Erich D. Jarvis

Howard Hughes Medical Institute, Duke University

Affiliated withDuke University Duke University Medical Center Howard Hughes Medical Institute

Research Area

Biography

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JoVE Journal Publications

ArticleTotal : 3	Year
Publication title Cited by 21	2012
Publication title Cited by 9	2015
Publication title Cited by 44	2017

Other Publications

Article	Year
Genomic signatures of near-extinction and rebirth of the crested ibis and other endangered bird species. Genome biology\| PubMed ID: 25496777	2014
Evaluating functional network inference using simulations of complex biological systems. Bioinformatics (Oxford, England)\| PubMed ID: 12169550	2002
Induction of hippocampal long-term potentiation during waking leads to increased extrahippocampal zif-268 expression during ensuing rapid-eye-movement sleep. The Journal of neuroscience : the official journal of the Society for Neuroscience\| PubMed ID: 12486186	2002
Influence of network topology and data collection on network inference. Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing\| PubMed ID: 12603026	2003
Analysis of the mouse transcriptome for genes involved in the function of the nervous system. Genome research\| PubMed ID: 12819138	2003
Revised nomenclature for avian telencephalon and some related brainstem nuclei. The Journal of comparative neurology\| PubMed ID: 15116397	2004
Differential expression of glutamate receptors in avian neural pathways for learned vocalization. The Journal of comparative neurology\| PubMed ID: 15236466	2004
Advances to Bayesian network inference for generating causal networks from observational biological data. Bioinformatics (Oxford, England)\| PubMed ID: 15284094	2004
Songbirds and the revised avian brain nomenclature. Annals of the New York Academy of Sciences\| PubMed ID: 15313771	2004
Learned birdsong and the neurobiology of human language. Annals of the New York Academy of Sciences\| PubMed ID: 15313804	2004
Avian brains and a new understanding of vertebrate brain evolution. Nature reviews. Neuroscience\| PubMed ID: 15685220	2005
Night-vision brain area in migratory songbirds. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 15928090	2005
Rapid behavioral and genomic responses to social opportunity. PLoS biology\| PubMed ID: 16216088	2005
Social context-dependent singing-regulated dopamine. The Journal of neuroscience : the official journal of the Society for Neuroscience\| PubMed ID: 16943558	2006
A molecular neuroethological approach for identifying and characterizing a cascade of behaviorally regulated genes. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 17018643	2006
Computational inference of neural information flow networks. PLoS computational biology\| PubMed ID: 17121460	2006
Lateralized activation of Cluster N in the brains of migratory songbirds. The European journal of neuroscience\| PubMed ID: 17331212	2007
The pallial basal ganglia pathway modulates the behaviorally driven gene expression of the motor pathway. The European journal of neuroscience\| PubMed ID: 17419760	2007
Role of the midbrain dopaminergic system in modulation of vocal brain activation by social context. The European journal of neuroscience\| PubMed ID: 17553009	2007
Molecular mapping of movement-associated areas in the avian brain: a motor theory for vocal learning origin. PloS one\| PubMed ID: 18335043	2008
Profiling of experience-regulated proteins in the songbird auditory forebrain using quantitative proteomics. The European journal of neuroscience\| PubMed ID: 18364021	2008
VOCALIZATIONS AND ASSOCIATED BEHAVIORS OF THE SOMBRE HUMMINGBIRD (APHANTOCHROA CIRRHOCHLORIS) AND THE RUFOUS-BREASTED HERMIT (GLAUCIS HIRSUTUS). The Auk\| PubMed ID: 18802498	2006
Assessing visual requirements for social context-dependent activation of the songbird song system. Proceedings. Biological sciences / The Royal Society\| PubMed ID: 18826930	2009
Early onset of deafening-induced song deterioration and differential requirements of the pallial-basal ganglia vocal pathway. The European journal of neuroscience\| PubMed ID: 19087177	2008
The Avian Brain Nomenclature Forum: Terminology for a New Century in Comparative Neuroanatomy. The Journal of comparative neurology\| PubMed ID: 19626136	2004
Neural systems for vocal learning in birds and humans: a synopsis. Journal of ornithology / DO-G\| PubMed ID: 19684872	2007
Dopamine receptors in a songbird brain. The Journal of comparative neurology\| PubMed ID: 20058221	2010
Comparative genomics based on massive parallel transcriptome sequencing reveals patterns of substitution and selection across 10 bird species. Molecular ecology\| PubMed ID: 20331785	2010
The genome of a songbird. Nature\| PubMed ID: 20360741	2010
The dusp1 immediate early gene is regulated by natural stimuli predominantly in sensory input neurons. The Journal of comparative neurology\| PubMed ID: 20506480	2010
Obtaining mtDNA genomes from next-generation transcriptome sequencing: a case study on the basal Passerida (Aves: Passeriformes) phylogeny. Molecular phylogenetics and evolution\| PubMed ID: 20601014	2010
Night-time neuronal activation of Cluster N in a day- and night-migrating songbird. The European journal of neuroscience\| PubMed ID: 20618826	2010
Microproteomics: quantitative proteomic profiling of small numbers of laser-captured cells. Cold Spring Harbor protocols\| PubMed ID: 21285273	2011
Dynamic evolution of base composition: causes and consequences in avian phylogenomics. Molecular biology and evolution\| PubMed ID: 21393604	2011
Convergent differential regulation of parvalbumin in the brains of vocal learners. PloS one\| PubMed ID: 22238614	2012
Dopamine regulation of human speech and bird song: A critical review. Brain and language\| PubMed ID: 22284300	2012
Sequencing three crocodilian genomes to illuminate the evolution of archosaurs and amniotes. Genome biology\| PubMed ID: 22293439	2012
Hybrid error correction and de novo assembly of single-molecule sequencing reads. Nature biotechnology\| PubMed ID: 22750884	2012
Interspecies avian brain chimeras reveal that large brain size differences are influenced by cell-interdependent processes. PloS one\| PubMed ID: 22860132	2012
Specialized motor-driven dusp1 expression in the song systems of multiple lineages of vocal learning birds. PloS one\| PubMed ID: 22876306	2012
Birds, primates, and spoken language origins: behavioral phenotypes and neurobiological substrates. Frontiers in evolutionary neuroscience\| PubMed ID: 22912615	2012
Of mice, birds, and men: the mouse ultrasonic song system has some features similar to humans and song-learning birds. PloS one\| PubMed ID: 23071596	2012
Mouse vocal communication system: are ultrasounds learned or innate? Brain and language\| PubMed ID: 23295209	2013
Global view of the functional molecular organization of the avian cerebrum: mirror images and functional columns. The Journal of comparative neurology\| PubMed ID: 23818122	2013
Molecular profiling of the developing avian telencephalon: regional timing and brain subdivision continuities. The Journal of comparative neurology\| PubMed ID: 23818174	2013
Rudimentary substrates for vocal learning in a suboscine. Nature communications\| PubMed ID: 23823977	2013
Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species. GigaScience\| PubMed ID: 23870653	2013
Different mechanisms are responsible for dishabituation of electrophysiological auditory responses to a change in acoustic identity than to a change in stimulus location. Neurobiology of learning and memory\| PubMed ID: 23999220	2013
Mammalian genes induce partially reprogrammed pluripotent stem cells in non-mammalian vertebrate and invertebrate species. eLife\| PubMed ID: 24015354	2013
NSF workshop report: discovering general principles of nervous system organization by comparing brain maps across species. The Journal of comparative neurology\| PubMed ID: 24596113	2014
NSF workshop report: discovering general principles of nervous system organization by comparing brain maps across species. Brain, behavior and evolution\| PubMed ID: 24603302	2014
High-coverage sequencing and annotated assemblies of the budgerigar genome. GigaScience\| PubMed ID: 25061512	2014
Basal ganglia function, stuttering, sequencing, and repair in adult songbirds. Scientific reports\| PubMed ID: 25307086	2014
Convergent differential regulation of SLIT-ROBO axon guidance genes in the brains of vocal learners. The Journal of comparative neurology\| PubMed ID: 25424606	2015
Comparative genomics reveals molecular features unique to the songbird lineage. BMC genomics\| PubMed ID: 25494627	2014
Genomic resources for the endangered Hawaiian honeycreepers. BMC genomics\| PubMed ID: 25496081	2014
Dynamic evolution of the alpha (α) and beta (β) keratins has accompanied integument diversification and the adaptation of birds into novel lifestyles. BMC evolutionary biology\| PubMed ID: 25496280	2014
Low frequency of paleoviral infiltration across the avian phylogeny. Genome biology\| PubMed ID: 25496498	2014
Evidence for GC-biased gene conversion as a driver of between-lineage differences in avian base composition. Genome biology\| PubMed ID: 25496599	2014
Reconstruction of gross avian genome structure, organization and evolution suggests that the chicken lineage most closely resembles the dinosaur avian ancestor. BMC genomics\| PubMed ID: 25496766	2014
Avian genomes. A flock of genomes. Introduction. Science (New York, N.Y.)\| PubMed ID: 25504710	2014
Comparative genomics reveals insights into avian genome evolution and adaptation. Science (New York, N.Y.)\| PubMed ID: 25504712	2014
Whole-genome analyses resolve early branches in the tree of life of modern birds. Science (New York, N.Y.)\| PubMed ID: 25504713	2014
Complex evolutionary trajectories of sex chromosomes across bird taxa. Science (New York, N.Y.)\| PubMed ID: 25504727	2014
Evidence for a single loss of mineralized teeth in the common avian ancestor. Science (New York, N.Y.)\| PubMed ID: 25504730	2014
Three crocodilian genomes reveal ancestral patterns of evolution among archosaurs. Science (New York, N.Y.)\| PubMed ID: 25504731	2014
Core and region-enriched networks of behaviorally regulated genes and the singing genome. Science (New York, N.Y.)\| PubMed ID: 25504732	2014
Convergent transcriptional specializations in the brains of humans and song-learning birds. Science (New York, N.Y.)\| PubMed ID: 25504733	2014
The basal ganglia within a cognitive system in birds and mammals. The Behavioral and brain sciences\| PubMed ID: 25514958	2014
Evolutionary genomics and adaptive evolution of the Hedgehog gene family (Shh, Ihh and Dhh) in vertebrates. PloS one\| PubMed ID: 25549322	2014
Maintenance and neuronal differentiation of chicken induced pluripotent stem-like cells. Stem cells international\| PubMed ID: 25610469	2014
Comparative genomic data of the Avian Phylogenomics Project. GigaScience\| PubMed ID: 25671091	2014
Two Antarctic penguin genomes reveal insights into their evolutionary history and molecular changes related to the Antarctic environment. GigaScience\| PubMed ID: 25671092	2014
Phylogenomic analyses data of the avian phylogenomics project. GigaScience\| PubMed ID: 25741440	2015
Male mice song syntax depends on social contexts and influences female preferences. Frontiers in behavioral neuroscience\| PubMed ID: 25883559	2015
Genomics: Bird sequencing project takes off. Nature\| PubMed ID: 26040883	2015
Core and Shell Song Systems Unique to the Parrot Brain. PloS one\| PubMed ID: 26107173	2015
A refined model of the genomic basis for phenotypic variation in vertebrate hemostasis. BMC evolutionary biology\| PubMed ID: 26123414	2015
Olfactory Receptor Subgenomes Linked with Broad Ecological Adaptations in Sauropsida. Molecular biology and evolution\| PubMed ID: 26219582	2015