Raluca Gordan Center for Genomic and Computational Biology, Department of Biostatistics and Bioinformatics Duke University Biography Publications Institution JoVE Articles Raluca Gordan has not added a biography. If you are Raluca Gordan and would like to personalize this page please email our Author Liaison for assistance. Publications Unexpected Implications of STAT3 Acetylation Revealed by Genetic Encoding of Acetyl-lysine Biochimica Et Biophysica Acta. General Subjects. Sep, 2019 | Pubmed ID: 31170499 QBiC-Pred: Quantitative Predictions of Transcription Factor Binding Changes Due to Sequence Variants Nucleic Acids Research. Jul, 2019 | Pubmed ID: 31114870 DNA Sequence Context Controls the Binding and Processivity of the T7 DNA Primase IScience. Apr, 2018 | Pubmed ID: 30428370 Genetic Variation Determines VEGF-A Plasma Levels in Cancer Patients Scientific Reports. 11, 2018 | Pubmed ID: 30397360 The Vitamin D Receptor Gene As a Determinant of Survival in Pancreatic Cancer Patients: Genomic Analysis and Experimental Validation PloS One. 2018 | Pubmed ID: 30107003 Toward Deciphering the Mechanistic Role of Variations in the Rep1 Repeat Site in the Transcription Regulation of SNCA Gene Neurogenetics. Aug, 2018 | Pubmed ID: 29730780 Divergence in DNA Specificity Among Paralogous Transcription Factors Contributes to Their Differential In Vivo Binding Cell Systems. Apr, 2018 | Pubmed ID: 29605182 Incomplete MyoD-induced Transdifferentiation is Associated with Chromatin Remodeling Deficiencies Nucleic Acids Research. Nov, 2017 | Pubmed ID: 28977539 Inkjet-printed Point-of-care Immunoassay on a Nanoscale Polymer Brush Enables Subpicomolar Detection of Analytes in Blood Proceedings of the National Academy of Sciences of the United States of America. 08, 2017 | Pubmed ID: 28784765 Quantifying the Impact of Non-coding Variants on Transcription Factor-DNA Binding Research in Computational Molecular Biology : ... Annual International Conference, RECOMB ... : Proceedings. RECOMB (Conference : 2005-). May, 2017 | Pubmed ID: 28691125 Whole-Genome and Epigenomic Landscapes of Etiologically Distinct Subtypes of Cholangiocarcinoma Cancer Discovery. 10, 2017 | Pubmed ID: 28667006 Expression Level is a Key Determinant of E2F1-mediated Cell Fate Cell Death and Differentiation. 04, 2017 | Pubmed ID: 28211871 Establishment of Expression in the SHORTROOT-SCARECROW Transcriptional Cascade Through Opposing Activities of Both Activators and Repressors Developmental Cell. 12, 2016 | Pubmed ID: 27923776 Transcription Factor-DNA Binding Motifs in Saccharomyces Cerevisiae: Tools and Resources Cold Spring Harbor Protocols. 11, 2016 | Pubmed ID: 27803259 Punctuated Evolution and Transitional Hybrid Network in an Ancestral Cell Cycle of Fungi ELife. 05, 2016 | Pubmed ID: 27162172 HDAC Inhibitors Cause Site-specific Chromatin Remodeling at PU.1-bound Enhancers in K562 Cells Epigenetics & Chromatin. 2016 | Pubmed ID: 27087856 Nonconsensus Protein Binding to Repetitive DNA Sequence Elements Significantly Affects Eukaryotic Genomes PLoS Computational Biology. Aug, 2015 | Pubmed ID: 26285121 Quantitative Modeling of Transcription Factor Binding Specificities Using DNA Shape Proceedings of the National Academy of Sciences of the United States of America. Apr, 2015 | Pubmed ID: 25775564 Human-chimpanzee Differences in a FZD8 Enhancer Alter Cell-cycle Dynamics in the Developing Neocortex Current Biology : CB. Mar, 2015 | Pubmed ID: 25702574 Protein-DNA Binding in the Absence of Specific Base-pair Recognition Proceedings of the National Academy of Sciences of the United States of America. Dec, 2014 | Pubmed ID: 25313048 Sequence Specificity Incompletely Defines the Genome-wide Occupancy of Myc Genome Biology. 2014 | Pubmed ID: 25287278 Absence of a Simple Code: How Transcription Factors Read the Genome Trends in Biochemical Sciences. Sep, 2014 | Pubmed ID: 25129887 COUGER--co-factors Associated with Uniquely-bound Genomic Regions Nucleic Acids Research. Jul, 2014 | Pubmed ID: 24861628 Protein-DNA Binding: Complexities and Multi-protein Codes Nucleic Acids Research. Feb, 2014 | Pubmed ID: 24243859 TFBSshape: a Motif Database for DNA Shape Features of Transcription Factor Binding Sites Nucleic Acids Research. Jan, 2014 | Pubmed ID: 24214955 Stability Selection for Regression-based Models of Transcription Factor-DNA Binding Specificity Bioinformatics (Oxford, England). Jul, 2013 | Pubmed ID: 23812975 Genomic Regions Flanking E-box Binding Sites Influence DNA Binding Specificity of BHLH Transcription Factors Through DNA Shape Cell Reports. Apr, 2013 | Pubmed ID: 23562153 Identification of Cell Cycle-regulated, Putative Hyphal Genes in Candida Albicans Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing. 2012 | Pubmed ID: 22174285 Identification of Tat-SF1 Cellular Targets by Exon Array Analysis Reveals Dual Roles in Transcription and Splicing RNA (New York, N.Y.). Apr, 2011 | Pubmed ID: 21282347 Finding Regulatory DNA Motifs Using Alignment-free Evolutionary Conservation Information Nucleic Acids Research. Apr, 2010 | Pubmed ID: 20047961 Drosophila ORC Localizes to Open Chromatin and Marks Sites of Cohesin Complex Loading Genome Research. Feb, 2010 | Pubmed ID: 19996087 Distinguishing Direct Versus Indirect Transcription Factor-DNA Interactions Genome Research. Nov, 2009 | Pubmed ID: 19652015 Using DNA Duplex Stability Information for Transcription Factor Binding Site Discovery Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing. 2008 | Pubmed ID: 18229707 A Nucleosome-guided Map of Transcription Factor Binding Sites in Yeast PLoS Computational Biology. Nov, 2007 | Pubmed ID: 17997593 Informative Priors Based on Transcription Factor Structural Class Improve De Novo Motif Discovery Bioinformatics (Oxford, England). Jul, 2006 | Pubmed ID: 16873497 DNA Sequence anerkjennelse av DNA Primase ved hjelp av høy gjennomstrømming Primase profilering Stefan Ilic1, Shira Cohen1, Ariel Afek2, Raluca Gordan2, David B. Lukatsky1, Barak Akabayov1 1Department of Chemistry, Ben-Gurion University of the Negev, 2Center for Genomic and Computational Biology, Department of Biostatistics and Bioinformatics, Duke University JoVE 59737 Biochemistry
DNA Sequence anerkjennelse av DNA Primase ved hjelp av høy gjennomstrømming Primase profilering Stefan Ilic1, Shira Cohen1, Ariel Afek2, Raluca Gordan2, David B. Lukatsky1, Barak Akabayov1 1Department of Chemistry, Ben-Gurion University of the Negev, 2Center for Genomic and Computational Biology, Department of Biostatistics and Bioinformatics, Duke University JoVE 59737 Biochemistry