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JoVE Journal
Immunology and Infection

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Separation of Single-stranded DNA, Double-stranded DNA and RNA from an Environmental Viral Community Using Hydroxyapatite Chromatography
 
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Separation of Single-stranded DNA, Double-stranded DNA and RNA from an Environmental Viral Community Using Hydroxyapatite Chromatography

Article DOI: 10.3791/3146-v 13:47 min September 29th, 2011
September 29th, 2011

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Summary

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We describe an efficient method to separate single-stranded DNA, double-stranded DNA and RNA molecules from environmental viral communities. Nucleic acids are fractionated using hydroxyapatite chromatography with increasing concentrations of phosphate-containing buffers. This method permits the isolation of all viral nucleic acid types from environmental samples.

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Single-stranded DNA Double-stranded DNA RNA Environmental Viral Community Hydroxyapatite Chromatography Bacteriophages Genetic Diversity Metagenomic Techniques Taxonomic Diversity Functional Potential Library Construction Protocols Nuclease Treatment Collective Gene Complement Virus Diversity Purified Nucleic Acid Subtypes Calcium Phosphate
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