Publications

• TCP4-dependent Induction of CONSTANS Transcription Requires GIGANTEA in Photoperiodic Flowering in Arabidopsis
  PLoS Genetics. Jun, 2017  |   Pubmed ID: 28628608
• Plant Stress Tolerance Requires Auxin-Sensitive Aux/IAA Transcriptional Repressors
  Current Biology : CB. Feb, 2017  |   Pubmed ID: 28111153
• Comparative Analysis of Vertebrate Diurnal/Circadian Transcriptomes
  PloS One. 2017  |   Pubmed ID: 28076377
• Arabidopsis B-BOX32 Interacts with CONSTANS-LIKE3 to Regulate Flowering
  Proceedings of the National Academy of Sciences of the United States of America. Jan, 2017  |   Pubmed ID: 27999181
• Molecular Mechanisms at the Core of the Plant Circadian Oscillator
  Nature Structural & Molecular Biology. Dec, 2016  |   Pubmed ID: 27922614
• The Plant Circadian Clock: From a Simple Timekeeper to a Complex Developmental Manager
  Cold Spring Harbor Perspectives in Biology. Dec, 2016  |   Pubmed ID: 27663772
• Circadian Amplitude Regulation Via FBXW7-Targeted REV-ERBα Degradation
  Cell. Jun, 2016  |   Pubmed ID: 27238018
• The Rqc2/Tae2 Subunit of the Ribosome-associated Quality Control (RQC) Complex Marks Ribosome-stalled Nascent Polypeptide Chains for Aggregation
  ELife. Mar, 2016  |   Pubmed ID: 26943317
• Identification of Arabidopsis Transcriptional Regulators by Yeast One-Hybrid Screens Using a Transcription Factor ORFeome
  Methods in Molecular Biology (Clifton, N.J.). 2016  |   Pubmed ID: 26867619
• Cultivated Tomato Clock Runs Slow
  Nature Genetics. Jan, 2016  |   Pubmed ID: 26711110
• Identification of Evening Complex Associated Proteins in Arabidopsis by Affinity Purification and Mass Spectrometry
  Molecular & Cellular Proteomics : MCP. Jan, 2016  |   Pubmed ID: 26545401
• Integration of Light and Photoperiodic Signaling in Transcriptional Nuclear Foci
  Developmental Cell. Nov, 2015  |   Pubmed ID: 26555051
• Genome-wide Identification of CCA1 Targets Uncovers an Expanded Clock Network in Arabidopsis
  Proceedings of the National Academy of Sciences of the United States of America. Aug, 2015  |   Pubmed ID: 26261339
• Identification of Open Stomata1-Interacting Proteins Reveals Interactions with Sucrose Non-fermenting1-Related Protein Kinases2 and with Type 2A Protein Phosphatases That Function in Abscisic Acid Responses
  Plant Physiology. Sep, 2015  |   Pubmed ID: 26175513
• Development of Small-Molecule Cryptochrome Stabilizer Derivatives As Modulators of the Circadian Clock
  ChemMedChem. Sep, 2015  |   Pubmed ID: 26174033
• Spatial and Temporal Regulation of Biosynthesis of the Plant Immune Signal Salicylic Acid
  Proceedings of the National Academy of Sciences of the United States of America. Jul, 2015  |   Pubmed ID: 26139525
• C-H Activation Generates Period-shortening Molecules That Target Cryptochrome in the Mammalian Circadian Clock
  Angewandte Chemie (International Ed. in English). Jun, 2015  |   Pubmed ID: 25960183
• Identification of Small-molecule Modulators of the Circadian Clock
  Methods in Enzymology. 2015  |   Pubmed ID: 25662461
• Control of Plant Stem Cell Function by Conserved Interacting Transcriptional Regulators
  Nature. Jan, 2015  |   Pubmed ID: 25363783
• Tissue-specific Clocks in Arabidopsis Show Asymmetric Coupling
  Nature. Nov, 2014  |   Pubmed ID: 25363766
• HsfB2b-mediated Repression of PRR7 Directs Abiotic Stress Responses of the Circadian Clock
  Proceedings of the National Academy of Sciences of the United States of America. Nov, 2014  |   Pubmed ID: 25352668
• Nitrate Foraging by Arabidopsis Roots is Mediated by the Transcription Factor TCP20 Through the Systemic Signaling Pathway
  Proceedings of the National Academy of Sciences of the United States of America. Oct, 2014  |   Pubmed ID: 25288754
• FBH1 Affects Warm Temperature Responses in the Arabidopsis Circadian Clock
  Proceedings of the National Academy of Sciences of the United States of America. Oct, 2014  |   Pubmed ID: 25246594
• A Genome-scale Resource for the Functional Characterization of Arabidopsis Transcription Factors
  Cell Reports. Jul, 2014  |   Pubmed ID: 25043187
• Transcriptional Regulation of LUX by CBF1 Mediates Cold Input to the Circadian Clock in Arabidopsis
  Current Biology : CB. Jul, 2014  |   Pubmed ID: 24954045
• Daily Changes in Temperature, Not the Circadian Clock, Regulate Growth Rate in Brachypodium Distachyon
  PloS One. 2014  |   Pubmed ID: 24927130
• Spatiotemporal Separation of PER and CRY Posttranslational Regulation in the Mammalian Circadian Clock
  Proceedings of the National Academy of Sciences of the United States of America. Feb, 2014  |   Pubmed ID: 24449901
• Real-time in Vivo Monitoring of Circadian E-box Enhancer Activity: a Robust and Sensitive Zebrafish Reporter Line for Developmental, Chemical and Neural Biology of the Circadian Clock
  Developmental Biology. Aug, 2013  |   Pubmed ID: 23665472
• BRANCHED1 Interacts with FLOWERING LOCUS T to Repress the Floral Transition of the Axillary Meristems in Arabidopsis
  The Plant Cell. Apr, 2013  |   Pubmed ID: 23613197
• Global Approaches for Telling Time: Omics and the Arabidopsis Circadian Clock
  Seminars in Cell & Developmental Biology. May, 2013  |   Pubmed ID: 23435351
• Circadian Surprise--it's Not All About Transcription
  Science (New York, N.Y.). Oct, 2012  |   Pubmed ID: 23087238
• CIRCADIAN CLOCK-ASSOCIATED 1 Regulates ROS Homeostasis and Oxidative Stress Responses
  Proceedings of the National Academy of Sciences of the United States of America. Oct, 2012  |   Pubmed ID: 23027948
• Complexity in the Wiring and Regulation of Plant Circadian Networks
  Current Biology : CB. Aug, 2012  |   Pubmed ID: 22917516
• Identification of Small Molecule Activators of Cryptochrome
  Science (New York, N.Y.). Aug, 2012  |   Pubmed ID: 22798407
• [Circadian Clocks and Photoperiodism]
  Fukuoka Igaku Zasshi = Hukuoka Acta Medica. Feb, 2012  |   Pubmed ID: 22568125
• Linking Photoreceptor Excitation to Changes in Plant Architecture
  Genes & Development. Apr, 2012  |   Pubmed ID: 22508725
• Arabidopsis Circadian Clock Protein, TOC1, is a DNA-binding Transcription Factor
  Proceedings of the National Academy of Sciences of the United States of America. Feb, 2012  |   Pubmed ID: 22315425
• ELF3 Recruitment to the PRR9 Promoter Requires Other Evening Complex Members in the Arabidopsis Circadian Clock
  Plant Signaling & Behavior. Feb, 2012  |   Pubmed ID: 22307044
• Gene Transfer in Leptolyngbya Sp. Strain BL0902, a Cyanobacterium Suitable for Production of Biomass and Bioproducts
  PloS One. 2012  |   Pubmed ID: 22292073
• Cell-autonomous Hepatic Circadian Clock Regulates Polyamine Synthesis
  Cell Cycle (Georgetown, Tex.). Feb, 2012  |   Pubmed ID: 22262187
• Cell-autonomous Circadian Clock of Hepatocytes Drives Rhythms in Transcription and Polyamine Synthesis
  Proceedings of the National Academy of Sciences of the United States of America. Nov, 2011  |   Pubmed ID: 22042857
• Enhanced Y1H Assays for Arabidopsis
  Nature Methods. Oct, 2011  |   Pubmed ID: 22037706
• A Small Molecule Modulates Circadian Rhythms Through Phosphorylation of the Period Protein
  Angewandte Chemie (International Ed. in English). Nov, 2011  |   Pubmed ID: 21954091
• The ELF4-ELF3-LUX Complex Links the Circadian Clock to Diurnal Control of Hypocotyl Growth
  Nature. Jul, 2011  |   Pubmed ID: 21753751
• GIGANTEA Directly Activates Flowering Locus T in Arabidopsis Thaliana
  Proceedings of the National Academy of Sciences of the United States of America. Jul, 2011  |   Pubmed ID: 21709243
• Global Profiling of Rice and Poplar Transcriptomes Highlights Key Conserved Circadian-controlled Pathways and Cis-regulatory Modules
  PloS One. 2011  |   Pubmed ID: 21694767
• Automated Analysis of Hypocotyl Growth Dynamics During Shade Avoidance in Arabidopsis
  The Plant Journal : for Cell and Molecular Biology. Mar, 2011  |   Pubmed ID: 21288269
• LUX ARRHYTHMO Encodes a Nighttime Repressor of Circadian Gene Expression in the Arabidopsis Core Clock
  Current Biology : CB. Jan, 2011  |   Pubmed ID: 21236673
• High-throughput Chemical Screen Identifies a Novel Potent Modulator of Cellular Circadian Rhythms and Reveals CKIα As a Clock Regulatory Kinase
  PLoS Biology. Dec, 2010  |   Pubmed ID: 21179498
• Emergence of Noise-induced Oscillations in the Central Circadian Pacemaker
  PLoS Biology. 2010  |   Pubmed ID: 20967239
• Clocks Not Winding Down: Unravelling Circadian Networks
  Nature Reviews. Molecular Cell Biology. Nov, 2010  |   Pubmed ID: 20966970
• Cryptochrome Mediates Circadian Regulation of CAMP Signaling and Hepatic Gluconeogenesis
  Nature Medicine. Oct, 2010  |   Pubmed ID: 20852621
• Circadian Control of Global Gene Expression Patterns
  Annual Review of Genetics. 2010  |   Pubmed ID: 20809800
• An Expanding Universe of Circadian Networks in Higher Plants
  Trends in Plant Science. May, 2010  |   Pubmed ID: 20382065
• F-box Proteins FKF1 and LKP2 Act in Concert with ZEITLUPE to Control Arabidopsis Clock Progression
  The Plant Cell. Mar, 2010  |   Pubmed ID: 20354196
• Suprachiasmatic Nucleus: Cell Autonomy and Network Properties
  Annual Review of Physiology. 2010  |   Pubmed ID: 20148688
• High-throughput Screening and Chemical Biology: New Approaches for Understanding Circadian Clock Mechanisms
  Chemistry & Biology. Sep, 2009  |   Pubmed ID: 19778719
• A Genome-wide RNAi Screen for Modifiers of the Circadian Clock in Human Cells
  Cell. Oct, 2009  |   Pubmed ID: 19765810
• A Model of the Cell-autonomous Mammalian Circadian Clock
  Proceedings of the National Academy of Sciences of the United States of America. Jul, 2009  |   Pubmed ID: 19549830
• HSP90, a Capacitor of Behavioral Variation
  Journal of Biological Rhythms. Jun, 2009  |   Pubmed ID: 19465695
• Cytochrome P450 Monooxygenases As Reporters for Circadian-regulated Pathways
  Plant Physiology. Jun, 2009  |   Pubmed ID: 19386812
• A Functional Genomics Approach Reveals CHE As a Component of the Arabidopsis Circadian Clock
  Science (New York, N.Y.). Mar, 2009  |   Pubmed ID: 19286557
• Exploring the Transcriptional Landscape of Plant Circadian Rhythms Using Genome Tiling Arrays
  Genome Biology. Feb, 2009  |   Pubmed ID: 19210792
• A Mouse Forward Genetics Screen Identifies LISTERIN As an E3 Ubiquitin Ligase Involved in Neurodegeneration
  Proceedings of the National Academy of Sciences of the United States of America. Feb, 2009  |   Pubmed ID: 19196968
• Photoperiodic Flowering Occurs Under Internal and External Coincidence
  Plant Signaling & Behavior. Apr, 2008  |   Pubmed ID: 19704651
• A Chemical Biology Approach Reveals Period Shortening of the Mammalian Circadian Clock by Specific Inhibition of GSK-3beta
  Proceedings of the National Academy of Sciences of the United States of America. Dec, 2008  |   Pubmed ID: 19104043
• SnapShot: Circadian Clock Proteins
  Cell. Oct, 2008  |   Pubmed ID: 18957209
• A Morning-specific Phytohormone Gene Expression Program Underlying Rhythmic Plant Growth
  PLoS Biology. Sep, 2008  |   Pubmed ID: 18798691
• Global Transcriptome Analysis Reveals Circadian Regulation of Key Pathways in Plant Growth and Development
  Genome Biology. 2008  |   Pubmed ID: 18710561
• Redundant Function of REV-ERBalpha and Beta and Non-essential Role for Bmal1 Cycling in Transcriptional Regulation of Intracellular Circadian Rhythms
  PLoS Genetics. Feb, 2008  |   Pubmed ID: 18454201
• [Molecular Mechanism by Which Plant Determines Flowering Timing with Circadian Clock]
  Tanpakushitsu Kakusan Koso. Protein, Nucleic Acid, Enzyme. May, 2008  |   Pubmed ID: 18453150
• Network Discovery Pipeline Elucidates Conserved Time-of-day-specific Cis-regulatory Modules
  PLoS Genetics. Feb, 2008  |   Pubmed ID: 18248097
• PRR3 Is a Vascular Regulator of TOC1 Stability in the Arabidopsis Circadian Clock
  The Plant Cell. Nov, 2007  |   Pubmed ID: 18055606
• Circadian Rhythms. Daily Watch on Metabolism
  Science (New York, N.Y.). Dec, 2007  |   Pubmed ID: 18006706
• PRR7 Protein Levels Are Regulated by Light and the Circadian Clock in Arabidopsis
  The Plant Journal : for Cell and Molecular Biology. Nov, 2007  |   Pubmed ID: 17877705
• Mammalian Circadian Signaling Networks and Therapeutic Targets
  Nature Chemical Biology. Oct, 2007  |   Pubmed ID: 17876320
• FKF1 and GIGANTEA Complex Formation is Required for Day-length Measurement in Arabidopsis
  Science (New York, N.Y.). Oct, 2007  |   Pubmed ID: 17872410
• Plant Biology: Time for Growth
  Nature. Jul, 2007  |   Pubmed ID: 17637650
• Circadian Transcription Depends on Limiting Amounts of the Transcription Co-activator Nejire/CBP
  The Journal of Biological Chemistry. Oct, 2007  |   Pubmed ID: 17635913
• Genome-wide Patterns of Single-feature Polymorphism in Arabidopsis Thaliana
  Proceedings of the National Academy of Sciences of the United States of America. Jul, 2007  |   Pubmed ID: 17626786
• In SYNC: the Ins and Outs of Circadian Oscillations in Calcium
  Science's STKE : Signal Transduction Knowledge Environment. Jun, 2007  |   Pubmed ID: 17565121
• Intercellular Coupling Confers Robustness Against Mutations in the SCN Circadian Clock Network
  Cell. May, 2007  |   Pubmed ID: 17482552
• Impaired Clock Output by Altered Connectivity in the Circadian Network
  Proceedings of the National Academy of Sciences of the United States of America. Mar, 2007  |   Pubmed ID: 17369364
• A Constitutive Shade-avoidance Mutant Implicates TIR-NBS-LRR Proteins in Arabidopsis Photomorphogenic Development
  The Plant Cell. Nov, 2006  |   Pubmed ID: 17114357
• A Novel Computational Model of the Circadian Clock in Arabidopsis That Incorporates PRR7 and PRR9
  Molecular Systems Biology. 2006  |   Pubmed ID: 17102803
• Photoperiodic Control of Flowering: Not Only by Coincidence
  Trends in Plant Science. Nov, 2006  |   Pubmed ID: 17035069
• Arabidopsis FHY3 Specifically Gates Phytochrome Signaling to the Circadian Clock
  The Plant Cell. Oct, 2006  |   Pubmed ID: 17012604
• Second Messenger and Ras/MAPK Signalling Pathways Regulate CLOCK/CYCLE-dependent Transcription
  Journal of Neurochemistry. Jul, 2006  |   Pubmed ID: 16805811
• Circadian Rhythms Lit Up in Chlamydomonas
  Genome Biology. 2006  |   Pubmed ID: 16677428
• Feedback Repression is Required for Mammalian Circadian Clock Function
  Nature Genetics. Mar, 2006  |   Pubmed ID: 16474406
• LUX ARRHYTHMO Encodes a Myb Domain Protein Essential for Circadian Rhythms
  Proceedings of the National Academy of Sciences of the United States of America. Jul, 2005  |   Pubmed ID: 16006522
• FKF1 F-box Protein Mediates Cyclic Degradation of a Repressor of CONSTANS in Arabidopsis
  Science (New York, N.Y.). Jul, 2005  |   Pubmed ID: 16002617
• Positive and Negative Factors Confer Phase-specific Circadian Regulation of Transcription in Arabidopsis
  The Plant Cell. Jul, 2005  |   Pubmed ID: 15923346
• Rapid Array Mapping of Circadian Clock and Developmental Mutations in Arabidopsis
  Plant Physiology. Jun, 2005  |   Pubmed ID: 15908595
• Real-time Reporting of Circadian-regulated Gene Expression by Luciferase Imaging in Plants and Mammalian Cells
  Methods in Enzymology. 2005  |   Pubmed ID: 15817294
• Bioluminescence Imaging in Living Organisms
  Current Opinion in Biotechnology. Feb, 2005  |   Pubmed ID: 15722018
• Overlapping and Distinct Roles of PRR7 and PRR9 in the Arabidopsis Circadian Clock
  Current Biology : CB. Jan, 2005  |   Pubmed ID: 15649364
• Bioluminescence Imaging of Individual Fibroblasts Reveals Persistent, Independently Phased Circadian Rhythms of Clock Gene Expression
  Current Biology : CB. Dec, 2004  |   Pubmed ID: 15620658
• A Functional Genomics Strategy Reveals Rora As a Component of the Mammalian Circadian Clock
  Neuron. Aug, 2004  |   Pubmed ID: 15312651
• Universality and Flexibility in Gene Expression from Bacteria to Human
  Proceedings of the National Academy of Sciences of the United States of America. Mar, 2004  |   Pubmed ID: 14999098
• Circadian Light Input in Plants, Flies and Mammals
  Novartis Foundation Symposium. 2003  |   Pubmed ID: 14712915
• Targeted Degradation of TOC1 by ZTL Modulates Circadian Function in Arabidopsis Thaliana
  Nature. Dec, 2003  |   Pubmed ID: 14654842
• The F Box Protein AFR is a Positive Regulator of Phytochrome A-mediated Light Signaling
  Current Biology : CB. Dec, 2003  |   Pubmed ID: 14653999
• A Genomic Analysis of the Shade Avoidance Response in Arabidopsis
  Plant Physiology. Dec, 2003  |   Pubmed ID: 14645734
• A PERIOD Inhibitor Buffer Introduces a Delay Mechanism for CLK/CYC-activated Transcription
  FEBS Letters. Dec, 2003  |   Pubmed ID: 14644439
• FKF1 is Essential for Photoperiodic-specific Light Signalling in Arabidopsis
  Nature. Nov, 2003  |   Pubmed ID: 14628054
• HY5, Circadian Clock-Associated 1, and a Cis-element, DET1 Dark Response Element, Mediate DET1 Regulation of Chlorophyll A/b-binding Protein 2 Expression
  Plant Physiology. Dec, 2003  |   Pubmed ID: 14563928
• Gene Arrays Are Not Just for Measuring Gene Expression
  Trends in Plant Science. Sep, 2003  |   Pubmed ID: 13678907
• Circadian Clocks in Daily and Seasonal Control of Development
  Science (New York, N.Y.). Jul, 2003  |   Pubmed ID: 12869749
• Melanopsin is Required for Non-image-forming Photic Responses in Blind Mice
  Science (New York, N.Y.). Jul, 2003  |   Pubmed ID: 12829787
• DNA Arrays: Applications and Implications for Circadian Biology
  Journal of Biological Rhythms. Apr, 2003  |   Pubmed ID: 12693865
• Living by the Calendar: How Plants Know when to Flower
  Nature Reviews. Molecular Cell Biology. Apr, 2003  |   Pubmed ID: 12671649
• Genome-wide Single-nucleotide Polymorphism Analysis Defines Haplotype Patterns in Mouse
  Proceedings of the National Academy of Sciences of the United States of America. Mar, 2003  |   Pubmed ID: 12612341
• Dual Role of TOC1 in the Control of Circadian and Photomorphogenic Responses in Arabidopsis
  The Plant Cell. Jan, 2003  |   Pubmed ID: 12509533
• Melanopsin (Opn4) Requirement for Normal Light-induced Circadian Phase Shifting
  Science (New York, N.Y.). Dec, 2002  |   Pubmed ID: 12481141
• Divergent Perspectives on GM Food
  Nature Biotechnology. Dec, 2002  |   Pubmed ID: 12454665
• Genome-wide Expression Analysis in Drosophila Reveals Genes Controlling Circadian Behavior
  The Journal of Neuroscience : the Official Journal of the Society for Neuroscience. Nov, 2002  |   Pubmed ID: 12417656
• Molecular Basis of Seasonal Time Measurement in Arabidopsis
  Nature. Sep, 2002  |   Pubmed ID: 12239570
• Tej Defines a Role for Poly(ADP-ribosyl)ation in Establishing Period Length of the Arabidopsis Circadian Oscillator
  Developmental Cell. Jul, 2002  |   Pubmed ID: 12110167
• Coordinated Transcription of Key Pathways in the Mouse by the Circadian Clock
  Cell. May, 2002  |   Pubmed ID: 12015981
• Circadian Rhythms from Flies to Human
  Nature. May, 2002  |   Pubmed ID: 12015613
• Critical Role for CCA1 and LHY in Maintaining Circadian Rhythmicity in Arabidopsis
  Current Biology : CB. Apr, 2002  |   Pubmed ID: 12007421
• A P Element with a Novel Fusion of Reporters Identifies Regular, a C2H2 Zinc-finger Gene Downstream of the Circadian Clock
  Molecular and Cellular Neurosciences. Apr, 2002  |   Pubmed ID: 11988018