Sarah Hainer Department of Biological Sciences University of Pittsburgh Biography Publications Institution JoVE Articles Sarah Hainer Sarah Hainer is an Assistant Professor in the Department of Biological Sciences at the University of Pittsburgh and a Member of the University of Pittsburgh Medical Center Hillman Cancer Center, having opened her lab in 2018.Dr. Hainer's research interests are in the fundamental regulation of cell fate, specifically focusing on the role of transcription and chromatin dynamics. The long-term goals of Dr. Hainer's research are to comprehensively understand the functions, targets, regulation, and mechanisms of action of non-coding RNAs (ncRNAs) and chromatin regulatory factors with critical functions in the embryonic stem (ES) cell gene regulatory network, through development, and in disease states. Active research areas in Dr. Hainer's laboratory include: identifying chromatin remodelers that regulate ncRNA expression; determining the function of two uncharacterized classes of ncRNAs in ES cells; characterizing molecular changes occurring in cancer cell lines with chromatin remodeler mutations; optimizing and expanding the utilization of a novel technique for profiling chromatin binding proteins, CUT&RUN. Enabling these studies, Dr. Hainer's research spans the disciplines of genomics, cell and molecular biology, biochemistry, and genetics. Publications Writing an Effective and Supportive Recommendation Letter The FEBS Journal. Jan, 2022 | Pubmed ID: 33665964 Transcription Factor Chromatin Profiling Genome-wide Using UliCUT&RUN in Single Cells and Individual Blastocysts Nature Protocols. 05, 2021 | Pubmed ID: 33911257 Building and Sustaining Mentor Interactions As a Mentee The FEBS Journal. Apr, 2021 | Pubmed ID: 33818917 PathSTORM: a Road to Early Cancer Detection Molecular & Cellular Oncology. Month, 2020 | Pubmed ID: 32944634 Non-Coding RNAs and Nucleosome Remodeling Complexes: An Intricate Regulatory Relationship Biology. Aug, 2020 | Pubmed ID: 32784701 Specialized RSC: Substrate Specificities for a Conserved Chromatin Remodeler BioEssays : News and Reviews in Molecular, Cellular and Developmental Biology. 07, 2020 | Pubmed ID: 32490565 Cellular Location of HNF4α is Linked With Terminal Liver Failure in Humans Hepatology Communications. Jun, 2020 | Pubmed ID: 32490322 Super-resolution Imaging Reveals the Evolution of Higher-order Chromatin Folding in Early Carcinogenesis Nature Communications. 04, 2020 | Pubmed ID: 32313005 Chromatin Regulation and Dynamics in Stem Cells Current Topics in Developmental Biology. Month, 2020 | Pubmed ID: 32220294 Genomic Methods in Profiling DNA Accessibility and Factor Localization Chromosome Research : an International Journal on the Molecular, Supramolecular and Evolutionary Aspects of Chromosome Biology. 03, 2020 | Pubmed ID: 31776829 Profiling of Pluripotency Factors in Single Cells and Early Embryos Cell. 05, 2019 | Pubmed ID: 30955888 High-Resolution Chromatin Profiling Using CUT&RUN Current Protocols in Molecular Biology. 04, 2019 | Pubmed ID: 30688406 Regulation of Chaperone Binding and Nucleosome Dynamics by Key Residues Within the Globular Domain of Histone H3 Epigenetics & Chromatin. Month, 2016 | Pubmed ID: 27134679 Identification of Mutant Versions of the Spt16 Histone Chaperone That Are Defective for Transcription-Coupled Nucleosome Occupancy in Saccharomyces Cerevisiae G3 (Bethesda, Md.). May, 2012 | Pubmed ID: 22670226 The Paf1 Complex Represses SER3 Transcription in Saccharomyces Cerevisiae by Facilitating Intergenic Transcription-dependent Nucleosome Occupancy of the SER3 Promoter Eukaryotic Cell. Oct, 2011 | Pubmed ID: 21873510 Transcription of NcDNA: Many Roads Lead to Local Gene Regulation Transcription. May, 2011 | Pubmed ID: 21826282 Identification of Histone Mutants That Are Defective for Transcription-coupled Nucleosome Occupancy Molecular and Cellular Biology. Sep, 2011 | Pubmed ID: 21730290 Intergenic Transcription Causes Repression by Directing Nucleosome Assembly Genes & Development. Jan, 2011 | Pubmed ID: 21156811 Single-Cell Factor Localization on Chromatin using Ultra-Low Input Cleavage Under Targets and Release using Nuclease Santana M. Lardo1, Sarah J. Hainer1 1Department of Biological Sciences, University of Pittsburgh JoVE 63536 Biology
Single-Cell Factor Localization on Chromatin using Ultra-Low Input Cleavage Under Targets and Release using Nuclease Santana M. Lardo1, Sarah J. Hainer1 1Department of Biological Sciences, University of Pittsburgh JoVE 63536 Biology