Susan Clark

Publications

• A Basal Gradient of Wnt and Stem-cell Number Influences Regional Tumour Distribution in Human and Mouse Intestinal Tracts
  Gut. Jan, 2012  |   Pubmed ID: 22287596
• Prognostic and Diagnostic Significance of DNA Methylation Patterns in High Grade Serous Ovarian Cancer
  Gynecologic Oncology. Mar, 2012  |   Pubmed ID: 22115852
• Acetylation of H2A.Z is a Key Epigenetic Modification Associated with Gene Deregulation and Epigenetic Remodeling in Cancer
  Genome Research. Feb, 2012  |   Pubmed ID: 21788347
• Integrative Genome-wide Expression and Promoter DNA Methylation Profiling Identifies a Potential Novel Panel of Ovarian Cancer Epigenetic Biomarkers
  Cancer Letters. Dec, 2011  |   Pubmed ID: 22155104
• MicroRNA Alterations and Associated Aberrant DNA Methylation Patterns Across Multiple Sample Types in Oral Squamous Cell Carcinoma
  PloS One. 2011  |   Pubmed ID: 22132151
• The Development of a Social Morbidity Score in Patients with Chronic Ulcerative Colitis As a Potential Guide to Treatment
  Colorectal Disease : the Official Journal of the Association of Coloproctology of Great Britain and Ireland. Nov, 2011  |   Pubmed ID: 22053990
• Impact of the Genome on the Epigenome is Manifested in DNA Methylation Patterns of Imprinted Regions in Monozygotic and Dizygotic Twins
  PloS One. 2011  |   Pubmed ID: 21991322
• Human Gut-specific Homeostatic Dendritic Cells Are Generated from Blood Precursors by the Gut Microenvironment
  Inflammatory Bowel Diseases. Oct, 2011  |   Pubmed ID: 21987473
• MiRNA-dependent Gene Silencing Involving Ago2-mediated Cleavage of a Circular Antisense RNA
  The EMBO Journal. Nov, 2011  |   Pubmed ID: 21964070
• Key Challenges in Simulated Patient Programs: an International Comparative Case Study
  BMC Medical Education. 2011  |   Pubmed ID: 21943295
• Nurse Practitioner Management of Chronic Musculoskeletal Pain: a Chart Review
  The Nurse Practitioner. Sep, 2011  |   Pubmed ID: 21857215
• Dynamics of Bivalent Chromatin Domains Upon Drug Induced Reactivation and Resilencing in Cancer Cells
  Epigenetics : Official Journal of the DNA Methylation Society. Sep, 2011  |   Pubmed ID: 21852760
• Lineage Specific Methylation of the Elf5 Promoter in Mammary Epithelial Cells
  Stem Cells (Dayton, Ohio). Oct, 2011  |   Pubmed ID: 21823211
• Epigenetics in Prostate Cancer: Biologic and Clinical Relevance
  European Urology. Oct, 2011  |   Pubmed ID: 21719191
• Optimization and Validation of a Multiclass Screening and Confirmation Method for Drug Residues in Milk Using High-performance Liquid Chromatography/tandem Mass Spectrometry
  Journal of AOAC International. Mar-Apr, 2011  |   Pubmed ID: 21563671
• College and University Environmental Programs As a Policy Problem (part 1): Integrating Knowledge, Education, and Action for a Better World?
  Environmental Management. May, 2011  |   Pubmed ID: 21359525
• College and University Environmental Programs As a Policy Problem (part 2): Strategies for Improvement
  Environmental Management. May, 2011  |   Pubmed ID: 21359524
• CD154-CD40 Interactions in the Control of Murine B Cell Hematopoiesis
  Journal of Leukocyte Biology. May, 2011  |   Pubmed ID: 21330346
• Analysis of Veterinary Drugs and Metabolites in Milk Using Quadrupole Time-of-flight Liquid Chromatography-mass Spectrometry
  Journal of Agricultural and Food Chemistry. Jul, 2011  |   Pubmed ID: 21284383
• Discovery Pipeline for Epigenetically Deregulated MiRNAs in Cancer: Integration of Primary MiRNA Transcription
  BMC Genomics. 2011  |   Pubmed ID: 21255435
• Mucosectomy with Handsewn Anastomosis Reduces the Risk of Adenoma Formation in the Anorectal Segment After Restorative Proctocolectomy for Familial Adenomatous Polyposis
  Annals of Surgery. Feb, 2011  |   Pubmed ID: 21173697
• Epigenetic Deregulation Across Chromosome 2q14.2 Differentiates Normal from Prostate Cancer and Provides a Regional Panel of Novel DNA Methylation Cancer Biomarkers
  Cancer Epidemiology, Biomarkers & Prevention : a Publication of the American Association for Cancer Research, Cosponsored by the American Society of Preventive Oncology. Jan, 2011  |   Pubmed ID: 21098650
• Colorectal Cancer: No Longer the Issue in Familial Adenomatous Polyposis?
  Familial Cancer. Mar, 2011  |   Pubmed ID: 21052851
• Comparison of Methyl-DNA Immunoprecipitation (MeDIP) and Methyl-CpG Binding Domain (MBD) Protein Capture for Genome-wide DNA Methylation Analysis Reveal CpG Sequence Coverage Bias
  Epigenetics : Official Journal of the DNA Methylation Society. Jan, 2011  |   Pubmed ID: 20818161
• Coordinated Epigenetic Repression of the MiR-200 Family and MiR-205 in Invasive Bladder Cancer
  International Journal of Cancer. Journal International Du Cancer. Mar, 2011  |   Pubmed ID: 20473948
• Epigenetic Architecture and MiRNA: Reciprocal Regulators
  Epigenomics. Dec, 2010  |   Pubmed ID: 22122085
• Protocol Matters: Which Methylome Are You Actually Studying?
  Epigenomics. Aug, 2010  |   Pubmed ID: 21566704
• Evaluation of Affinity-based Genome-wide DNA Methylation Data: Effects of CpG Density, Amplification Bias, and Copy Number Variation
  Genome Research. Dec, 2010  |   Pubmed ID: 21045081
• Severe Polyposis in Apc(1322T) Mice is Associated with Submaximal Wnt Signalling and Increased Expression of the Stem Cell Marker Lgr5
  Gut. Dec, 2010  |   Pubmed ID: 20926645
• Prognostic Significance of Myocardial Fibrosis in Hypertrophic Cardiomyopathy
  Journal of the American College of Cardiology. Sep, 2010  |   Pubmed ID: 20688032
• Defining Responsibilities of Simulated Patients in Medical Education
  Simulation in Healthcare : Journal of the Society for Simulation in Healthcare. Jun, 2010  |   Pubmed ID: 20651478
• A Prospective Study of MR Enterography Versus Capsule Endoscopy for the Surveillance of Adult Patients with Peutz-Jeghers Syndrome
  AJR. American Journal of Roentgenology. Jul, 2010  |   Pubmed ID: 20566803
• The Bacteriology of Pouchitis: a Molecular Phylogenetic Analysis Using 16S RRNA Gene Cloning and Sequencing
  Annals of Surgery. Jul, 2010  |   Pubmed ID: 20562611
• Repitools: an R Package for the Analysis of Enrichment-based Epigenomic Data
  Bioinformatics (Oxford, England). Jul, 2010  |   Pubmed ID: 20457667
• Familial Adenomatous Polyposis (FAP) and Gender. Does Gender Influence the Genetic Transmission of FAP?
  Familial Cancer. Sep, 2010  |   Pubmed ID: 20411341
• Eicosapentaenoic Acid Reduces Rectal Polyp Number and Size in Familial Adenomatous Polyposis
  Gut. Jul, 2010  |   Pubmed ID: 20348368
• A Review of Weight Loss Following Roux-en-Y Gastric Bypass Vs Restrictive Bariatric Surgery: Impact on Adiponectin and Insulin
  Obesity Surgery. May, 2010  |   Pubmed ID: 20177811
• Consolidation of the Cancer Genome into Domains of Repressive Chromatin by Long-range Epigenetic Silencing (LRES) Reduces Transcriptional Plasticity
  Nature Cell Biology. Mar, 2010  |   Pubmed ID: 20173741
• The Role of Pouch Compliance Measurement in the Management of Pouch Dysfunction
  International Journal of Colorectal Disease. Apr, 2010  |   Pubmed ID: 19924421
• Osteoporosis in Patients over 50 Years of Age Following Restorative Proctocolectomy for Ulcerative Colitis: is DXA Screening Warranted?
  Inflammatory Bowel Diseases. Feb, 2010  |   Pubmed ID: 19591132
• Ultrafast Optical Spin Echo for Electron Spins in Semiconductors
  Physical Review Letters. Jun, 2009  |   Pubmed ID: 19659047
• A Mitotic Recombination Map Proximal to the APC Locus on Chromosome 5q and Assessment of Influences on Colorectal Cancer Risk
  BMC Medical Genetics. 2009  |   Pubmed ID: 19515250
• Incidence and Short-term Implications of Prepouch Ileitis Following Restorative Proctocolectomy with Ileal Pouch-anal Anastomosis for Ulcerative Colitis
  Diseases of the Colon and Rectum. May, 2009  |   Pubmed ID: 19502851
• Symptomatic Polyposis in a 4-year-old: the Exception Proves the Rule
  Journal of Paediatrics and Child Health. May, 2009  |   Pubmed ID: 19493128
• Aberrant De Novo Methylation of the P16INK4A CpG Island is Initiated Post Gene Silencing in Association with Chromatin Remodelling and Mimics Nucleosome Positioning
  Human Molecular Genetics. Aug, 2009  |   Pubmed ID: 19477956
• Fecal Coliform Testing to Identify Effective Antibiotic Therapies for Patients with Antibiotic-resistant Pouchitis
  Clinical Gastroenterology and Hepatology : the Official Clinical Practice Journal of the American Gastroenterological Association. May, 2009  |   Pubmed ID: 19418603
• Multiresidue Method for the Triphenylmethane Dyes in Fish: Malachite Green, Crystal (gentian) Violet, and Brilliant Green
  Analytica Chimica Acta. Apr, 2009  |   Pubmed ID: 19286041
• Features of Duodenal Cancer in Patients with Familial Adenomatous Polyposis
  Clinical Gastroenterology and Hepatology : the Official Clinical Practice Journal of the American Gastroenterological Association. Jun, 2009  |   Pubmed ID: 19281862
• Iron Deficiency Anemia: Diagnosis and Management
  Current Opinion in Gastroenterology. Mar, 2009  |   Pubmed ID: 19262200
• Guide to Endoscopy of the Ileo-anal Pouch Following Restorative Proctocolectomy with Ileal Pouch-anal Anastomosis; Indications, Technique, and Management of Common Findings
  Inflammatory Bowel Diseases. Aug, 2009  |   Pubmed ID: 19180580
• Low O6-methylguanine-DNA Methyltransferase (MGMT) Expression and Response to Temozolomide in Aggressive Pituitary Tumours
  Clinical Endocrinology. Aug, 2009  |   Pubmed ID: 19067722
• The Comparative Incidence of Reported Concussions Presenting for Follow-up Management in South African Rugby Union
  Clinical Journal of Sport Medicine : Official Journal of the Canadian Academy of Sport Medicine. Sep, 2008  |   Pubmed ID: 18806547
• Epigenetic and Phenotypic Changes Result from a Continuous Pre and Post Natal Dietary Exposure to Phytoestrogens in an Experimental Population of Mice
  BMC Physiology. 2008  |   Pubmed ID: 18793434
• Putative Direct and Indirect Wnt Targets Identified Through Consistent Gene Expression Changes in APC-mutant Intestinal Adenomas from Humans and Mice
  Human Molecular Genetics. Dec, 2008  |   Pubmed ID: 18782851
• Climate Warming, Marine Protected Areas and the Ocean-scale Integrity of Coral Reef Ecosystems
  PloS One. 2008  |   Pubmed ID: 18728776
• Breast Cancer Epigenetics: Normal Human Mammary Epithelial Cells As a Model System
  Journal of Molecular Medicine (Berlin, Germany). Dec, 2008  |   Pubmed ID: 18716754
• The Risk of Oral Contraceptives in the Etiology of Inflammatory Bowel Disease: a Meta-analysis
  The American Journal of Gastroenterology. Sep, 2008  |   Pubmed ID: 18684177
• Persistent Perineal Sinus After Ileoanal Pouch Excision in Inflammatory Bowel Diseases: Incidence, Risk Factors, and Clinical Course
  Diseases of the Colon and Rectum. Dec, 2008  |   Pubmed ID: 18626712
• Epigenetic Markers of Ovarian Cancer
  Advances in Experimental Medicine and Biology. 2008  |   Pubmed ID: 18546617
• Determination and Confirmation of Melamine Residues in Catfish, Trout, Tilapia, Salmon, and Shrimp by Liquid Chromatography with Tandem Mass Spectrometry
  Journal of Agricultural and Food Chemistry. Jun, 2008  |   Pubmed ID: 18494486
• This is Your Future: a Case Study Approach to Foster Health Literacy
  The Journal of School Health. Jun, 2008  |   Pubmed ID: 18489469
• Iron Deficiency Anemia
  Nutrition in Clinical Practice : Official Publication of the American Society for Parenteral and Enteral Nutrition. Apr-May, 2008  |   Pubmed ID: 18390780
• DNA Methylation Changes in Ovarian Cancer: Implications for Early Diagnosis, Prognosis and Treatment
  Gynecologic Oncology. Apr, 2008  |   Pubmed ID: 18234305
• Perception of Voice in the Transgender Client
  Journal of Voice : Official Journal of the Voice Foundation. Nov, 2008  |   Pubmed ID: 17400427
• Concordant Epigenetic Silencing of Transforming Growth Factor-beta Signaling Pathway Genes Occurs Early in Breast Carcinogenesis
  Cancer Research. Dec, 2007  |   Pubmed ID: 18089780
• Enhancing Health Literacy Through Accessing Health Information, Products, and Services: an Exercise for Children and Adolescents
  The Journal of School Health. Nov, 2007  |   Pubmed ID: 17970869
• Epigenetic Inactivation of a Cluster of Genes Flanking MLH1 in Microsatellite-unstable Colorectal Cancer
  Cancer Research. Oct, 2007  |   Pubmed ID: 17909015
• Genomic Profiling of CpG Methylation and Allelic Specificity Using Quantitative High-throughput Mass Spectrometry: Critical Evaluation and Improvements
  Nucleic Acids Research. 2007  |   Pubmed ID: 17855397
• Quantum Computers Based on Electron Spins Controlled by Ultrafast Off-resonant Single Optical Pulses
  Physical Review Letters. Jul, 2007  |   Pubmed ID: 17678343
• Action at a Distance: Epigenetic Silencing of Large Chromosomal Regions in Carcinogenesis
  Human Molecular Genetics. Apr, 2007  |   Pubmed ID: 17613553
• The Effect of Restorative Proctocolectomy on Sexual Function, Urinary Function, Fertility, Pregnancy and Delivery: a Systematic Review
  Diseases of the Colon and Rectum. Aug, 2007  |   Pubmed ID: 17588223
• The Impact of Technical Factors on Outcome of Restorative Proctocolectomy for Familial Adenomatous Polyposis
  Diseases of the Colon and Rectum. Jul, 2007  |   Pubmed ID: 17464542
• Homozygous PMS2 Deletion Causes a Severe Colorectal Cancer and Multiple Adenoma Phenotype Without Extraintestinal Cancer
  Gastroenterology. Feb, 2007  |   Pubmed ID: 17258725
• Bisulphite Differential Denaturation PCR for Analysis of DNA Methylation
  Epigenetics : Official Journal of the DNA Methylation Society. Apr-Jun, 2006  |   Pubmed ID: 17998815
• DNA Methylation: Bisulphite Modification and Analysis
  Nature Protocols. 2006  |   Pubmed ID: 17406479
• Exercise in the Heat: Effect of Fluid Ingestion on Blood-brain Barrier Permeability
  Medicine and Science in Sports and Exercise. Dec, 2006  |   Pubmed ID: 17146318
• Telomere-driven Karyotypic Complexity Concurs with P16INK4a Inactivation in TP53-competent Immortal Endothelial Cells
  Cancer Research. Nov, 2006  |   Pubmed ID: 17108106
• The Effect of Link Nurses on Hospital Readmission Rates
  Nursing Times. Oct 17-23, 2006  |   Pubmed ID: 17066881
• Current Ideas in Desmoid Tumours
  Familial Cancer. 2006  |   Pubmed ID: 16998673
• Epigenetic Remodeling in Colorectal Cancer Results in Coordinate Gene Suppression Across an Entire Chromosome Band
  Nature Genetics. May, 2006  |   Pubmed ID: 16642018
• Permissive Transcriptional Activity at the Centromere Through Pockets of DNA Hypomethylation
  PLoS Genetics. Feb, 2006  |   Pubmed ID: 16477312
• Headloop Suppression PCR and Its Application to Selective Amplification of Methylated DNA Sequences
  Nucleic Acids Research. 2005  |   Pubmed ID: 16091627
• Hypermethylation of the Prostacyclin Synthase (PTGIS) Promoter is a Frequent Event in Colorectal Cancer and Associated with Aneuploidy
  Oncogene. Nov, 2005  |   Pubmed ID: 16007128
• Confirmation of Sulfamethazine, Sulfathiazole, and Sulfadimethoxine Residues in Condensed Milk and Soft-cheese Products by Liquid Chromatography/tandem Mass Spectrometry
  Journal of AOAC International. May-Jun, 2005  |   Pubmed ID: 16001847
• Developing Empathy for Hearing-impaired Students: Can You Hear What I Hear?
  The Journal of School Health. Feb, 2005  |   Pubmed ID: 15929597
• All-optical Switching in Rubidium Vapor
  Science (New York, N.Y.). Apr, 2005  |   Pubmed ID: 15860622
• Evaluation of Decontamination Procedures Used in Primary Care
  Nursing Times. Sep 7-13, 2004  |   Pubmed ID: 15478836
• Incidence of Low Free T4 Values in Premature Infants As Determined by Direct Equilibrium Dialysis
  Journal of Perinatology : Official Journal of the California Perinatal Association. Oct, 2004  |   Pubmed ID: 15306825
• High-dose Tamoxifen and Sulindac As First-line Treatment for Desmoid Tumors
  Cancer. Aug, 2004  |   Pubmed ID: 15274082
• Alimentary Tract Surgery in the Nonagenarian: Elective Vs. Emergent Operations
  Journal of Gastrointestinal Surgery : Official Journal of the Society for Surgery of the Alimentary Tract. Jul-Aug, 2004  |   Pubmed ID: 15239987
• Transcriptional Gene Silencing Promotes DNA Hypermethylation Through a Sequential Change in Chromatin Modifications in Cancer Cells
  Cancer Research. Jun, 2004  |   Pubmed ID: 15172996
• Spirituality and Sexuality: Compatible Components for Optimal Health
  The Journal of School Health. Jan, 2004  |   Pubmed ID: 15022373
• Alterations in the P16(INK4a) and P53 Tumor Suppressor Genes of HTERT-immortalized Human Fibroblasts
  Oncogene. Apr, 2004  |   Pubmed ID: 14743210
• Health Professionals Helping the Community
  The Journal of School Health. Sep, 2003  |   Pubmed ID: 14513632
• Bisulfite Methylation Analysis of Tumor Suppressor Genes in Prostate Cancer from Fresh and Archival Tissue Samples
  Methods in Molecular Medicine. 2003  |   Pubmed ID: 12725123
• Stepwise Progression of Familial Adenomatous Polyposis-associated Desmoid Precursor Lesions Demonstrated by a Novel CT Scoring System
  Diseases of the Colon and Rectum. Apr, 2003  |   Pubmed ID: 12682541
• The Biochemistry of Antioxidants Revisited
  Nutrition in Clinical Practice : Official Publication of the American Society for Parenteral and Enteral Nutrition. Feb, 2002  |   Pubmed ID: 16214960
• Interlaboratory Comparison of Methods for the Determination of Incurred Tilmicosin Residues in Bovine Liver
  Journal of AOAC International. Nov-Dec, 2002  |   Pubmed ID: 12477187
• A Question-and-answer Approach to Drug Education
  The Journal of School Health. Oct, 2002  |   Pubmed ID: 12389376
• Confirmation of Phenylbutazone Residues in Bovine Kidney by Liquid Chromatography/mass Spectrometry
  Journal of AOAC International. Sep-Oct, 2002  |   Pubmed ID: 12374396
• DNA Methylation Changes in Leukaemia
  Seminars in Cancer Biology. Oct, 2002  |   Pubmed ID: 12191634
• DNA Methylation and Gene Silencing in Cancer: Which is the Guilty Party?
  Oncogene. Aug, 2002  |   Pubmed ID: 12154400
• Conversion-specific Detection of DNA Methylation Using Real-time Polymerase Chain Reaction (ConLight-MSP) to Avoid False Positives
  Methods (San Diego, Calif.). Jun, 2002  |   Pubmed ID: 12095268
• Methylation Sequencing from Limiting DNA: Embryonic, Fixed, and Microdissected Cells
  Methods (San Diego, Calif.). Jun, 2002  |   Pubmed ID: 12095267
• Identification and Resolution of Artifacts in Bisulfite Sequencing
  Methods (San Diego, Calif.). Jun, 2002  |   Pubmed ID: 12095266
• DNA Methylation Analysis in Mammalian Cells
  Methods (San Diego, Calif.). Jun, 2002  |   Pubmed ID: 12095265
• "Tinkering" with the Components of Health
  The Journal of School Health. Jan, 2002  |   Pubmed ID: 11865799
• Hypermethylation Trigger of the Glutathione-S-transferase Gene (GSTP1) in Prostate Cancer Cells
  Oncogene. Feb, 2002  |   Pubmed ID: 11850822
• Hypermethylation of the Inhibin Alpha-subunit Gene in Prostate Carcinoma
  Molecular Endocrinology (Baltimore, Md.). Feb, 2002  |   Pubmed ID: 11818495