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IR-TEx: An Open Source Data Integration Tool for Big Data Transcriptomics Designed for the Malaria Vector Anopheles gambiae

Article DOI: 10.3791/60721-v • 08:22 min • January 15th, 2020
January 15th, 2020 •
1, 2, 3, 2, 1
1Vector Biology, Liverpool School of Tropical Medicine, 2Research Computing Unit, Liverpool School of Tropical Medicine, 3Department of Immunology and Infectious Diseases, Harvard T.H. Chan School of Public Health

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Summary
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IR-TEx explores insecticide resistance-related transcriptional profiles in the species Anopheles gambiae. Provided here are full instructions for using the application, modifications for exploring multiple transcriptomic datasets, and using the framework to build an interactive database for collections of transcriptomic data from any organism, generated in any platform.

Tags

IR-TEx Open Source Data Integration Tool Big Data Transcriptomics Malaria Vector Anopheles Gambiae Transcriptomic Data Bioinformatics Expression Data Web Application Insecticide-resistant Mosquitoes Correlation Coefficient Of Interest Isoform Data Sets Exposure Status Species Of Interest Insecticide Class
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