data_file = /Users/robertmoseley/Desktop/Pipeline/inherent_dynamics_visualizer/data/files/timeseries/orlando2008_WildType_r1_trunc.tsv, /Users/robertmoseley/Desktop/Pipeline/inherent_dynamics_visualizer/data/files/timeseries/orlando2008_WildType_r2_trunc.tsv annotation_file = /Users/robertmoseley/Desktop/Pipeline/inherent_dynamics_visualizer/data/files/annotation_files/IDV_annotation_file.tsv output_dir = /Users/robertmoseley/Desktop/Pipeline/inherent_dynamics_visualizer/data/two_wts num_proc = 4 verbose = True IDVconnection = True [netper_arguments] edge_list_file = /Users/robertmoseley/Desktop/Pipeline/inherent_dynamics_visualizer/data/files/edge_files/IDV_edge_file.txt node_list_file = /Users/robertmoseley/Desktop/Pipeline/inherent_dynamics_visualizer/data/files/node_files/IDV_node_file.txt seed_net_file = /Users/robertmoseley/Desktop/Pipeline/inherent_dynamics_visualizer/data/files/seednetwork_files/IDV_seednet_file.txt range_operations = 2, 10 numneighbors = 2000 maxparams = 2000 time_to_wait = 600 [[probabilities]] addNode = 0.2 addEdge = 0.6 removeNode = 0.0 removeEdge = 0.2 [[filters]] [[[is_strongly_connected]]] [netquery_arguments] stablefc = True count = True epsilons = 0.05,