Fred E. Regnier

Publications

• A Lectin Chromatography/mass Spectrometry Discovery Workflow Identifies Putative Biomarkers of Aggressive Breast Cancers
  Journal of Proteome Research. Feb, 2012  |   Pubmed ID: 22309216
• Effect of Single Amino Acid Substitution on Oxidative Modifications of the Parkinson's Disease-Related Protein, DJ-1
  Molecular & Cellular Proteomics : MCP. Feb, 2012  |   Pubmed ID: 22104028
• Determining the Effects of Antioxidants on Oxidative Stress Induced Carbonylation of Proteins
  Analytical Chemistry. Dec, 2011  |   Pubmed ID: 21939227
• Oxidative Stress Induced Carbonylation in Human Plasma
  Journal of Proteomics. Oct, 2011  |   Pubmed ID: 21856457
• Differential Carbonylation of Proteins As a Function of in Vivo Oxidative Stress
  Journal of Proteome Research. Sep, 2011  |   Pubmed ID: 21800835
• A Large, Consistent Plasma Proteomics Data Set from Prospectively Collected Breast Cancer Patient and Healthy Volunteer Samples
  Journal of Translational Medicine. 2011  |   Pubmed ID: 21619653
• A Lectin Affinity Workflow Targeting Glycosite-specific, Cancer-related Carbohydrate Structures in Trypsin-digested Human Plasma
  Analytical Biochemistry. Jan, 2011  |   Pubmed ID: 20705048
• Coupling Protein Complex Analysis to Peptide Based Proteomics
  Journal of Chromatography. A. Dec, 2010  |   Pubmed ID: 21036361
• Dynamics of Protein Damage in Yeast Frataxin Mutant Exposed to Oxidative Stress
  Omics : a Journal of Integrative Biology. Dec, 2010  |   Pubmed ID: 20958246
• Sialylated Lewis X Antigen Bearing Glycoproteins in Human Plasma
  Journal of Proteome Research. Nov, 2010  |   Pubmed ID: 20858014
• Proteomic Identification of Carbonylated Proteins and Their Oxidation Sites
  Journal of Proteome Research. Aug, 2010  |   Pubmed ID: 20521848
• Screening Antibody and Immunosorbent Selectivity by Two-dimensional Liquid Chromatography-MS/MS (2-D LC-MS/MS)
  Journal of Separation Science. Jun, 2010  |   Pubmed ID: 20405482
• Multi-dimensional Liquid Chromatography in Proteomics--a Review
  Analytica Chimica Acta. Apr, 2010  |   Pubmed ID: 20363391
• Profiling Carbonylated Proteins in Human Plasma
  Journal of Proteome Research. Mar, 2010  |   Pubmed ID: 20121119
• Analytical Validation of Protein-based Multiplex Assays: a Workshop Report by the NCI-FDA Interagency Oncology Task Force on Molecular Diagnostics
  Clinical Chemistry. Feb, 2010  |   Pubmed ID: 20007859
• Protein-based Multiplex Assays: Mock Presubmissions to the US Food and Drug Administration
  Clinical Chemistry. Feb, 2010  |   Pubmed ID: 20007858
• In Vitro Stable Isotope Labeling for Discovery of Novel Metabolites by Liquid Chromatography-mass Spectrometry: Confirmation of Gamma-tocopherol Metabolism in Human A549 Cell
  Journal of Chromatography. A. Jan, 2010  |   Pubmed ID: 20006340
• Sweetening the Pot: Adding Glycosylation to the Biomarker Discovery Equation
  Clinical Chemistry. Feb, 2010  |   Pubmed ID: 19959616
• Oxidative Stress Studies in Yeast with a Frataxin Mutant: a Proteomics Perspective
  Journal of Proteome Research. Feb, 2010  |   Pubmed ID: 19957947
• Repeatability and Reproducibility in Proteomic Identifications by Liquid Chromatography-tandem Mass Spectrometry
  Journal of Proteome Research. Feb, 2010  |   Pubmed ID: 19921851
• Interlaboratory Study Characterizing a Yeast Performance Standard for Benchmarking LC-MS Platform Performance
  Molecular & Cellular Proteomics : MCP. Feb, 2010  |   Pubmed ID: 19858499
• Performance Metrics for Liquid Chromatography-tandem Mass Spectrometry Systems in Proteomics Analyses
  Molecular & Cellular Proteomics : MCP. Feb, 2010  |   Pubmed ID: 19837981
• Multi-site Assessment of the Precision and Reproducibility of Multiple Reaction Monitoring-based Measurements of Proteins in Plasma
  Nature Biotechnology. Jul, 2009  |   Pubmed ID: 19561596
• Glycoproteomics of Plasma Based on Narrow Selectivity Lectin Affinity Chromatography
  Journal of Proteome Research. Feb, 2009  |   Pubmed ID: 19099503
• Comparative Metabolite Profiling of Carboxylic Acids in Rat Urine by CE-ESI MS/MS Through Positively Pre-charged and (2)H-coded Derivatization
  Electrophoresis. Nov, 2008  |   Pubmed ID: 19035407
• Simultaneous Quantification of Metabolites Involved in Central Carbon and Energy Metabolism Using Reversed-phase Liquid Chromatography-mass Spectrometry and in Vitro 13C Labeling
  Analytical Chemistry. Dec, 2008  |   Pubmed ID: 19007244
• Use of Glycan Targeting Antibodies to Identify Cancer-associated Glycoproteins in Plasma of Breast Cancer Patients
  Analytical Chemistry. Jul, 2008  |   Pubmed ID: 18558770
• Two-dimensional Correlation Optimized Warping Algorithm for Aligning GC X GC-MS Data
  Analytical Chemistry. Apr, 2008  |   Pubmed ID: 18351753
• Comprehensive Two-dimensional Gas Chromatography/time-of-flight Mass Spectrometry Peak Sorting Algorithm
  Journal of Chromatography. A. Feb, 2008  |   Pubmed ID: 18093607
• Differential Metabolomics Using Stable Isotope Labeling and Two-dimensional Gas Chromatography with Time-of-flight Mass Spectrometry
  Analytical Chemistry. Jan, 2008  |   Pubmed ID: 18052339
• Adaptive Interferometry of Protein on a BioCD
  Applied Optics. Aug, 2007  |   Pubmed ID: 17676154
• Enhancement of the LC/MS Analysis of Fatty Acids Through Derivatization and Stable Isotope Coding
  Analytical Chemistry. Jul, 2007  |   Pubmed ID: 17492837
• An Isotope Coding Strategy for Proteomics Involving Both Amine and Carboxyl Group Labeling
  Methods in Molecular Biology (Clifton, N.J.). 2007  |   Pubmed ID: 17484114
• Destabilization of DJ-1 by Familial Substitution and Oxidative Modifications: Implications for Parkinson's Disease
  Biochemistry. May, 2007  |   Pubmed ID: 17451229
• Neural Network Prediction of Peptide Separation in Strong Anion Exchange Chromatography
  Bioinformatics (Oxford, England). Jan, 2007  |   Pubmed ID: 17092987
• Targeted Glycoproteomics: Serial Lectin Affinity Chromatography in the Selection of O-glycosylation Sites on Proteins from the Human Blood Proteome
  Journal of Chromatography. A. Nov, 2006  |   Pubmed ID: 16919642
• Enhancement of Amino Acid Detection and Quantification by Electrospray Ionization Mass Spectrometry
  Analytical Chemistry. Jul, 2006  |   Pubmed ID: 16808485
• Primary Amine Coding As a Path to Comparative Proteomics
  Proteomics. Jul, 2006  |   Pubmed ID: 16800033
• Comparative Glycoproteomics of N-linked Complex-type Glycoforms Containing Sialic Acid in Human Serum
  Analytical Chemistry. Nov, 2005  |   Pubmed ID: 16285669
• Recent Advancements in Differential Proteomics Based on Stable Isotope Coding
  Briefings in Functional Genomics & Proteomics. Jul, 2005  |   Pubmed ID: 16102271
• An Automated Method for the Analysis of Stable Isotope Labeling Data in Proteomics
  Journal of the American Society for Mass Spectrometry. Jul, 2005  |   Pubmed ID: 15922621
• Use of Multidimensional Lectin Affinity Chromatography in Differential Glycoproteomics
  Analytical Chemistry. May, 2005  |   Pubmed ID: 15859596
• Processing of Data Generated by 2-dimensional Gel Electrophoresis for Statistical Analysis: Missing Data, Normalization, and Statistics
  Journal of Proteome Research. Nov-Dec, 2004  |   Pubmed ID: 15595730
• Optimization of Diagonal Chromatography for Recognizing Post-translational Modifications
  Journal of Chromatography. A. Aug, 2004  |   Pubmed ID: 15460252
• Benzoyl Derivatization As a Method to Improve Retention of Hydrophilic Peptides in Tryptic Peptide Mapping
  Analytical Chemistry. Oct, 2004  |   Pubmed ID: 15456300
• New Approach for Analysis of the Phosphotyrosine Proteome and Its Application to the Chicken B Cell Line, DT40
  Journal of Proteome Research. Jul-Aug, 2004  |   Pubmed ID: 15359727
• Enrichment of Cysteine-containing Peptides from Tryptic Digests Using a Quaternary Amine Tag
  Analytical Chemistry. Aug, 2004  |   Pubmed ID: 15283597
• Proteomic Analysis of Carbonylated Proteins in Two-dimensional Gel Electrophoresis Using Avidin-fluorescein Affinity Staining
  Electrophoresis. May, 2004  |   Pubmed ID: 15174056
• High-speed Label-free Detection by Spinning-disk Micro-interferometry
  Biosensors & Bioelectronics. Jun, 2004  |   Pubmed ID: 15093207
• Proteomic Analysis of Arabidopsis Glutathione S-transferases from Benoxacor- and Copper-treated Seedlings
  The Journal of Biological Chemistry. Jun, 2004  |   Pubmed ID: 15069083
• Contributions of Commercial Sorbents to the Selectivity in Immobilized Metal Affinity Chromatography with Cu(II)
  Journal of Chromatography. A. Mar, 2004  |   Pubmed ID: 15058570
• Potential of Silica Monolithic Columns in Peptide Separations
  Journal of Chromatography. A. Mar, 2004  |   Pubmed ID: 15043268
• Effect of Microenvironment PH of Aluminum Hydroxide Adjuvant on the Chemical Stability of Adsorbed Antigen
  Vaccine. Mar, 2004  |   Pubmed ID: 15003645
• Histidine-rich Peptide Selection and Quantification in Targeted Proteomics
  Journal of Proteome Research. Jan-Feb, 2004  |   Pubmed ID: 14998161
• Regio-specific Adsorption of Cytochrome C on Negatively Charged Surfaces
  Analytical Chemistry. Apr, 2003  |   Pubmed ID: 12713053
• Stopped-flow Enzyme Assays on a Chip Using a Microfabricated Mixer
  Analytical Chemistry. Apr, 2003  |   Pubmed ID: 12713034
• Protein Proteolysis and the Multi-dimensional Electrochromatographic Separation of Histidine-containing Peptide Fragments on a Chip
  Journal of Chromatography. A. Jan, 2003  |   Pubmed ID: 12564680
• Capillary Electrochromatography of Peptides on Microfabricated Poly(dimethylsiloxane) Chips Modified by Cerium(IV)-catalyzed Polymerization
  Journal of Chromatography. A. Mar, 2002  |   Pubmed ID: 12831199
• An Isotope Coding Strategy for Proteomics Involving Both Amine and Carboxyl Group Labeling
  Journal of Proteome Research. Sep-Oct, 2002  |   Pubmed ID: 12645916
• Minimizing Resolution of Isotopically Coded Peptides in Comparative Proteomics
  Journal of Proteome Research. Mar-Apr, 2002  |   Pubmed ID: 12643534
• Controlling Deuterium Isotope Effects in Comparative Proteomics
  Analytical Chemistry. Aug, 2002  |   Pubmed ID: 12175151
• Global Internal Standard Technology for Comparative Proteomics
  Journal of Chromatography. A. Mar, 2002  |   Pubmed ID: 11999733
• Quantitative Proteomics Strategy Involving the Selection of Peptides Containing Both Cysteine and Histidine from Tryptic Digests of Cell Lysates
  Journal of Chromatography. A. Mar, 2002  |   Pubmed ID: 11999731
• Quantifying Peptides in Isotopically Labeled Protease Digests by Ion Mobility/time-of-flight Mass Spectrometry
  Analytical Chemistry. Mar, 2002  |   Pubmed ID: 11924997
• Comparative Proteomics Based on Stable Isotope Labeling and Affinity Selection
  Journal of Mass Spectrometry : JMS. Feb, 2002  |   Pubmed ID: 11857757