Veronica Hinman

Publications

• Modular Evolution of DNA-Binding Preference of a Tbrain Transcription Factor Provides a Mechanism for Modifying Gene Regulatory Networks
  Molecular Biology and Evolution. Jul, 2014  |   Pubmed ID: 25016582
• Developmental Gene Regulatory Network Evolution: Insights from Comparative Studies in Echinoderms
  Genesis (New York, N.Y. : 2000). Mar, 2014  |   Pubmed ID: 24549884
• Expression of Wnt and Frizzled Genes During Early Sea Star Development
  Gene Expression Patterns : GEP. Dec, 2013  |   Pubmed ID: 23899422
• Gene Regulatory Network for Neurogenesis in a Sea Star Embryo Connects Broad Neural Specification and Localized Patterning
  Proceedings of the National Academy of Sciences of the United States of America. May, 2013  |   Pubmed ID: 23650356
• Probabilistic Error Correction for RNA Sequencing
  Nucleic Acids Research. May, 2013  |   Pubmed ID: 23558750
• Development of an Embryonic Skeletogenic Mesenchyme Lineage in a Sea Cucumber Reveals the Trajectory of Change for the Evolution of Novel Structures in Echinoderms
  EvoDevo. 2012  |   Pubmed ID: 22877149
• RNA Deep Sequencing Reveals Differential MicroRNA Expression During Development of Sea Urchin and Sea Star
  PloS One. 2011  |   Pubmed ID: 22216218
• Uncoupling of Complex Regulatory Patterning During Evolution of Larval Development in Echinoderms
  BMC Biology. 2010  |   Pubmed ID: 21118544
• A Conserved Gene Regulatory Network Subcircuit Drives Different Developmental Fates in the Vegetal Pole of Highly Divergent Echinoderm Embryos
  Developmental Biology. Apr, 2010  |   Pubmed ID: 19941847
• Evolution of Gene Regulatory Network Architectures: Examples of Subcircuit Conservation and Plasticity Between Classes of Echinoderms
  Biochimica Et Biophysica Acta. Apr, 2009  |   Pubmed ID: 19284985
• HHMMiR: Efficient De Novo Prediction of MicroRNAs Using Hierarchical Hidden Markov Models
  BMC Bioinformatics. 2009  |   Pubmed ID: 19208136
• Evolutionary Plasticity of Developmental Gene Regulatory Network Architecture
  Proceedings of the National Academy of Sciences of the United States of America. Dec, 2007  |   Pubmed ID: 18042699
• Caught in the Evolutionary Act: Precise Cis-regulatory Basis of Difference in the Organization of Gene Networks of Sea Stars and Sea Urchins
  Developmental Biology. Dec, 2007  |   Pubmed ID: 17956756
• Developmental Expression of Transcription Factor Genes in a Demosponge: Insights into the Origin of Metazoan Multicellularity
  Evolution & Development. Mar-Apr, 2006  |   Pubmed ID: 16509894
• Expression of AmHNF6, a Sea Star Orthologue of a Transcription Factor with Multiple Distinct Roles in Sea Urchin Development
  Gene Expression Patterns : GEP. Feb, 2005  |   Pubmed ID: 15661644
• Developmental Gene Regulatory Network Architecture Across 500 Million Years of Echinoderm Evolution
  Proceedings of the National Academy of Sciences of the United States of America. Nov, 2003  |   Pubmed ID: 14595011
• Expression and Function of a Starfish Otx Ortholog, AmOtx: a Conserved Role for Otx Proteins in Endoderm Development That Predates Divergence of the Eleutherozoa
  Mechanisms of Development. Oct, 2003  |   Pubmed ID: 14568105
• Expression of Anterior Hox Genes During Larval Development of the Gastropod Haliotis Asinina
  Evolution & Development. Sep-Oct, 2003  |   Pubmed ID: 12950629
• Expression of AmKrox, a Starfish Ortholog of a Sea Urchin Transcription Factor Essential for Endomesodermal Specification
  Gene Expression Patterns : GEP. Aug, 2003  |   Pubmed ID: 12915305
• Expression of a Gene Encoding a Gata Transcription Factor During Embryogenesis of the Starfish Asterina Miniata
  Gene Expression Patterns : GEP. Aug, 2003  |   Pubmed ID: 12915304
• Evolution and Developmental Expression of Nuclear Receptor Genes in the Ascidian Herdmania
  The International Journal of Developmental Biology. 2002  |   Pubmed ID: 12141458
• Ecological Regulation of Development: Induction of Marine Invertebrate Metamorphosis
  The International Journal of Developmental Biology. 2002  |   Pubmed ID: 12141457
• A Provisional Regulatory Gene Network for Specification of Endomesoderm in the Sea Urchin Embryo
  Developmental Biology. Jun, 2002  |   Pubmed ID: 12027441
• A Genomic Regulatory Network for Development
  Science (New York, N.Y.). Mar, 2002  |   Pubmed ID: 11872831