Yinjie J. Tang

Publications

• Integrating Flux Balance Analysis into Kinetic Models to Decipher the Dynamic Metabolism of Shewanella Oneidensis MR-1
  PLoS Computational Biology. Feb, 2012  |   Pubmed ID: 22319437
• Correlation of Genomic and Physiological Traits of Thermoanaerobacter Species with Biofuel Yields
  Applied and Environmental Microbiology. Nov, 2011  |   Pubmed ID: 21948836
• Role of Dopant Concentration, Crystal Phase and Particle Size on Microbial Inactivation of Cu-doped TiO2 Nanoparticles
  Nanotechnology. Oct, 2011  |   Pubmed ID: 21918299
• Selective Utilization of Exogenous Amino Acids by Dehalococcoides Ethenogenes Strain 195 and Its Effects on Growth and Dechlorination Activity
  Applied and Environmental Microbiology. Nov, 2011  |   Pubmed ID: 21890673
• Carbon Metabolic Pathways in Phototrophic Bacteria and Their Broader Evolutionary Implications
  Frontiers in Microbiology. 2011  |   Pubmed ID: 21866228
• Cu-doped TiO(2) Nanoparticles Enhance Survival of Shewanella Oneidensis MR-1 Under Ultraviolet Light (UV) Exposure
  The Science of the Total Environment. Oct, 2011  |   Pubmed ID: 21855961
• Evaluation of Isotope Discrimination in (13)C-based Metabolic Flux Analysis
  Analytical Biochemistry. Oct, 2011  |   Pubmed ID: 21745456
• Statistics-based Model for Prediction of Chemical Biosynthesis Yield from Saccharomyces Cerevisiae
  Microbial Cell Factories. 2011  |   Pubmed ID: 21689458
• Evaluating Factors That Influence Microbial Synthesis Yields by Linear Regression with Numerical and Ordinal Variables
  Biotechnology and Bioengineering. Apr, 2011  |   Pubmed ID: 21404262
• Nanoparticles Facilitate Gene Delivery to Microorganisms Via an Electrospray Process
  Journal of Microbiological Methods. Feb, 2011  |   Pubmed ID: 21144867
• Bridging the Gap Between Fluxomics and Industrial Biotechnology
  Journal of Biomedicine & Biotechnology. 2010  |   Pubmed ID: 21274256
• Evaluating Factors That Influence Microbial Synthesis Yields by Linear Regression with Numerical and Ordinal Variables
  Biotechnology and Bioengineering. Nov, 2010  |   Pubmed ID: 21077138
• Viability and Metal Reduction of Shewanella Oneidensis MR-1 Under CO2 Stress: Implications for Ecological Effects of CO2 Leakage from Geologic CO2 Sequestration
  Environmental Science & Technology. Dec, 2010  |   Pubmed ID: 21058700
• Metabolic Flux Analysis of the Mixotrophic Metabolisms in the Green Sulfur Bacterium Chlorobaculum Tepidum
  The Journal of Biological Chemistry. Dec, 2010  |   Pubmed ID: 20937805
• Carbon Flow of Heliobacteria is Related More to Clostridia Than to the Green Sulfur Bacteria
  The Journal of Biological Chemistry. Nov, 2010  |   Pubmed ID: 20807773
• Anti-microbial Activities of Aerosolized Transition Metal Oxide Nanoparticles
  Chemosphere. Jul, 2010  |   Pubmed ID: 20478610
• Mixotrophic and Photoheterotrophic Metabolism in Cyanothece Sp. ATCC 51142 Under Continuous Light
  Microbiology (Reading, England). Aug, 2010  |   Pubmed ID: 20430816
• Comparative Eco-toxicities of Nano-ZnO Particles Under Aquatic and Aerosol Exposure Modes
  Environmental Science & Technology. Feb, 2010  |   Pubmed ID: 20102184
• Bacterial Responses to Cu-doped TiO(2) Nanoparticles
  The Science of the Total Environment. Mar, 2010  |   Pubmed ID: 19931887
• Study of Stationary Phase Metabolism Via Isotopomer Analysis of Amino Acids from an Isolated Protein
  Biotechnology Progress. Jan-Feb, 2010  |   Pubmed ID: 19899123
• Alternative Isoleucine Synthesis Pathway in Cyanobacterial Species
  Microbiology (Reading, England). Feb, 2010  |   Pubmed ID: 19875435
• Carbohydrate Metabolism and Carbon Fixation in Roseobacter Denitrificans OCh114
  PloS One. 2009  |   Pubmed ID: 19794911
• Invariability of Central Metabolic Flux Distribution in Shewanella Oneidensis MR-1 Under Environmental or Genetic Perturbations
  Biotechnology Progress. Sep-Oct, 2009  |   Pubmed ID: 19610125
• Investigation of Carbon Metabolism in "Dehalococcoides Ethenogenes" Strain 195 by Use of Isotopomer and Transcriptomic Analyses
  Journal of Bacteriology. Aug, 2009  |   Pubmed ID: 19525347
• Characterization of the Central Metabolic Pathways in Thermoanaerobacter Sp. Strain X514 Via Isotopomer-assisted Metabolite Analysis
  Applied and Environmental Microbiology. Aug, 2009  |   Pubmed ID: 19525270
• Central Metabolism in Mycobacterium Smegmatis During the Transition from O2-rich to O2-poor Conditions As Studied by Isotopomer-assisted Metabolite Analysis
  Biotechnology Letters. Aug, 2009  |   Pubmed ID: 19357814
• Metabolic Flux Analysis of Shewanella Spp. Reveals Evolutionary Robustness in Central Carbon Metabolism
  Biotechnology and Bioengineering. Mar, 2009  |   Pubmed ID: 19031428
• Advances in Analysis of Microbial Metabolic Fluxes Via (13)C Isotopic Labeling
  Mass Spectrometry Reviews. Mar-Apr, 2009  |   Pubmed ID: 19025966
• Analysis of Metabolic Pathways and Fluxes in a Newly Discovered Thermophilic and Ethanol-tolerant Geobacillus Strain
  Biotechnology and Bioengineering. Apr, 2009  |   Pubmed ID: 19016470
• Separation and Mass Spectrometry in Microbial Metabolomics
  Current Opinion in Microbiology. Jun, 2008  |   Pubmed ID: 18538626
• Isotopomer Distributions in Amino Acids from a Highly Expressed Protein As a Proxy for Those from Total Protein
  Analytical Chemistry. Feb, 2008  |   Pubmed ID: 18179240
• Flux Analysis of Central Metabolic Pathways in Geobacter Metallireducens During Reduction of Soluble Fe(III)-nitrilotriacetic Acid
  Applied and Environmental Microbiology. Jun, 2007  |   Pubmed ID: 17468285
• Mathematical Analysis of the Whole Core Injection Method Accuracy for Measuring Phenanthrene Biodegradation Rates in Undisturbed Marine Sediments
  Chemosphere. Jun, 2007  |   Pubmed ID: 17412394
• Charge-associated Effects of Fullerene Derivatives on Microbial Structural Integrity and Central Metabolism
  Nano Letters. Mar, 2007  |   Pubmed ID: 17288489
• Anaerobic Central Metabolic Pathways in Shewanella Oneidensis MR-1 Reinterpreted in the Light of Isotopic Metabolite Labeling
  Journal of Bacteriology. Feb, 2007  |   Pubmed ID: 17114268
• Shewanella Oneidensis MR-1 Fluxome Under Various Oxygen Conditions
  Applied and Environmental Microbiology. Feb, 2007  |   Pubmed ID: 17098921
• A Kinetic Model Describing Shewanella Oneidensis MR-1 Growth, Substrate Consumption, and Product Secretion
  Biotechnology and Bioengineering. Jan, 2007  |   Pubmed ID: 16865732
• Depth-related Influences on Biodegradation Rates of Phenanthrene in Polluted Marine Sediments of Puget Sound, WA
  Marine Pollution Bulletin. Nov, 2006  |   Pubmed ID: 16780896
• Evaluation of the Effects of Various Culture Conditions on Cr(VI) Reduction by Shewanella Oneidensis MR-1 in a Novel High-throughput Mini-bioreactor
  Biotechnology and Bioengineering. Sep, 2006  |   Pubmed ID: 16732598
• Controlled Release of Nitrate and Sulfate to Enhance Anaerobic Bioremediation of Phenanthrene in Marine Sediments
  Environmental Science & Technology. May, 2005  |   Pubmed ID: 15926591
• Evaluating Factors That Influence Microbial Phenanthrene Biodegradation Rates by Regression with Categorical Variables
  Chemosphere. Apr, 2005  |   Pubmed ID: 15792671