Paul Blainey

Publications

• Sampling Distributions and the Bootstrap
  Nature Methods. Jun, 2015  |   Pubmed ID: 26221652
• Points of Significance: Nested Designs. For Studies with Hierarchical Noise Sources, Use a Nested Analysis of Variance Approach
  Nature Methods. Oct, 2014  |   Pubmed ID: 25392877
• Optimal Estimation of Diffusion Coefficients from Single-particle Trajectories
  Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. Feb, 2014  |   Pubmed ID: 25353527
• Points of Significance: Replication
  Nature Methods. Sep, 2014  |   Pubmed ID: 25317452
• Laser Microdissection of the Alveolar Duct Enables Single-cell Genomic Analysis
  Frontiers in Oncology. 2014  |   Pubmed ID: 25309876
• Dissecting Genomic Diversity, One Cell at a Time
  Nature Methods. Jan, 2014  |   Pubmed ID: 24524132
• Optofluidic Cell Selection from Complex Microbial Communities for Single-genome Analysis
  Methods in Enzymology. 2013  |   Pubmed ID: 24060116
• Single-cell and Metagenomic Analyses Indicate a Fermentative and Saccharolytic Lifestyle for Members of the OP9 Lineage
  Nature Communications. 2013  |   Pubmed ID: 23673639
• The Future is Now: Single-cell Genomics of Bacteria and Archaea
  FEMS Microbiology Reviews. May, 2013  |   Pubmed ID: 23298390
• Regulation of a Viral Proteinase by a Peptide and DNA in One-dimensional Space: IV. Viral Proteinase Slides Along DNA to Locate and Process Its Substrates
  The Journal of Biological Chemistry. Jan, 2013  |   Pubmed ID: 23043138
• Regulation of a Viral Proteinase by a Peptide and DNA in One-dimensional Space: II. Adenovirus Proteinase is Activated in an Unusual One-dimensional Biochemical Reaction
  The Journal of Biological Chemistry. Jan, 2013  |   Pubmed ID: 23043137
• Regulation of a Viral Proteinase by a Peptide and DNA in One-dimensional Space: I. Binding to DNA AND to Hexon of the Precursor to Protein VI, PVI, of Human Adenovirus
  The Journal of Biological Chemistry. Jan, 2013  |   Pubmed ID: 23043136
• A Single-cell Genome for Thiovulum Sp
  Applied and Environmental Microbiology. Dec, 2012  |   Pubmed ID: 23023751
• Quantitative Analysis of the Human Airway Microbial Ecology Reveals a Pervasive Signature for Cystic Fibrosis
  Science Translational Medicine. Sep, 2012  |   Pubmed ID: 23019655
• Single-cell Sequencing Provides Clues About the Host Interactions of Segmented Filamentous Bacteria (SFB)
  Genome Research. Jun, 2012  |   Pubmed ID: 22434425
• Genomic Analysis at the Single-cell Level
  Annual Review of Genetics. 2011  |   Pubmed ID: 21942365
• Partial Genome Assembly for a Candidate Division OP11 Single Cell from an Anoxic Spring (Zodletone Spring, Oklahoma)
  Applied and Environmental Microbiology. Nov, 2011  |   Pubmed ID: 21908640
• Genome of a Low-salinity Ammonia-oxidizing Archaeon Determined by Single-cell and Metagenomic Analysis
  PloS One. 2011  |   Pubmed ID: 21364937
• Digital MDA for Enumeration of Total Nucleic Acid Contamination
  Nucleic Acids Research. Mar, 2011  |   Pubmed ID: 21071419
• Nonspecifically Bound Proteins Spin While Diffusing Along DNA
  Nature Structural & Molecular Biology. Dec, 2009  |   Pubmed ID: 19898474
• Digital PCR Provides Sensitive and Absolute Calibration for High Throughput Sequencing
  BMC Genomics. 2009  |   Pubmed ID: 19298667
• Diffusion Constant of a Nonspecifically Bound Protein Undergoing Curvilinear Motion Along DNA
  The Journal of Physical Chemistry. B. May, 2008  |   Pubmed ID: 18321088
• Multiplexed Single-molecule Assay for Enzymatic Activity on Flow-stretched DNA
  Nature Methods. May, 2007  |   Pubmed ID: 17435763
• A Base-excision DNA-repair Protein Finds Intrahelical Lesion Bases by Fast Sliding in Contact with DNA
  Proceedings of the National Academy of Sciences of the United States of America. Apr, 2006  |   Pubmed ID: 16585517
• Single-molecule Kinetics of Lambda Exonuclease Reveal Base Dependence and Dynamic Disorder
  Science (New York, N.Y.). Aug, 2003  |   Pubmed ID: 12947199