Shawn M. Burgess

Publications

• Transcriptional Signature of Accessory Cells in the Lateral Line, Using the Tnk1bp1:EGFP Transgenic Zebrafish Line
  BMC Developmental Biology. Jan, 2012  |   Pubmed ID: 22273551
• Yeast-based Assay Identifies Novel Shh/Gli Target Genes in Vertebrate Development
  BMC Genomics. Jan, 2012  |   Pubmed ID: 22214306
• Using a Yeast Inverse One-hybrid System to Identify Functional Binding Sites of Transcription Factors
  Methods in Molecular Biology (Clifton, N.J.). 2012  |   Pubmed ID: 21938633
• Sequencing-based Expression Profiling in Zebrafish
  Methods in Cell Biology. 2011  |   Pubmed ID: 21924174
• Molecular Dissection of the Migrating Posterior Lateral Line Primordium During Early Development in Zebrafish
  BMC Developmental Biology. 2010  |   Pubmed ID: 21144052
• Phoenix is Required for Mechanosensory Hair Cell Regeneration in the Zebrafish Lateral Line
  PLoS Genetics. Apr, 2009  |   Pubmed ID: 19381250
• Production of Pseudotyped Retrovirus and the Generation of Proviral Transgenic Zebrafish
  Methods in Molecular Biology (Clifton, N.J.). 2009  |   Pubmed ID: 19378095
• Using Retroviruses As a Mutagenesis Tool to Explore the Zebrafish Genome
  Briefings in Functional Genomics & Proteomics. Nov, 2008  |   Pubmed ID: 18977782
• Genome Wide Screens in Yeast to Identify Potential Binding Sites and Target Genes of DNA-binding Proteins
  Nucleic Acids Research. Jan, 2008  |   Pubmed ID: 18086703
• Expression Profiling Identifies Novel Hh/Gli-regulated Genes in Developing Zebrafish Embryos
  Genomics. Feb, 2008  |   Pubmed ID: 18055165
• Species-specific Endogenous Retroviruses Shape the Transcriptional Network of the Human Tumor Suppressor Protein P53
  Proceedings of the National Academy of Sciences of the United States of America. Nov, 2007  |   Pubmed ID: 18003932
• Efficient Genome-wide Mutagenesis of Zebrafish Genes by Retroviral Insertions
  Proceedings of the National Academy of Sciences of the United States of America. Jul, 2007  |   Pubmed ID: 17640903
• The Tip-link Antigen, a Protein Associated with the Transduction Complex of Sensory Hair Cells, is Protocadherin-15
  The Journal of Neuroscience : the Official Journal of the Society for Neuroscience. Jun, 2006  |   Pubmed ID: 16807332
• The Forkhead Transcription Factor FoxI1 Remains Bound to Condensed Mitotic Chromosomes and Stably Remodels Chromatin Structure
  Molecular and Cellular Biology. Jan, 2006  |   Pubmed ID: 16354687
• Redefining the Common Insertion Site
  Virology. Jan, 2006  |   Pubmed ID: 16271739
• The Zebrafish Gene Claudinj is Essential for Normal Ear Function and Important for the Formation of the Otoliths
  Mechanisms of Development. Jul, 2005  |   Pubmed ID: 15925497
• Weak Palindromic Consensus Sequences Are a Common Feature Found at the Integration Target Sites of Many Retroviruses
  Journal of Virology. Apr, 2005  |   Pubmed ID: 15795304
• High-resolution Genome-wide Mapping of Transposon Integration in Mammals
  Molecular and Cellular Biology. Mar, 2005  |   Pubmed ID: 15743807
• Large-scale Molecular Characterization of Adeno-associated Virus Vector Integration in Mouse Liver
  Journal of Virology. Mar, 2005  |   Pubmed ID: 15731255
• Oculofaciocardiodental and Lenz Microphthalmia Syndromes Result from Distinct Classes of Mutations in BCOR
  Nature Genetics. Apr, 2004  |   Pubmed ID: 15004558
• Mmm2p, a Mitochondrial Outer Membrane Protein Required for Yeast Mitochondrial Shape and Maintenance of MtDNA Nucleoids
  The Journal of Cell Biology. Mar, 2004  |   Pubmed ID: 14981098
• Transgenic Zebrafish Produced by Retroviral Infection of in Vitro-cultured Sperm
  Proceedings of the National Academy of Sciences of the United States of America. Feb, 2004  |   Pubmed ID: 14745028
• Transcription Start Regions in the Human Genome Are Favored Targets for MLV Integration
  Science (New York, N.Y.). Jun, 2003  |   Pubmed ID: 12805549
• Zebrafish Foxi One Modulates Cellular Responses to Fgf Signaling Required for the Integrity of Ear and Jaw Patterning
  Development (Cambridge, England). Jun, 2003  |   Pubmed ID: 12702667