Mitchel J. Doktycz Biosciences Division Oak Ridge National Laboratory Biography Publications Institution JoVE Articles Mitchel J. Doktycz has not added a biography. If you are Mitchel J. Doktycz and would like to personalize this page please email our Author Liaison for assistance. Publications Advances and Perspectives in Discovery and Functional Analysis of Small Secreted Proteins in Plants Horticulture Research. Jun, 2021 | Pubmed ID: 34059650 Formation, Characterization and Modeling of Emergent Synthetic Microbial Communities Computational and Structural Biotechnology Journal. 2021 | Pubmed ID: 33995895 A Lysate Proteome Engineering Strategy for Enhancing Cell-free Metabolite Production Metabolic Engineering Communications. Jun, 2021 | Pubmed ID: 33552897 Machine Learning-based Prediction of Enzyme Substrate Scope: Application to Bacterial Nitrilases Proteins. 03, 2021 | Pubmed ID: 33118210 Targeted Growth Medium Dropouts Promote Aromatic Compound Synthesis in Crude Cell-Free Systems ACS Synthetic Biology. 11, 2020 | Pubmed ID: 33044063 A Carotenoid-deficient Mutant of the Plant-associated Microbe Pantoea Sp. YR343 Displays an Altered Membrane Proteome Scientific Reports. 09, 2020 | Pubmed ID: 32917935 Computationally Guided Discovery and Experimental Validation of Indole-3-acetic Acid Synthesis Pathways ACS Chemical Biology. 12, 2019 | Pubmed ID: 31693336 Microfluidics and Metabolomics Reveal Symbiotic Bacterial-Fungal Interactions Between and Include Metabolite Exchange Frontiers in Microbiology. 2019 | Pubmed ID: 31632357 Label-free Time- and Space-resolved Exometabolite Sampling of Growing Plant Roots Through Nanoporous Interfaces Scientific Reports. 07, 2019 | Pubmed ID: 31312009 Pore-scale Hydrodynamics Influence the Spatial Evolution of Bacterial Biofilms in a Microfluidic Porous Network PloS One. 2019 | Pubmed ID: 31246972 Increasing Access to Microfluidics for Studying Fungi and Other Branched Biological Structures Fungal Biology and Biotechnology. 2019 | Pubmed ID: 31198578 Loss of Carotenoids from Membranes of Pantoea Sp. YR343 Results in Altered Lipid Composition and Changes in Membrane Biophysical Properties Biochimica Et Biophysica Acta. Biomembranes. 07, 2019 | Pubmed ID: 31095944 Itaconic Acid Degradation in : the Role of Unexpected Bioconversion Pathways Fungal Biology and Biotechnology. 2019 | Pubmed ID: 30622724 Elucidating the Potential of Crude Cell Extracts for Producing Pyruvate from Glucose Synthetic Biology (Oxford, England). 2018 | Pubmed ID: 32995514 Exploration of the Biosynthetic Potential of the Microbiome MSystems. Sep-Oct, 2018 | Pubmed ID: 30320216 Elucidating Duramycin's Bacterial Selectivity and Mode of Action on the Bacterial Cell Envelope Frontiers in Microbiology. 2018 | Pubmed ID: 29491859 Nano-Enabled Approaches to Chemical Imaging in Biosystems Annual Review of Analytical Chemistry (Palo Alto, Calif.). 06, 2018 | Pubmed ID: 29490189 Abiotic Stresses Shift Belowground -Associated Bacteria Toward a Core Stress Microbiome MSystems. Jan-Feb, 2018 | Pubmed ID: 29404422 Automated Interpretation and Extraction of Topographic Information from Time of Flight Secondary Ion Mass Spectrometry Data Scientific Reports. 12, 2017 | Pubmed ID: 29213083 β-(1,3)-Glucan Unmasking in Some Candida Albicans Mutants Correlates with Increases in Cell Wall Surface Roughness and Decreases in Cell Wall Elasticity Infection and Immunity. Jan, 2017 | Pubmed ID: 27849179 Enrichment of Root Endophytic Bacteria from Populus Deltoides and Single-Cell-Genomics Analysis Applied and Environmental Microbiology. Sep, 2016 | Pubmed ID: 27422831 While-you-wait Proteins? Producing Biomolecules at the Point of Need Expert Review of Proteomics. Aug, 2016 | Pubmed ID: 27402489 Two Poplar-Associated Bacterial Isolates Induce Additive Favorable Responses in a Constructed Plant-Microbiome System Frontiers in Plant Science. 2016 | Pubmed ID: 27200001 Stochastic Assembly of Bacteria in Microwell Arrays Reveals the Importance of Confinement in Community Development PloS One. 2016 | Pubmed ID: 27152511 A Carotenoid-Deficient Mutant in Pantoea Sp. YR343, a Bacteria Isolated from the Rhizosphere of Populus Deltoides, Is Defective in Root Colonization Frontiers in Microbiology. 2016 | Pubmed ID: 27148182 Toward Microfluidic Reactors for Cell-Free Protein Synthesis at the Point-of-Care Small (Weinheim an Der Bergstrasse, Germany). Feb, 2016 | Pubmed ID: 26690885 Microstencils to Generate Defined, Multi-species Patterns of Bacteria Biomicrofluidics. Nov, 2015 | Pubmed ID: 26594264 Fabrication of Nanoporous Membranes for Tuning Microbial Interactions and Biochemical Reactions Journal of Vacuum Science and Technology. B, Nanotechnology & Microelectronics : Materials, Processing, Measurement, & Phenomena : JVST B. Nov, 2015 | Pubmed ID: 26543684 Metabolic Functions of Pseudomonas Fluorescens Strains from Populus Deltoides Depend on Rhizosphere or Endosphere Isolation Compartment Frontiers in Microbiology. 2015 | Pubmed ID: 26528266 New Surface Radiolabeling Schemes of Super Paramagnetic Iron Oxide Nanoparticles (SPIONs) for Biodistribution Studies Nanoscale. Apr, 2015 | Pubmed ID: 25790032 Microstructured Block Copolymer Surfaces for Control of Microbe Adhesion and Aggregation Biosensors. Mar, 2014 | Pubmed ID: 25587410 Evaluation and Validation of De Novo and Hybrid Assembly Techniques to Derive High-quality Genome Sequences Bioinformatics (Oxford, England). Oct, 2014 | Pubmed ID: 24930142 Multi-input Regulation and Logic with T7 Promoters in Cells and Cell-free Systems PloS One. 2013 | Pubmed ID: 24194933 Enteroaggregative Escherichia Coli: Surface Protein Dispersin Increases Bacterial Uptake of Ciprofloxacin International Journal of Antimicrobial Agents. Nov, 2013 | Pubmed ID: 24011504 Layer-by-layer Templated Assembly of Silica at the Nanoscale Langmuir : the ACS Journal of Surfaces and Colloids. Feb, 2013 | Pubmed ID: 23360298 Relating Nanomaterial Properties and Microbial Toxicity Nanoscale. Jan, 2013 | Pubmed ID: 23203029 Monodisperse Alginate Microgel Formation in a Three-dimensional Microfluidic Droplet Generator Biomicrofluidics. 2012 | Pubmed ID: 24198865 Twenty-one Genome Sequences from Pseudomonas Species and 19 Genome Sequences from Diverse Bacteria Isolated from the Rhizosphere and Endosphere of Populus Deltoides Journal of Bacteriology. Nov, 2012 | Pubmed ID: 23045501 Draft Genome Sequence of Rhizobium Sp. Strain PDO1-076, a Bacterium Isolated from Populus Deltoides Journal of Bacteriology. May, 2012 | Pubmed ID: 22493196 Pseudomonas Fluorescens Induces Strain-dependent and Strain-independent Host Plant Responses in Defense Networks, Primary Metabolism, Photosynthesis, and Fitness Molecular Plant-microbe Interactions : MPMI. Jun, 2012 | Pubmed ID: 22375709 エンジニアシルバーナノ結晶により誘導される細胞毒性は、表面コーティングおよび細胞タイプに依存しています Langmuir : the ACS Journal of Surfaces and Colloids. Feb, 2012 | Pubmed ID: 22216981 ナノポーラス、ピコリットルのボリュームのコンテナ内の酵素反応 Analytical Chemistry. Jan, 2012 | Pubmed ID: 22148720 無細胞系における発現の最適化と合成遺伝子ネットワーク Nucleic Acids Research. Dec, 2011 | Pubmed ID: 22180537 走のようなChe1経路はAzospirillum Brasilenseの接着セルのプロパティに間接的役割を担っている FEMS Microbiology Letters. Oct, 2011 | Pubmed ID: 22092709 単分散生体適合性の硫化銀ナノ粒子：γ-プロテオバクテリア、細菌Shewanella Oneidensisを使用した簡便な外生 Acta Biomaterialia. Dec, 2011 | Pubmed ID: 21798382 ポプラのEndosphereと根の中で異なる微生物群集は、対照的な土壌タイプ間でルーツをDeltoides Applied and Environmental Microbiology. Sep, 2011 | Pubmed ID: 21764952 Nanofabricated細胞模倣する確率共鳴によって駆動される生物のコミュニケーションのモデル Nano Communication Networks. Mar, 2011 | Pubmed ID: 21731597 腸管凝集性大腸菌と表面タンパク質Dispersinの役割に関するシプロフロキサシンのサブ最小発育阻止濃度の影響 International Journal of Antimicrobial Agents. Jul, 2011 | Pubmed ID: 21570813 金属還元細菌ShewanellaはのOneidensisを用いた離散球状金ナノ粒子のBiofabrication Acta Biomaterialia. May, 2011 | Pubmed ID: 21241833 原子間力顕微鏡による細胞表面とAzospirillum Brasilenseの細胞外マトリックスの再構成1シグナル伝達経路の変異体走のようなキャラクタリゼーション FEMS Microbiology Letters. Jan, 2011 | Pubmed ID: 21105907 Nanostructured Silicon Membranes for Control of Molecular Transport Journal of Vacuum Science and Technology. B, Nanotechnology & Microelectronics : Materials, Processing, Measurement, & Phenomena : JVST B. Nov, 2010 | Pubmed ID: 24932436 細菌の増殖と生存にエンジニアセリウム酸化物ナノ粒子の効果 Applied and Environmental Microbiology. Dec, 2010 | Pubmed ID: 20952651 生体試料の原子間力顕微鏡 Wiley Interdisciplinary Reviews. Nanomedicine and Nanobiotechnology. Nov-Dec, 2010 | Pubmed ID: 20672388 表面電荷とNanotailored投稿の混雑した環境中のタンパク質の空間依存性輸送 ACS Nano. Jun, 2010 | Pubmed ID: 20515056 銀ナノ結晶：細菌ShewanellaのOneidensisを使用してBiofabrication、およびグラム陰性およびグラム陽性菌上における比較毒性の評価 Environmental Science & Technology. Jul, 2010 | Pubmed ID: 20509652 マイクロ流体チップ内のナノポーラスシリコンベースのバイオリアクターの開発と作製 Lab on a Chip. May, 2010 | Pubmed ID: 20390137 エンジニアピコリットルのボリュームのコンテナのセルフリー翻訳 Annual ORNL Biomedical Science and Engineering Center Conference ORNL Biomedical Science and Engineering Center Conference. Jun, 2009 | Pubmed ID: 21278819 結合親和性の広い範囲のタンパク質相互作用を検出するためのin Vivoイメージングベースのアッセイで Analytical Biochemistry. Dec, 2009 | Pubmed ID: 19698693 ポリピロールの電解における超微小電極の寸法の影響 Journal of Applied Physics. Jun, 2009 | Pubmed ID: 19657404 高密度カーボンナノファイバーアレイの合成のための触媒ナノ粒子の位置制御 Carbon. 2008 | Pubmed ID: 19448842 ポリピロール被覆された垂直配向カーボンナノファイバーに基づいて作動可能な膜 ACS Nano. Feb, 2008 | Pubmed ID: 19206624 グラム陰性菌におけるタンパク質 - タンパク質相互作用を研究するための一般的なシステム Journal of Proteome Research. Aug, 2008 | Pubmed ID: 18590317 ピロールの電解によるカーボンナノファイバー構造の寸法を制御する Synthetic Metals. Apr, 2007 | Pubmed ID: 18431459 ナノ対応の合成生物学 Molecular Systems Biology. 2007 | Pubmed ID: 17625513 近裸ヘアレス（HR（N））は突然変異毛の形成を中断しますが、ヘアレスコーディング領域に突然変異によるものではありません The Journal of Investigative Dermatology. Jul, 2007 | Pubmed ID: 17330134 表面堆積し、アフィニティー捕捉されたタンパク質の分析のための表面サンプリングプローブのエレクトロスプレー質量分析システムの評価 Rapid Communications in Mass Spectrometry : RCM. 2006 | Pubmed ID: 16521171 ハイスループットRNAの生産とマイクロアレイベースの解析のための組織の最適化Beadmilling Analytical Biochemistry. Sep, 2004 | Pubmed ID: 15301954 AFM Imaging of Bacteria in Liquid Media Immobilized on Gelatin Coated Mica Surfaces Ultramicroscopy. Oct-Nov, 2003 | Pubmed ID: 12801673 オリゴデオキシリボヌクレオチドマイクロアレイおよび仮想ハイブリダイゼーションを用いた原核生物の16S RRNA遺伝子のフィンガープリント Nucleic Acids Research. Jan, 2003 | Pubmed ID: 12527788 タンパク質複合体の同定とキャラクタリゼーションのための研究プログラム：ライフ "分子細胞システムセンター"へのゲノム Omics : a Journal of Integrative Biology. 2002 | Pubmed ID: 12630408 Comparative Analyses of the Secondary Structures of Synthetic and Intracellular Yeast MFA2 MRNAs Proceedings of the National Academy of Sciences of the United States of America. Dec, 1998 | Pubmed ID: 9843938 リセートベースの無細胞システムにおける代謝物プロファイリングのためのリキッドクロマトグラフィー結合と屈折率または質量分析法検出 Jaime Lorenzo N. Dinglasan1,3, David T. Reeves2,3, Robert L. Hettich3, Mitchel J. Doktycz3 1Graduate School of Genome Science & Technology, University of Tennessee Knoxville, 2Bredesen Center for Interdisciplinary Research, University of Tennessee Knoxville, 3Biosciences Division, Oak Ridge National Laboratory JoVE 62852 Bioengineering 二層流体プラットフォームシロイヌナズナ実生の根毛の形態のイメージング Jayde A. Aufrecht1,2, Jennifer M. Ryan3, Sahar Hasim4, David P. Allison2,3, Andreas Nebenführ3, Mitchel J. Doktycz1,2, Scott T. Retterer1,2 1Bredesen Center for Interdisciplinary Research and Graduate Education, University of Tennessee, 2Bioscience Division and Center for Nanophase Materials Sciences, Oak Ridge national Laboratory, 3Department of Biochemistry and Cellular and Molecular Biology, University of Tennessee, 4Department of Microbiology, University of Tennessee JoVE 55971 Bioengineering
リセートベースの無細胞システムにおける代謝物プロファイリングのためのリキッドクロマトグラフィー結合と屈折率または質量分析法検出 Jaime Lorenzo N. Dinglasan1,3, David T. Reeves2,3, Robert L. Hettich3, Mitchel J. Doktycz3 1Graduate School of Genome Science & Technology, University of Tennessee Knoxville, 2Bredesen Center for Interdisciplinary Research, University of Tennessee Knoxville, 3Biosciences Division, Oak Ridge National Laboratory JoVE 62852 Bioengineering
二層流体プラットフォームシロイヌナズナ実生の根毛の形態のイメージング Jayde A. Aufrecht1,2, Jennifer M. Ryan3, Sahar Hasim4, David P. Allison2,3, Andreas Nebenführ3, Mitchel J. Doktycz1,2, Scott T. Retterer1,2 1Bredesen Center for Interdisciplinary Research and Graduate Education, University of Tennessee, 2Bioscience Division and Center for Nanophase Materials Sciences, Oak Ridge national Laboratory, 3Department of Biochemistry and Cellular and Molecular Biology, University of Tennessee, 4Department of Microbiology, University of Tennessee JoVE 55971 Bioengineering
