proteins
  Nucleic Acids Research. Jan, 2008  |   Pubmed ID: 18084021
• SuperTarget and Matador: Resources for Exploring Drug-target Relationships
  Nucleic Acids Research. Jan, 2008  |   Pubmed ID: 17942422
• EggNOG: Automated Construction and Annotation of Orthologous Groups of Genes
  Nucleic Acids Research. Jan, 2008  |   Pubmed ID: 17942413
• Allografts in the Treatment of Anterior Cruciate Ligament Injuries
  Sports Medicine and Arthroscopy Review. Sep, 2007  |   Pubmed ID: 17700373
• Research Highlights from the PathoGenoMik Network 2001 - 2006
  International Journal of Medical Microbiology : IJMM. Nov, 2007  |   Pubmed ID: 17543580
• Characterization of RelA and CodY Mutants of Listeria Monocytogenes: Identification of the CodY Regulon and Its Role in Virulence
  Molecular Microbiology. Mar, 2007  |   Pubmed ID: 17302820
• STRING 7--recent Developments in the Integration and Prediction of Protein Interactions
  Nucleic Acids Research. Jan, 2007  |   Pubmed ID: 17098935
• Evaluation of Three-dimensional Image Registration Methodologies for in Vivo Micro-computed Tomography
  Annals of Biomedical Engineering. Oct, 2006  |   Pubmed ID: 16957987
• A Biologic Definition of Burkitt's Lymphoma from Transcriptional and Genomic Profiling
  The New England Journal of Medicine. Jun, 2006  |   Pubmed ID: 16760442
• Revision Lateral Ankle Reconstruction
  Foot & Ankle International. Feb, 2006  |   Pubmed ID: 16487457
• Direct to Consumer Advertising in Pharmaceutical Markets
  Journal of Health Economics. Jan, 2006  |   Pubmed ID: 16280182
• Response Regulator DegU of Listeria Monocytogenes Regulates the Expression of Flagella-specific Genes
  FEMS Microbiology Letters. Nov, 2005  |   Pubmed ID: 16213668
• Decentralization Strategies and Provider Incentives in Healthcare: Evidence from the English National Health Service
  Applied Health Economics and Health Policy. 2005  |   Pubmed ID: 16076238
• Blood Flow to the Metatarsal Head After Chevron Bunionectomy
  Foot & Ankle International. Jul, 2005  |   Pubmed ID: 16045842
• Construction and Characterization of Listeria Monocytogenes Mutants with In-frame Deletions in the Response Regulator Genes Identified in the Genome Sequence
  Infection and Immunity. May, 2005  |   Pubmed ID: 15845524
• Strand-loop-strand Motifs: Prediction of Hairpins and Diverging Turns in Proteins
  Proteins. Feb, 2004  |   Pubmed ID: 14696190
• Fate of Polytetrafluoroethylene Monocusp Pulmonary Valves in an Animal Model
  Asian Cardiovascular & Thoracic Annals. Dec, 2003  |   Pubmed ID: 14681084
• Deletion of the Gene Encoding P60 in Listeria Monocytogenes Leads to Abnormal Cell Division and Loss of Actin-based Motility
  Infection and Immunity. Jun, 2003  |   Pubmed ID: 12761132
• The NorM Efflux Pump of Neisseria Gonorrhoeae and Neisseria Meningitidis Recognizes Antimicrobial Cationic Compounds
  Journal of Bacteriology. Feb, 2003  |   Pubmed ID: 12533487
• Antibodies Present in Normal Human Serum Inhibit Invasion of Human Brain Microvascular Endothelial Cells by Listeria Monocytogenes
  Infection and Immunity. Jan, 2003  |   Pubmed ID: 12496153
• Polyorchidism: a Strange Anomaly with Unsuspected Properties
  The Journal of Urology. Jul, 2002  |   Pubmed ID: 12050529
• InlA- but Not InlB-mediated Internalization of Listeria Monocytogenes by Non-phagocytic Mammalian Cells Needs the Support of Other Internalins
  Molecular Microbiology. Feb, 2002  |   Pubmed ID: 11929515