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JoVE Journal
Biology

This content is Open Access.

Using SCOPE to Identify Potential Regulatory Motifs in Coregulated Genes
 

Using SCOPE to Identify Potential Regulatory Motifs in Coregulated Genes

Article DOI: 10.3791/2703-v 07:56 min May 31st, 2011
May 31st, 2011

Chapters

Summary

A straight-forward and robust method to identify potential regulatory motifs in co-regulated genes is presented. SCOPE does not require any user parameters and returns motifs that represent excellent candidates for regulatory signals. The identification of such regulatory signals helps to understand the underlying biology.

Tags

SCOPE Regulatory Motifs Ensemble Motif Finder Component Algorithms Over-representation Motif Position Preference Telomere Maintenance Gene Analysis Gene Set Motif Score Transcription Factor Binding Sites
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