Mitchel J. Doktycz Biosciences Division Oak Ridge National Laboratory Biography Publications Institution JoVE Articles Mitchel J. Doktycz has not added a biography. If you are Mitchel J. Doktycz and would like to personalize this page please email our Author Liaison for assistance. Publications Advances and Perspectives in Discovery and Functional Analysis of Small Secreted Proteins in Plants Horticulture Research. Jun, 2021 | Pubmed ID: 34059650 Formation, Characterization and Modeling of Emergent Synthetic Microbial Communities Computational and Structural Biotechnology Journal. 2021 | Pubmed ID: 33995895 A Lysate Proteome Engineering Strategy for Enhancing Cell-free Metabolite Production Metabolic Engineering Communications. Jun, 2021 | Pubmed ID: 33552897 Machine Learning-based Prediction of Enzyme Substrate Scope: Application to Bacterial Nitrilases Proteins. 03, 2021 | Pubmed ID: 33118210 Targeted Growth Medium Dropouts Promote Aromatic Compound Synthesis in Crude Cell-Free Systems ACS Synthetic Biology. 11, 2020 | Pubmed ID: 33044063 A Carotenoid-deficient Mutant of the Plant-associated Microbe Pantoea Sp. YR343 Displays an Altered Membrane Proteome Scientific Reports. 09, 2020 | Pubmed ID: 32917935 Computationally Guided Discovery and Experimental Validation of Indole-3-acetic Acid Synthesis Pathways ACS Chemical Biology. 12, 2019 | Pubmed ID: 31693336 Microfluidics and Metabolomics Reveal Symbiotic Bacterial-Fungal Interactions Between and Include Metabolite Exchange Frontiers in Microbiology. 2019 | Pubmed ID: 31632357 Label-free Time- and Space-resolved Exometabolite Sampling of Growing Plant Roots Through Nanoporous Interfaces Scientific Reports. 07, 2019 | Pubmed ID: 31312009 Pore-scale Hydrodynamics Influence the Spatial Evolution of Bacterial Biofilms in a Microfluidic Porous Network PloS One. 2019 | Pubmed ID: 31246972 Increasing Access to Microfluidics for Studying Fungi and Other Branched Biological Structures Fungal Biology and Biotechnology. 2019 | Pubmed ID: 31198578 Loss of Carotenoids from Membranes of Pantoea Sp. YR343 Results in Altered Lipid Composition and Changes in Membrane Biophysical Properties Biochimica Et Biophysica Acta. Biomembranes. 07, 2019 | Pubmed ID: 31095944 Itaconic Acid Degradation in : the Role of Unexpected Bioconversion Pathways Fungal Biology and Biotechnology. 2019 | Pubmed ID: 30622724 Elucidating the Potential of Crude Cell Extracts for Producing Pyruvate from Glucose Synthetic Biology (Oxford, England). 2018 | Pubmed ID: 32995514 Exploration of the Biosynthetic Potential of the Microbiome MSystems. Sep-Oct, 2018 | Pubmed ID: 30320216 Elucidating Duramycin's Bacterial Selectivity and Mode of Action on the Bacterial Cell Envelope Frontiers in Microbiology. 2018 | Pubmed ID: 29491859 Nano-Enabled Approaches to Chemical Imaging in Biosystems Annual Review of Analytical Chemistry (Palo Alto, Calif.). 06, 2018 | Pubmed ID: 29490189 Abiotic Stresses Shift Belowground -Associated Bacteria Toward a Core Stress Microbiome MSystems. Jan-Feb, 2018 | Pubmed ID: 29404422 Automated Interpretation and Extraction of Topographic Information from Time of Flight Secondary Ion Mass Spectrometry Data Scientific Reports. 12, 2017 | Pubmed ID: 29213083 β-(1,3)-Glucan Unmasking in Some Candida Albicans Mutants Correlates with Increases in Cell Wall Surface Roughness and Decreases in Cell Wall Elasticity Infection and Immunity. Jan, 2017 | Pubmed ID: 27849179 Enrichment of Root Endophytic Bacteria from Populus Deltoides and Single-Cell-Genomics Analysis Applied and Environmental Microbiology. Sep, 2016 | Pubmed ID: 27422831 While-you-wait Proteins? Producing Biomolecules at the Point of Need Expert Review of Proteomics. Aug, 2016 | Pubmed ID: 27402489 Two Poplar-Associated Bacterial Isolates Induce Additive Favorable Responses in a Constructed Plant-Microbiome System Frontiers in Plant Science. 2016 | Pubmed ID: 27200001 Stochastic Assembly of Bacteria in Microwell Arrays Reveals the Importance of Confinement in Community Development PloS One. 2016 | Pubmed ID: 27152511 A Carotenoid-Deficient Mutant in Pantoea Sp. YR343, a Bacteria Isolated from the Rhizosphere of Populus Deltoides, Is Defective in Root Colonization Frontiers in Microbiology. 2016 | Pubmed ID: 27148182 Toward Microfluidic Reactors for Cell-Free Protein Synthesis at the Point-of-Care Small (Weinheim an Der Bergstrasse, Germany). Feb, 2016 | Pubmed ID: 26690885 Microstencils to Generate Defined, Multi-species Patterns of Bacteria Biomicrofluidics. Nov, 2015 | Pubmed ID: 26594264 Fabrication of Nanoporous Membranes for Tuning Microbial Interactions and Biochemical Reactions Journal of Vacuum Science and Technology. B, Nanotechnology & Microelectronics : Materials, Processing, Measurement, & Phenomena : JVST B. Nov, 2015 | Pubmed ID: 26543684 Metabolic Functions of Pseudomonas Fluorescens Strains from Populus Deltoides Depend on Rhizosphere or Endosphere Isolation Compartment Frontiers in Microbiology. 2015 | Pubmed ID: 26528266 New Surface Radiolabeling Schemes of Super Paramagnetic Iron Oxide Nanoparticles (SPIONs) for Biodistribution Studies Nanoscale. Apr, 2015 | Pubmed ID: 25790032 Microstructured Block Copolymer Surfaces for Control of Microbe Adhesion and Aggregation Biosensors. Mar, 2014 | Pubmed ID: 25587410 Evaluation and Validation of De Novo and Hybrid Assembly Techniques to Derive High-quality Genome Sequences Bioinformatics (Oxford, England). Oct, 2014 | Pubmed ID: 24930142 Multi-input Regulation and Logic with T7 Promoters in Cells and Cell-free Systems PloS One. 2013 | Pubmed ID: 24194933 Enteroaggregative Escherichia Coli: Surface Protein Dispersin Increases Bacterial Uptake of Ciprofloxacin International Journal of Antimicrobial Agents. Nov, 2013 | Pubmed ID: 24011504 Layer-by-layer Templated Assembly of Silica at the Nanoscale Langmuir : the ACS Journal of Surfaces and Colloids. Feb, 2013 | Pubmed ID: 23360298 Relating Nanomaterial Properties and Microbial Toxicity Nanoscale. Jan, 2013 | Pubmed ID: 23203029 Monodisperse Alginate Microgel Formation in a Three-dimensional Microfluidic Droplet Generator Biomicrofluidics. 2012 | Pubmed ID: 24198865 Twenty-one Genome Sequences from Pseudomonas Species and 19 Genome Sequences from Diverse Bacteria Isolated from the Rhizosphere and Endosphere of Populus Deltoides Journal of Bacteriology. Nov, 2012 | Pubmed ID: 23045501 Draft Genome Sequence of Rhizobium Sp. Strain PDO1-076, a Bacterium Isolated from Populus Deltoides Journal of Bacteriology. May, 2012 | Pubmed ID: 22493196 Pseudomonas Fluorescens Induces Strain-dependent and Strain-independent Host Plant Responses in Defense Networks, Primary Metabolism, Photosynthesis, and Fitness Molecular Plant-microbe Interactions : MPMI. Jun, 2012 | Pubmed ID: 22375709 Citotoxicidad Inducida Por Nanocrystallites De Plata De Ingeniería Depende De Revestimientos Superficiales Y Tipos De Células Langmuir : the ACS Journal of Surfaces and Colloids. Feb, 2012 | Pubmed ID: 22216981 Reacciones Enzimáticas En Contenedores Nanoporous, Volumen Picolitros Analytical Chemistry. Jan, 2012 | Pubmed ID: 22148720 Expresión De Optimización Y Redes Sintéticas De Genes En Sistemas Libres De Células Nucleic Acids Research. Dec, 2011 | Pubmed ID: 22180537 La Quimiotaxis-como Che1 Camino Tiene Un Papel Indirecto En Las Propiedades De Celda Adhesivas De Azospirillum Brasilense FEMS Microbiology Letters. Oct, 2011 | Pubmed ID: 22092709 Monodispersas Biocompatibles Nanopartículas De Plata Sulfuro: Biosíntesis Extracelular Facile Uso De La γ-proteobacteria, Shewanella Oneidensis Acta Biomaterialia. Dec, 2011 | Pubmed ID: 21798382 Distintas Comunidades Microbianas Dentro De La Endosphere Y La Rizosfera De Populus Deltoides Raíces Entre Los Distintos Tipos De Suelos Contrastantes Applied and Environmental Microbiology. Sep, 2011 | Pubmed ID: 21764952 Modelo De Comunicación Biológica En Un Nanofabricados Celular Imitan Impulsado Por Resonancia Estocástica Nano Communication Networks. Mar, 2011 | Pubmed ID: 21731597 Efectos De La Subcomisión De Las Concentraciones Mínimas Inhibitorias De Ciprofloxacina En Enteroagregante Escherichia Coli Y El Papel De La Proteína De Superficie Dispersin International Journal of Antimicrobial Agents. Jul, 2011 | Pubmed ID: 21570813 Biofabrication De Oro Esférica Discreta Nanopartículas Con El Oneidensis Bacteria Shewanella De Metal Para Reducir La Acta Biomaterialia. May, 2011 | Pubmed ID: 21241833 Caracterización De La Superficie Celular Y Remodelación De La Matriz Extracelular De Azospirillum Brasilense Quimiotaxis De Tipo 1 Mutantes De La Ruta De Transducción De Señales Por Microscopía De Fuerza Atómica FEMS Microbiology Letters. Jan, 2011 | Pubmed ID: 21105907 Nanostructured Silicon Membranes for Control of Molecular Transport Journal of Vacuum Science and Technology. B, Nanotechnology & Microelectronics : Materials, Processing, Measurement, & Phenomena : JVST B. Nov, 2010 | Pubmed ID: 24932436 Efectos De óxido De Cerio Diseñado Nanopartículas Sobre El Crecimiento Bacteriano Y Viabilidad Applied and Environmental Microbiology. Dec, 2010 | Pubmed ID: 20952651 Microscopía De Fuerza Atómica De Muestras Biológicas Wiley Interdisciplinary Reviews. Nanomedicine and Nanobiotechnology. Nov-Dec, 2010 | Pubmed ID: 20672388 De Carga Y La Superficie Del Espacio Dependiente Del Transporte De Proteínas En Ambientes De Hacinamiento De Los Mensajes Nanotailored ACS Nano. Jun, 2010 | Pubmed ID: 20515056 Plata Nanocrystallites: Biofabrication Con Oneidensis Shewanella, Y Una Evaluación De Su Toxicidad Comparativo Sobre Las Bacterias Gram-negativas Y Gram-positivas Environmental Science & Technology. Jul, 2010 | Pubmed ID: 20509652 Desarrollo Y Fabricación De Silicio Nanoporoso Basados en Biorreactores Dentro De Un Chip De Microfluidos Lab on a Chip. May, 2010 | Pubmed ID: 20390137 Free Cell Traducción En Ingeniería Contenedores Picolitros De Volumen Annual ORNL Biomedical Science and Engineering Center Conference ORNL Biomedical Science and Engineering Center Conference. Jun, 2009 | Pubmed ID: 21278819 Un Ensayo En Vivo De Imágenes Basada En La Detección De Interacciones Entre Proteínas En Una Amplia Gama De Afinidades De Unión Analytical Biochemistry. Dec, 2009 | Pubmed ID: 19698693 Efectos De Las Dimensiones De La Ultramicroelectrodo Electropolimerización De Polipirrol Journal of Applied Physics. Jun, 2009 | Pubmed ID: 19657404 Control De Posición De Catalizador De Nanopartículas Para La Síntesis De Agrupaciones De Alta Densidad Nanofibras De Carbono Carbon. 2008 | Pubmed ID: 19448842 Las Membranas Accionable Basado En Polipirrol Recubiertos Con Nanofibras De Carbono Alineados Verticalmente ACS Nano. Feb, 2008 | Pubmed ID: 19206624 Un Sistema General Para El Estudio De Interacciones Proteína-proteína En Bacterias Gram-negativas Journal of Proteome Research. Aug, 2008 | Pubmed ID: 18590317 El Control De Las Dimensiones De Las Estructuras Nanofibras De Carbono a Través Del Electropolimerización De Pirrol Synthetic Metals. Apr, 2007 | Pubmed ID: 18431459 Nano-habilitado Para La Biología Sintética Molecular Systems Biology. 2007 | Pubmed ID: 17625513 El Pelón Casi Desnudas (Hr (N)) Mutación Altera La Formación Del Pelo, Pero No Se Debe a Una Mutación En La Región De Codificación Sin Pelo The Journal of Investigative Dermatology. Jul, 2007 | Pubmed ID: 17330134 Evaluación De Un Sistema De Sonda De Muestreo De Superficie De Electrospray Espectrometría De Masas Para El Análisis De Los Depositados En Superficie Y Affinity Capturado-Proteínas Rapid Communications in Mass Spectrometry : RCM. 2006 | Pubmed ID: 16521171 Beadmilling Optimizada De Los Tejidos De Alto Rendimiento Para La Producción De ARN Y Análisis De Microarrays Basados en Analytical Biochemistry. Sep, 2004 | Pubmed ID: 15301954 AFM Imaging of Bacteria in Liquid Media Immobilized on Gelatin Coated Mica Surfaces Ultramicroscopy. Oct-Nov, 2003 | Pubmed ID: 12801673 Toma De Huellas Dactilares De 16S RRNA Genes Procariotas Utilizando Microarrays De Hibridación Y Oligodesoxirribonucleótido Virtual Nucleic Acids Research. Jan, 2003 | Pubmed ID: 12527788 Genomas Para La Vida ", Centro De Sistemas Moleculares Y Celulares": Un Programa De Investigación Para La Identificación Y Caracterización De Complejos De Proteínas Omics : a Journal of Integrative Biology. 2002 | Pubmed ID: 12630408 Comparative Analyses of the Secondary Structures of Synthetic and Intracellular Yeast MFA2 MRNAs Proceedings of the National Academy of Sciences of the United States of America. Dec, 1998 | Pubmed ID: 9843938 Cromatografía líquida acoplada a la detección de índice de refracción o espectrometría de masas para perfiles de metabolitos en sistemas libres de células basados en lisato Jaime Lorenzo N. Dinglasan1,3, David T. Reeves2,3, Robert L. Hettich3, Mitchel J. Doktycz3 1Graduate School of Genome Science & Technology, University of Tennessee Knoxville, 2Bredesen Center for Interdisciplinary Research, University of Tennessee Knoxville, 3Biosciences Division, Oak Ridge National Laboratory JoVE 62852 Bioengineering La morfología del pelo de la raíz de plántulas de Arabidopsis en una plataforma de microfluídica de dos capas de imagen Jayde A. Aufrecht1,2, Jennifer M. Ryan3, Sahar Hasim4, David P. Allison2,3, Andreas Nebenführ3, Mitchel J. Doktycz1,2, Scott T. Retterer1,2 1Bredesen Center for Interdisciplinary Research and Graduate Education, University of Tennessee, 2Bioscience Division and Center for Nanophase Materials Sciences, Oak Ridge national Laboratory, 3Department of Biochemistry and Cellular and Molecular Biology, University of Tennessee, 4Department of Microbiology, University of Tennessee JoVE 55971 Bioengineering
Cromatografía líquida acoplada a la detección de índice de refracción o espectrometría de masas para perfiles de metabolitos en sistemas libres de células basados en lisato Jaime Lorenzo N. Dinglasan1,3, David T. Reeves2,3, Robert L. Hettich3, Mitchel J. Doktycz3 1Graduate School of Genome Science & Technology, University of Tennessee Knoxville, 2Bredesen Center for Interdisciplinary Research, University of Tennessee Knoxville, 3Biosciences Division, Oak Ridge National Laboratory JoVE 62852 Bioengineering
La morfología del pelo de la raíz de plántulas de Arabidopsis en una plataforma de microfluídica de dos capas de imagen Jayde A. Aufrecht1,2, Jennifer M. Ryan3, Sahar Hasim4, David P. Allison2,3, Andreas Nebenführ3, Mitchel J. Doktycz1,2, Scott T. Retterer1,2 1Bredesen Center for Interdisciplinary Research and Graduate Education, University of Tennessee, 2Bioscience Division and Center for Nanophase Materials Sciences, Oak Ridge national Laboratory, 3Department of Biochemistry and Cellular and Molecular Biology, University of Tennessee, 4Department of Microbiology, University of Tennessee JoVE 55971 Bioengineering