Sheng Zhong Department of Bioengineering University of California San Diego Biography Publications Institution JoVE Articles Sheng Zhong has not added a biography. If you are Sheng Zhong and would like to personalize this page please email our Author Liaison for assistance. Publications Extracellular RNA in a Single Droplet of Human Serum Reflects Physiologic and Disease States Proceedings of the National Academy of Sciences of the United States of America. 09, 2019 | Pubmed ID: 31481608 EpiAlignment: Alignment with Both DNA Sequence and Epigenomic Data Nucleic Acids Research. 07, 2019 | Pubmed ID: 31114924 A Likelihood Approach to Testing Hypotheses on the Co-evolution of Epigenome and Genome PLoS Computational Biology. 12, 2018 | Pubmed ID: 30586383 GITAR: An Open Source Tool for Analysis and Visualization of Hi-C Data Genomics, Proteomics & Bioinformatics. 10, 2018 | Pubmed ID: 30553884 RNAs As Proximity-Labeling Media for Identifying Nuclear Speckle Positions Relative to the Genome IScience. Jun, 2018 | Pubmed ID: 30240742 RNA, Action Through Interactions Trends in Genetics : TIG. 11, 2018 | Pubmed ID: 30177410 GIVE: Portable Genome Browsers for Personal Websites Genome Biology. 07, 2018 | Pubmed ID: 30016975 Trends in Cannabis Use Disorder Among Pregnant Women in the U.S., 1993-2014 Journal of General Internal Medicine. 03, 2018 | Pubmed ID: 29030807 The 4D Nucleome Project Nature. 09, 2017 | Pubmed ID: 28905911 SMARCAD1 Contributes to the Regulation of Naive Pluripotency by Interacting with Histone Citrullination Cell Reports. Mar, 2017 | Pubmed ID: 28355564 Transcriptomic Insights into the Genetic Basis of Mammalian Limb Diversity BMC Evolutionary Biology. Mar, 2017 | Pubmed ID: 28335721 GeNemo: a Search Engine for Web-based Functional Genomic Data Nucleic Acids Research. Jul, 2016 | Pubmed ID: 27098038 P16INK4a Upregulation Mediated by SIX6 Defines Retinal Ganglion Cell Pathogenesis in Glaucoma Molecular Cell. Sep, 2015 | Pubmed ID: 26365380 Cell Fate Inclination Within 2-cell and 4-cell Mouse Embryos Revealed by Single-cell RNA Sequencing Genome Research. Nov, 2014 | Pubmed ID: 25096407 Comparative Epigenomics: Defining and Utilizing Epigenomic Variations Across Species, Time-course, and Individuals Wiley Interdisciplinary Reviews. Systems Biology and Medicine. Sep-Oct, 2014 | Pubmed ID: 25044241 From Genomes to Societies: a Holistic View of Determinants of Human Health Current Opinion in Biotechnology. Aug, 2014 | Pubmed ID: 24686286 Understanding Variation in Transcription Factor Binding by Modeling Transcription Factor Genome-epigenome Interactions PLoS Computational Biology. 2013 | Pubmed ID: 24339764 Enabling Interspecies Epigenomic Comparison with CEpBrowser Bioinformatics (Oxford, England). May, 2013 | Pubmed ID: 23543396 Stress-induced RNA-chromatin Interactions Promote Endothelial Dysfunction Nature Communications. | Pubmed ID: 33060583 Natural Display of Nuclear-encoded RNA on the Cell Surface and Its Impact on Cell Interaction Genome Biology. | Pubmed ID: 32907628 Reply to Verwilt Et Al.: Experimental Evidence Against DNA Contamination in SILVER-seq Proceedings of the National Academy of Sciences of the United States of America. | Pubmed ID: 32788395 Reply to Hartl and Gao: Lack of Between-batch Difference in the Distributions of Measured Extracellular RNA Levels Proceedings of the National Academy of Sciences of the United States of America. | Pubmed ID: 31964851 Rainbow-Seq: Combining Cell Lineage Tracing with Single-Cell RNA Sequencing in Preimplantation Embryos IScience. | Pubmed ID: 30267678 Isolation and Profiling of Human Primary Mesenteric Arterial Endothelial Cells at the Transcriptome Level Naseeb Kaur Malhi*1, Yingjun Luo*1, Xiaofang Tang*1, Kiran Sriram1,3, Riccardo Calandrelli2, Sheng Zhong2, Zhen Bouman Chen1,3 1Department of Diabetes Complications and Metabolism, City of Hope, 2Department of Bioengineering, University of California San Diego, 3Irell and Manella Graduate School of Biological Sciences, City of Hope JoVE 63307 Medicine Pattern-based Search of Epigenomic Data Using GeNemo Alvin Zheng*1, Xiaoyi Cao*1, Sheng Zhong1 1Department of Bioengineering, University of California San Diego JoVE 56136 Bioengineering
Isolation and Profiling of Human Primary Mesenteric Arterial Endothelial Cells at the Transcriptome Level Naseeb Kaur Malhi*1, Yingjun Luo*1, Xiaofang Tang*1, Kiran Sriram1,3, Riccardo Calandrelli2, Sheng Zhong2, Zhen Bouman Chen1,3 1Department of Diabetes Complications and Metabolism, City of Hope, 2Department of Bioengineering, University of California San Diego, 3Irell and Manella Graduate School of Biological Sciences, City of Hope JoVE 63307 Medicine
Pattern-based Search of Epigenomic Data Using GeNemo Alvin Zheng*1, Xiaoyi Cao*1, Sheng Zhong1 1Department of Bioengineering, University of California San Diego JoVE 56136 Bioengineering
