Philip Payne

Publications

• OPEN DATA FOR DISCOVERY SCIENCE
  Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing. 2016  |   Pubmed ID: 27897016
• MicroRNA Profiling of Patient Plasma for Clinical Trials Using Bioinformatics and Biostatistical Approaches
  OncoTargets and Therapy. 2016  |   Pubmed ID: 27729802
• Global MicroRNA Profiling for Diagnostic Appraisal of Melanocytic Spitz Tumors
  The Journal of Surgical Research. Oct, 2016  |   Pubmed ID: 27664883
• Electronic Health Record-based Assessment of Cardiovascular Health: The Stroke Prevention in Healthcare Delivery Environments (SPHERE) Study
  Preventive Medicine Reports. Dec, 2016  |   Pubmed ID: 27486559
• Classification of Indeterminate Melanocytic Lesions by MicroRNA Profiling
  Annals of Surgical Oncology. Jul, 2016  |   Pubmed ID: 27469124
• 'RE:fine Drugs': an Interactive Dashboard to Access Drug Repurposing Opportunities
  Database : the Journal of Biological Databases and Curation. 2016  |   Pubmed ID: 27189611
• Rethinking the Role and Impact of Health Information Technology: Informatics As an Interventional Discipline
  BMC Medical Informatics and Decision Making. Mar, 2016  |   Pubmed ID: 27025583
• The Geographic Distribution of Cardiovascular Health in the Stroke Prevention in Healthcare Delivery Environments (SPHERE) Study
  Journal of Biomedical Informatics. Apr, 2016  |   Pubmed ID: 26828957
• DISCOVERY OF MOLECULARLY TARGETED THERAPIES
  Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing. 2016  |   Pubmed ID: 26776168
• Interdisciplinary Training to Build an Informatics Workforce for Precision Medicine
  Applied & Translational Genomics. Sep, 2015  |   Pubmed ID: 27054076
• A Novel Multiple Choice Question Generation Strategy: Alternative Uses for Controlled Vocabulary Thesauri in Biomedical-Sciences Education
  AMIA ... Annual Symposium Proceedings. AMIA Symposium. 2015  |   Pubmed ID: 26958222
• Gene Expression Profiling of the Human Natural Killer Cell Response to Fc Receptor Activation: Unique Enhancement in the Presence of Interleukin-12
  BMC Medical Genomics. Oct, 2015  |   Pubmed ID: 26470881
• ResearchIQ: Design of a Semantically Anchored Integrative Query Tool
  AMIA Joint Summits on Translational Science Proceedings. AMIA Joint Summits on Translational Science. 2015  |   Pubmed ID: 26306248
• EHR-based Visualization Tool: Adoption Rates, Satisfaction, and Patient Outcomes
  EGEMS (Washington, DC). 2015  |   Pubmed ID: 26290891
• Real-time Data Fusion Platforms: The Need of Multi-dimensional Data-driven Research in Biomedical Informatics
  Studies in Health Technology and Informatics. 2015  |   Pubmed ID: 26262406
• A Metadata Based Knowledge Discovery Methodology for Seeding Translational Research
  Studies in Health Technology and Informatics. 2015  |   Pubmed ID: 26262370
• Text Mining and Data Modeling of Karyotypes to Aid in Drug Repurposing Efforts
  Studies in Health Technology and Informatics. 2015  |   Pubmed ID: 26262336
• Conceptual Knowledge Discovery in Databases for Drug Combinations Predictions in Malignant Melanoma
  Studies in Health Technology and Informatics. 2015  |   Pubmed ID: 26262134
• Domain Analysis of Integrated Data to Reduce Cost Associated with Liver Disease
  Studies in Health Technology and Informatics. 2015  |   Pubmed ID: 26262083
• Sustainability Through Technology Licensing and Commercialization: Lessons Learned from the TRIAD Project
  EGEMS (Washington, DC). 2014  |   Pubmed ID: 25848609
• Enabling Online Studies of Conceptual Relationships Between Medical Terms: Developing an Efficient Web Platform
  JMIR Medical Informatics. Oct, 2014  |   Pubmed ID: 25600290
• Advancing Methodologies in Clinical Research Informatics (CRI): Foundational Work for a Maturing Field
  Journal of Biomedical Informatics. Dec, 2014  |   Pubmed ID: 25484113
• Towards Symbiosis in Knowledge Representation and Natural Language Processing for Structuring Clinical Practice Guidelines
  Studies in Health Technology and Informatics. 2014  |   Pubmed ID: 24943582
• Community-level Determinants of Obesity: Harnessing the Power of Electronic Health Records for Retrospective Data Analysis
  BMC Medical Informatics and Decision Making. May, 2014  |   Pubmed ID: 24886134
• Assessment of Life's Simple 7 in the Primary Care Setting: the Stroke Prevention in Healthcare Delivery EnviRonmEnts (SPHERE) Study
  Contemporary Clinical Trials. Jul, 2014  |   Pubmed ID: 24721482
• Time Motion Studies in Healthcare: What Are We Talking About?
  Journal of Biomedical Informatics. Jun, 2014  |   Pubmed ID: 24607863
• Scalable Architecture for Federated Translational Inquiries Network (SAFTINet) Technology Infrastructure for a Distributed Data Network
  EGEMS (Washington, DC). 2013  |   Pubmed ID: 25848567
• Advancing User Experience Research to Facilitate and Enable Patient-centered Research: Current State and Future Directions
  EGEMS (Washington, DC). 2013  |   Pubmed ID: 25848566
• Recommendations for the Use of Operational Electronic Health Record Data in Comparative Effectiveness Research
  EGEMS (Washington, DC). 2013  |   Pubmed ID: 25848563
• Inter-observer Reliability Assessments in Time Motion Studies: the Foundation for Meaningful Clinical Workflow Analysis
  AMIA ... Annual Symposium Proceedings. AMIA Symposium. 2013  |   Pubmed ID: 24551381
• EHR-based Clinical Trial Alert Effects on Recruitment to a Neurology Trial Across Institutions: Interim Analysis of a Randomized Controlled Study
  AMIA Joint Summits on Translational Science Proceedings. AMIA Joint Summits on Translational Science. 2013  |   Pubmed ID: 24303248
• Evidence Generating Medicine: Redefining the Research-practice Relationship to Complete the Evidence Cycle
  Medical Care. Aug, 2013  |   Pubmed ID: 23793052
• Knowledge Management and Informatics Considerations for Comparative Effectiveness Research: a Case-driven Exploration
  Medical Care. Aug, 2013  |   Pubmed ID: 23793050
• Caveats for the Use of Operational Electronic Health Record Data in Comparative Effectiveness Research
  Medical Care. Aug, 2013  |   Pubmed ID: 23774517
• People, Organizational, and Leadership Factors Impacting Informatics Support for Clinical and Translational Research
  BMC Medical Informatics and Decision Making. Feb, 2013  |   Pubmed ID: 23388243
• Towards a "4I" Approach to Personalized Healthcare
  Clinical and Translational Medicine. Jul, 2012  |   Pubmed ID: 23369359
• Time Capture Tool (TimeCaT): Development of a Comprehensive Application to Support Data Capture for Time Motion Studies
  AMIA ... Annual Symposium Proceedings. AMIA Symposium. 2012  |   Pubmed ID: 23304332
• Chapter 1: Biomedical Knowledge Integration
  PLoS Computational Biology. 2012  |   Pubmed ID: 23300416
• Applying Knowledge-anchored Hypothesis Discovery Methods to Advance Clinical and Translational Research: the OAMiner Project
  Journal of the American Medical Informatics Association : JAMIA. Nov-Dec, 2012  |   Pubmed ID: 22647689
• Computational Challenges and Human Factors Influencing the Design and Use of Clinical Research Participant Eligibility Pre-screening Tools
  BMC Medical Informatics and Decision Making. May, 2012  |   Pubmed ID: 22646313
• K-Neighborhood Decentralization: A Comprehensive Solution to Index the UMLS for Large Scale Knowledge Discovery
  Journal of Biomedical Informatics. Dec, 2011  |   Pubmed ID: 22154838
• The Joint Summits on Translational Science: Crossing the Translational Chasm
  Journal of Biomedical Informatics. Dec, 2011  |   Pubmed ID: 22138364
• Selected Papers from the 2011 Summit on Clinical Research Informatics
  Journal of Biomedical Informatics. Dec, 2011  |   Pubmed ID: 22138363
• The TOKEn Project: Knowledge Synthesis for in Silico Science
  Journal of the American Medical Informatics Association : JAMIA. Dec, 2011  |   Pubmed ID: 21984589
• Research-IQ: Development and Evaluation of an Ontology-anchored Integrative Query Tool
  Journal of Biomedical Informatics. Dec, 2011  |   Pubmed ID: 21821150
• Transactional Database Transformation and Its Application in Prioritizing Human Disease Genes
  IEEE/ACM Transactions on Computational Biology and Bioinformatics / IEEE, ACM. Mar, 2011  |   Pubmed ID: 21422495
• Health-care Hit or Miss?
  Nature. Feb, 2011  |   Pubmed ID: 21331020
• Improving Clinical Trial Participant Tracking Tools Using Knowledge-anchored Design Methodologies
  Applied Clinical Informatics. 2010  |   Pubmed ID: 22132037
• Evaluating the Impact of Conceptual Knowledge Engineering on the Design and Usability of a Clinical and Translational Science Collaboration Portal
  AMIA Joint Summits on Translational Science Proceedings. AMIA Joint Summits on Translational Science. Mar, 2010  |   Pubmed ID: 21347146
• The TRITON Project: Design and Implementation of an Integrative Translational Research Information Management Platform
  AMIA ... Annual Symposium Proceedings. AMIA Symposium. Nov, 2010  |   Pubmed ID: 21347052
• Standardizing Clinical Trials Workflow Representation in UML for International Site Comparison
  PloS One. Nov, 2010  |   Pubmed ID: 21085484
• Using Gene Co-expression Network Analysis to Predict Biomarkers for Chronic Lymphocytic Leukemia
  BMC Bioinformatics. 2010  |   Pubmed ID: 21044363
• Multi-dimensional Discovery of Biomarker and Phenotype Complexes
  BMC Bioinformatics. 2010  |   Pubmed ID: 21044361
• Foundational Biomedical Informatics Research in the Clinical and Translational Science Era: a Call to Action
  Journal of the American Medical Informatics Association : JAMIA. Nov-Dec, 2010  |   Pubmed ID: 20962120
• Conceptual Dissonance: Evaluating the Efficacy of Natural Language Processing Techniques for Validating Translational Knowledge Constructs
  Summit on Translational Bioinformatics. Mar, 2009  |   Pubmed ID: 21347178
• Adoption and Adaptation of CaGrid for CTSA
  Summit on Translational Bioinformatics. Mar, 2009  |   Pubmed ID: 21347169
• Development of an Agile Knowledge Engineering Framework in Support of Multi-disciplinary Translational Research
  Summit on Translational Bioinformatics. Mar, 2009  |   Pubmed ID: 21347164
• Biomedical Informatics and Outcomes Research: Enabling Knowledge-driven Health Care
  Circulation. Dec, 2009  |   Pubmed ID: 19996023
• Translational Informatics: Enabling High-throughput Research Paradigms
  Physiological Genomics. Nov, 2009  |   Pubmed ID: 19737991
• Clinical Research Informatics: Challenges, Opportunities and Definition for an Emerging Domain
  Journal of the American Medical Informatics Association : JAMIA. May-Jun, 2009  |   Pubmed ID: 19261934
• Validation of an LC-MS Based Approach for Profiling Histones in Chronic Lymphocytic Leukemia
  Proteomics. Mar, 2009  |   Pubmed ID: 19253275
• A Knowledge-anchored Integrative Image Search and Retrieval System
  Journal of Digital Imaging. Apr, 2009  |   Pubmed ID: 18040742
• Ontology-anchored Approaches to Conceptual Knowledge Discovery in a Multi-dimensional Research Data Repository
  Summit on Translational Bioinformatics. Mar, 2008  |   Pubmed ID: 21347129
• E-Science, CaGrid, and Translational Biomedical Research
  Computer. Nov, 2008  |   Pubmed ID: 21311723
• Innovative Applications of an Enterprise-wide Information Warehouse
  AMIA ... Annual Symposium Proceedings. AMIA Symposium. Nov, 2008  |   Pubmed ID: 18999273
• Leveraging an Existing Data Warehouse to Annotate Workflow Models for Operations Research and Optimization
  AMIA ... Annual Symposium Proceedings. AMIA Symposium. Nov, 2008  |   Pubmed ID: 18999220
• Implementation of a Metadata Architecture and Knowledge Collection to Support Semantic Interoperability in an Enterprise Data Warehouse
  AMIA ... Annual Symposium Proceedings. AMIA Symposium. Nov, 2008  |   Pubmed ID: 18999040
• Supporting the Design of Translational Clinical Studies Through the Generation and Verification of Conceptual Knowledge-anchored Hypotheses
  AMIA ... Annual Symposium Proceedings. AMIA Symposium. Nov, 2008  |   Pubmed ID: 18998958
• Integrating Web Portlet Technologies with CaGrid to Enable Rapid Application Development: the CRC Patient Study Calendar
  AMIA ... Annual Symposium Proceedings. AMIA Symposium. Nov, 2008  |   Pubmed ID: 18998940
• The Design of a Pre-encounter Clinical Trial Screening Tool: ASAP
  AMIA ... Annual Symposium Proceedings. AMIA Symposium. Nov, 2008  |   Pubmed ID: 18998826
• A Roadmap for CaGrid, an Enterprise Grid Architecture for Biomedical Research
  Studies in Health Technology and Informatics. 2008  |   Pubmed ID: 18560123
• Integrating Heterogeneous Rules-engine Technologies with CaGrid
  AMIA ... Annual Symposium Proceedings. AMIA Symposium. Oct, 2007  |   Pubmed ID: 18694196
• A Framework for Workflow-based Clinical Research Billing Disambiguation
  AMIA ... Annual Symposium Proceedings. AMIA Symposium. Oct, 2007  |   Pubmed ID: 18694169
• Development of an Ontology-anchored Data Warehouse Meta-model
  AMIA ... Annual Symposium Proceedings. AMIA Symposium. Oct, 2007  |   Pubmed ID: 18694100
• Evaluating an NLP-based Approach to Modeling Computable Clinical Trial Eligibility Criteria
  AMIA ... Annual Symposium Proceedings. AMIA Symposium. Oct, 2007  |   Pubmed ID: 18693979
• Modeling Participant-related Clinical Research Events Using Conceptual Knowledge Acquisition Techniques
  AMIA ... Annual Symposium Proceedings. AMIA Symposium. Oct, 2007  |   Pubmed ID: 18693905
• Identifying Challenges and Opportunities in Clinical Research Informatics: Analysis of a Facilitated Discussion at the 2006 AMIA Annual Symposium
  AMIA ... Annual Symposium Proceedings. AMIA Symposium. Oct, 2007  |   Pubmed ID: 18693830
• A Day in the Life of a Clinical Research Coordinator: Observations from Community Practice Settings
  Studies in Health Technology and Informatics. 2007  |   Pubmed ID: 17911716
• Conceptual Knowledge Acquisition in Biomedicine: A Methodological Review
  Journal of Biomedical Informatics. Oct, 2007  |   Pubmed ID: 17482521
• Human Computer Interaction Issues in Clinical Trials Management Systems
  AMIA ... Annual Symposium Proceedings. AMIA Symposium. 2006  |   Pubmed ID: 17238728
• Consensus-based Construction of a Taxonomy of Clinical Trial Tasks
  AMIA ... Annual Symposium Proceedings. AMIA Symposium. 2006  |   Pubmed ID: 17238678
• Coverage of Clinical Trials Tasks in Existing Ontologies
  AMIA ... Annual Symposium Proceedings. AMIA Symposium. 2006  |   Pubmed ID: 17238522
• Novel Techniques for Survey and Classification Studies to Improve Patient Centered Websites
  AMIA ... Annual Symposium Proceedings. AMIA Symposium. 2006  |   Pubmed ID: 17238510
• Modeling Clinical Trials Workflow in Community Practice Settings
  AMIA ... Annual Symposium Proceedings. AMIA Symposium. 2006  |   Pubmed ID: 17238375
• Breaking the Translational Barriers: the Value of Integrating Biomedical Informatics and Translational Research
  Journal of Investigative Medicine : the Official Publication of the American Federation for Clinical Research. May, 2005  |   Pubmed ID: 15974245
• Quantifying Visual Similarity in Clinical Iconic Graphics
  Journal of the American Medical Informatics Association : JAMIA. May-Jun, 2005  |   Pubmed ID: 15684136
• Quantifying Visual Similarity in Clinical Iconic Graphics
  AMIA ... Annual Symposium Proceedings. AMIA Symposium. 2003  |   Pubmed ID: 14728519
• CRC Clinical Trials Management System (CTMS): an Integrated Information Management Solution for Collaborative Clinical Research
  AMIA ... Annual Symposium Proceedings. AMIA Symposium. 2003  |   Pubmed ID: 14728471
• CRC Tissue Core Management System (TCMS): Integration of Basic Science and Clinical Data for Translational Research
  AMIA ... Annual Symposium Proceedings. AMIA Symposium. 2003  |   Pubmed ID: 14728358