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A Craniotomy Surgery Procedure for Chronic Brain Imaging
Ricardo Mostany, Carlos Portera-Cailliau
Department of Neurology, University of California, Los Angeles

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0:00 Title0

0:21 Subscription Lock21

0:50 Introduction50

1:26 Chronic Craniotomy Surgery86

6:57 Imaging through the Cranial Window417

8:15 Conclusion495

Imaging techniques are becoming increasingly important in the study brain function. Among them, two-photon laser scanning microscopy has emerged as an extremely useful method, because it allows the study of the live intact brain. With appropriate preparations, this technique allows the observation of the same cortical area chronically, from minutes to months. In this video, we show a preparation for chronic in vivo imaging of the brain using two-photon microscopy. This technique was initially pioneered by Dr. Karel Svoboda, who is now a Howard Hughes Medical Institute Investigator at Janelia Farm. Preparations like the one shown here can be used for imaging of neocortical structure (e.g., dendritic and axonal dynamics), to record neuronal activity using calcium-sensitive dyes, to image cortical blood flow dynamics, or for intrinsic optical imaging studies. Deep imaging of the neocortex is possible with optimal cranial window surgeries. Operating under the most sterile conditions possible to avoid infections, together with using extreme care to do not damage the dura mater during the surgery, will result in successful and long-lasting glass-covered cranial windows.

 

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  1. Anesthetize mice with isoflurane (4% for induction, 1.5-2% for surgery) using IACUC approved procedures. It is important that tail and/or toe pinches are used in order to ensure the animal is fully sedated.
  2. Using a rodent trimmer, shave the hair from the back of the neck up to the eyes.
  3. Place the mouse in a stereotaxic frame, over a surgery water re-circulating blanket. Firmly secure the head with ear bars.
  4. Apply eye ointment, in order to prevent the animal's eye from drying out.
  5. Administer, subcutaneously, Dexamethasone (0.2 mg/Kg) and Carprofen (5 mg/Kg) to prevent swelling of the brain and/or an inflammatory response, respectively.
  6. Before beginning the surgery, sterilize the operating area by wiping skin with three alternating swipes of 70% alcohol and betadine.
  7. All surgical instruments have been pre-sterilized using a glass bead sterilizer. Using scissors that have been sterilized with ethanol, remove the skin over the top of the skull, starting with a horizontal cut all along the base of the head, followed by two cuts in the rostral direction, almost reaching the eyelids, then two oblique cuts that converge at the midline.
  8. A drop of lidocaine + epinephrine solution is applied at this point onto the periosteum to avoid excessive bleeding or pain. With a scalpel, retract the periosteum to the edges of the skull.  Also, lightly retract the musculature of the back of the neck.
  9. Gently scrape the entire exposed area of the skull with the scalpel to create a dry surface. This is very important, as it will allow the glue to adhere better when applied later.
  10. Once an imaging site has been chosen, one is ready to create the cranial window. First, gently "draw" a circle of about 4 mm in diameter with the pneumatic dental drill.
  11. After a slight drilling, apply lidocaine + epinephrine solution again onto the skull surface. Stop the drilling when a very thin layer of bone is left. By pushing gently on the center of the craniotomy to feel how it gives way, one can usually know that this stage is reached.
  12. Under a drop of saline and taking advantage of the bone trabeculae - the spongy structure of the bone - lift away the craniotomy from the skull with very thin tip forceps. The saline is important, as it will help lift up the skull and prevent bleeding of the dura.
  13. Apply Gelfoam that has been previously soaked in saline to the dura mater to stop any small bleeding that occassionally occurs when the skull is removed.
  14. After drying the dura mater surface and ensuring that there is no bleeding, gently lay a sterile 5 mm glass cover slip on top of the dura mater. (Note: other groups also place a drop of low melting point agarose (1.2%) over the dura and put the coverslip on top of the agar).
  15. Apply a drop of cyanocrylate-based glue to the opposite hemisphere on the skull. With the help of a needle, gently apply the glue all around the window while being careful not to put it under the glass. Glue can now be applied in a thin layer over the entire surface of the skull.
  16. Once the glue has dried, mix dental acrylic and apply it throughout the skull surface, covering also a small rim of the cover slip, to secure it.
  17. After securing the cover slip, make a small well around the window with dental acrylic. Also, embed a titanium bar in the dental acrylic. This bar will later be used to attach the mouse securely on to the stage of the microscope for imaging. It is important to ensure that the bar is level, so that it is parallel with the cranial window. Placing a piece of paper under the bar can allow the bar to remain level while the acrylic hardens.
  18. The dental acrylic is allowed to cure (harden) for 10 minutes, by which time the titanium bar is fixed in place. Place the animal in a warm cage until it recovers.
  19. After recovery from anesthesia, the animal can be imaged on the same day.

As we have shown in the video and in the supplementary figures, the cranial window preparation, combined with the use of two-photon microscopy, is a very powerful tool to study in vivo the structure and function of the neocortex. The technique requires rigorous training to become familiar with the relevant anatomy and the fine surgical procedures and skills that this preparation requires. Only pristine surgeries can be used for chronic imaging. If the dura is manipulated excessively or punctured, the preparation should not be used for imaging.

Name  Type  Company  Catalog Number  Comments
Carprofen (Rimadyl) Drug Pfizer
Isoflurane (Aerrane) Surgery Baxter
Dexamethasone Drug Baxter
Ortho-Jet Powder Reagent LANG To be mixed with the acrylic
Jet-Acrylic Liquid Reagent LANG To be mixed with Ortho-Jet Powder
Round Glass Cover Slip Tool Electron Microscopy Sciences 72195-05 5 mm diameter
Gelfoam Surgery Pharmacia & Upjohn Co. (Pfizer)
Titanium bars are custom-made

1. Svoboda K, Denk W, Kleinfeld D, Tank DW. In vivo dendritic calcium dynamics in neocortical pyramidal neurons. Nature. 85, 161-5 (1997)

2. Lendvai B, Stern EA, Chen B, Svoboda K. Experience-dependent plasticity of dendritic spines in the developing rat barrel cortex in vivo. Nature. 404, 876-81 (2000)

3. Trachtenberg JT, Chen B, Knott GW, Feng G, Sanes JR, Welker E, Svoboda K. Long-term in vivo imaging of experience-dependent synaptic plasticity in adult cortex. Nature. 420, 788-94 (2002)

4. Portera-Cailliau C, Weimer RM, DePaola V, Caroni P, Svoboda K. Diverse modes of axon elaboration in the developing neocortex. PLoS Biol. 3, e272 (2005)

5. Holtmaat A, L Wilbrecht, Knott GW, Welker E, Svoboda K. Experience-dependent and cell-type-specific spine growth in the neocortex.Nature.441,979-83 (2006)

Mostany R, Portera-Cailliau C (2008). A Craniotomy Surgery Procedure for Chronic Brain Imaging. JoVE. 12. http://www.jove.com/index/details.stp?id=680, doi: 10.3791/680
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03/25/2008 8:05:06 AM
allegra responded with a statement of type: Neutral

Hello,

I'm a PhD student from Florence, Italy, and I wuold like to know what is the concentration of the epinephrine/lidocaine solution that you use.

Thanks,

Anna Letizia Allegra

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03/25/2008 1:49:07 PM
Mostany responded with a statement of type: Neutral

Hello Anna,

We use a Lidocaine HCl 1% and Epinephrine 1:100,000 solution. This solution is comercially available from several companies. Ours is from Hospira, Inc.

Hope this helps you. Good luck

Ricardo Mostany

 

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02/11/2009 8:10:56 PM
Zuzanna responded with a statement of type: Neutral

Hi,

thank you for the very useful video! What do you think about the use of lidocaine-epinephrin in acute, as opposed to chronic, preparations? I.e. do you think the solution applied to the skull during surgery could have effects on neuronal activity imaged soon afterwards - like an hour or two later?

Best,

Zuzanna Piwkowska

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04/17/2009 1:38:31 PM
Mostany responded with a statement of type: Neutral

Hello Zuzanna

The purpose of the lidocaine-epinephrin is double; to reduce pain sensation (from the incision in the skin) and to reduce bleeding from skull while drilling. I apply it very soon in the surgery: before removing the periosteum and sometimes after drilling for a little while the skull (when starting to drill the spongy bone). My guess is that it shouldn't have any effect on neuronal activity. I don't know what could happen in case you apply it later on during the surgery, when the dura is accesible (and even with some minimal nicks).

Good luck

Ricardo

 

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06/17/2008 8:06:56 PM
Daniel Polley responded with a statement of type: Neutral

Hi,

Could you provide me with the manufacturer and model number of the pneumatic drill that you use?

 

Thanks a lot,

 

Dan

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06/17/2008 9:48:31 PM
Peyman Golshani responded with a statement of type: Neutral

Hi,

 

We bought our pneumatic drill from Henry Schein:

Traditional Handpiece with Power Lever Catalogue # 7726063.

Laboratory Handpiece Control Kit:  Cat # 6427057.

 

If you can't find the second item, you can google "Laboratory Handpiece Control Kit" and a number of other vendors will come up.

 

 

 

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07/03/2008 1:19:44 PM
James T. Russell responded with a statement of type: Neutral

Hello,

Could you please tell me the dimensions of your titanium bar, and also its weight?

Thanks for your help.

James T. Russell

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07/07/2008 2:20:12 PM
Mostany responded with a statement of type: Neutral

Hello James,

The dimensions of the titanium bar are these (all in inches):

0.125x0.375x0.05

The holes are two #2-56 tapped holes, symmetrically located at both edges of the bar. Only one hole is necessary but the other one helps to attach (embed) the Ti bar to the acrylic.

The weight is around 130mg

Good luck

Ricardo Mostany

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07/09/2008 6:13:50 AM
MTR responded with a statement of type: Question

Thanks for the useful video. We are following a similar procedure which differs very slightly and works great without any flaw. My question here is not about the glass window but about a thin skull chronic preparation. I tried it a few times…It is great on Day 1 but become opaque on day 2. You can’t see on day 2 as clearly as you did on day 1 any vasculature or dendrites through the window? What is your experience in thin skull chronic preparation? Do U have any comments?

 

Thanks

 

MTR

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07/09/2008 5:35:56 PM
Mostany responded with a statement of type: Neutral

Hello,

We haven't done that preparation. We had heard about that disadvantage before. You have to do the thinning repeteadly because the bone grows back and makes difficult to do the imaging. I don't know if in two consecutive days this is so critical.

Good luck

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07/11/2008 3:30:02 PM
MTR responded with a statement of type: Neutral

Thanks for your response. I think in addition to growth of bone (which may take some time to happen) there is wound healing process that starts in the bone which reduces the transparency. I will be trying more mice though. Thanks.

 

MTR

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07/09/2008 4:11:19 PM
nikitab responded with a statement of type: Neutral

test

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09/17/2008 7:20:16 AM
Ralph responded with a statement of type: Neutral

Hello Ricardo,

I saw the video and I think this helps a lot of people by seeing how surgery is done. Very nice.

Just a tip about using acrylic cement. We use "GC Fuji Plus" a glass ionomer luting dental cement (with supportscrews in rats) which comes in capsules. It hardens very fast ( 1-2 min.) so you don't have to wait but you can almost instandly continue your surgery. I don't know if it mounts very strong on cyanocrylate-based glue or maybe directly onto the skull. You'll have to test that.

regards

Ralph

 

 

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09/17/2008 1:36:02 PM
Mostany responded with a statement of type: Neutral

Hello Ralphs,


Thanks a lot for your comment. That dental cement could be helpfull too. I will let you know if I have a chance to try it and give you my feedback.


Best

Ricardo

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11/01/2008 11:17:39 PM
Tom Richner responded with a statement of type: Neutral

Hi Ricardo and Ralph,

We use a UV acrylic from Pentron Dental that sets in 10 seconds under UV light.

Tom

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09/18/2008 4:18:35 AM
xuan huang responded with a statement of type: Neutral

Hello,

The video is helpful for me. We are planning to conduct similar chronic craniotomy surgery on rats. The difference is that we want to drill three 1mm diameter holes and implant microelectrodes into the brain. So use harmless glue is important for us.

My question is why not use acrylic cement directly and is the cyanocrylate-based glue you used poisonous to the brain?

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09/18/2008 4:23:39 AM
xuan huang responded with a statement of type: Neutral

Hello,

The video is wery helpful for me. We are planning to conduct similar chronic craniotomy surgery on rats. The difference is that we want to drill three 1mm diameter holes and implant microelectrodes into the brain. So use harmless glue is important for us.

My question is why not use acrylic cement directly and is the cyanocrylate-based glue you used poisonous to the brain?

Best,

Xuan

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09/18/2008 3:26:39 PM
Mostany responded with a statement of type: Neutral

Hi,

Acrylic cement needs more time to cure and secure the window than these cyanocrylate glues. So the risk of getting glue or acrylic under the cover glass diminishes. That's why I rather the glue. In your case, I don't know how this will affect.

Regarding the toxicity of these glues. If you do the surgery properly, only the very outer edges of the window will be in contact with the glue. Anyhow, these cyanocrylate based glues are also used in open wounds to keep the edges together (e.g. Nexaband). I have never observed damaged tissue in the window because of the glue, even after perfussion and histological studies.

 

Regards

Ricardo.

 

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03/18/2009 1:15:51 PM
jason responded with a statement of type: Neutral

i'd also add that it is important to create an "air-tight" seal around the window - the acrylic is likely to be porous.  i tried using only cement (dental cement, bone cement) to seal and the windows only last 3-4 weeks, whereas using glue all the way around keeps them good for months and markedly improves success rate.

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09/27/2008 7:11:47 PM
Raquel Revilla-Sanchez responded with a statement of type: Neutral

Hi

very nice video!

Raquel Revilla-Sanchez

Tufts University

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10/26/2008 11:57:21 PM
Kim responded with a statement of type: Question

Hi,

Thanks for the useful video. I had taken great advantage from your information.

Though, I have one question.

Sometimes, even with great caution, there comes bleeding when I take off the skull.

It occurs at the center of the craniotomy region as well as at the edge.

Can you please comment on this kind of problem?

I have put epinephrine/lidocaine solution and also saline just before taking off the skull.

Is there any delicate way to lift it up?

Thanks,

Jinho Kim

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10/27/2008 1:28:04 AM
Anonymous responded with a statement of type: Neutral

I usually drill until the skull is thin enough to be cracking.  I then wet the skull with gelfoam soaked with cortex buffer and wait a bit.   Finally I use fine forceps and try and lift off at a place with few vessels.  I push the forcep tip into the thickness of the skull and try and not go under it and then lift off. 

 

I hope this helps,

 

Peyman Golshani

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02/09/2009 1:08:20 PM
Anonymous responded with a statement of type: Question

Hi guys,

that's a really nice and clean-looking procedure. I think we will post one of these videos too.

Could you give me ordering information for Gelfoam? Do you use the powder or sponges, what's the catalog number, where do you order from and did they ever ask you for some paperwork (wholesalers told me you need a prescription)?

Thanks in advance

Bojana Gligorijevic, PhD
1-718-678-1130
Albert Einstein College of Medicine
Dept. of Anatomy and Structural Biology
Gruss-Lipper Biophotonic Center
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02/10/2009 3:05:24 PM
Tara responded with a statement of type: Neutral

Hi Bojana. Ethicon Surgifoam Absorbable Gelatin Sponge size 100 COMPRESSED (12.5cmx8cmx2mm) from Owens & Minor ~$140 Tara Spires-Jones, DPhil Instructor, Harvard Medical School MassGeneral institute for Neurodegenerative Disease 114 16th St, Charlestown, MA 02129

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02/20/2009 11:32:32 AM
jason coleman responded with a statement of type: Neutral

hi,

thank you for posting this "article"...after many different approaches, this technique has worked the best.  one comment that may be helpful to others - instead of "liquid" glue, i started using one with a thicker gel-like consistency (Loctite 454 gel; http://www.mcmelectronics.com/product/20-1515).  the gel doesn't flow at all, which helped in my situation.  i could not hold and press the window very hard during glue application because i was working in young mice with very soft skulls.  you can apply it by using a 30g needle as a 'palette knife' to build it up around the window, creating a seal.  how do you prevent the liquid glue from lurching under the window?

jason coleman

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02/24/2009 1:52:41 PM
Mostany responded with a statement of type: Neutral

Hello Jason,

 

Thanks for your suggestion about the gel-like glue. We will try it. Krazyglue also does the trick (If the tube has been open for several days, the glue gets thicker, and easier to apply)

Regarding your question, the few times I have done surgeries on young animals, I have used agarose or I have applied the glue very carefully, holding and slightly pressing the coverglass.

Ricardo

 

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02/20/2009 5:14:29 PM
cristin responded with a statement of type: Neutral

Thank you for posting the video.  I have another question to add to the forum...

Do you ever have any evidence of seizures during or following the procedure, and if not, does that indicate an obvious error I am making?

I would apprecite any input you can give me.

 

thank you,

cg

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02/24/2009 2:02:44 PM
Mostany responded with a statement of type: Neutral

Hello Cristin,

Isofluorane sometimes elicits seizures in mice (rarely). I don't know if that is the anesthetic you use.

Also, if you are pressing the brain too much (maybe because of excesive swelling), you may be stopping the blood flow in the superficial brain arteries (MCA, ACA, the main blood supplier in the cerebral cortex) and that can cause seizures.

Hope this helps

Ricardo

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02/25/2009 8:12:19 AM
MTR responded with a statement of type: Question

I have few questions regarding chronic imaging in this preparation. Window in our mice stays clear and transparent without any infection over a period months after we made them. Nonetheless,

1) The number of dendrites that can be imaged as well as image quality decreases as the time passes.

2) We need to use as much 5-10 fold higher laser power to acquire images after 2 weeks as compared to whatever power we used on day 0? After 2 weeks of window preparation it reaches a point where we need an extent of laser power that damages the brain before we can acquire some images???

3) Does repeated imaging damages the brain when powers of less then 25 mW at 925 nm used? How many imaging sessions can be done from the same window in a typical situation over a period of 30 days? What are the factors that we need to consider for a glass window preparation that gives good images over a period of month.

4) We know some wound healing process starts and covers the brain within few days of the window preparation at least in some animals. Some labs report a sucess rate of 30-50% (1 in 2 mice or 1 in 3 mice) for long term imaging. I mean the preparation staying imagebale on chronic basis over a perid of 1-2 months? What is typical success rate?

5) We do not administer dexamethasone or antibiotic to mice as we feel that may interfere with the study. Does it has some thing to do with the problem we are facing?

Any comment is appreciated. Thanks.

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03/18/2009 1:10:16 PM
jason responded with a statement of type: Neutral

one note - after almost 2 years of trying for consistently good windows, i found the pre-op administration of dexamethasone and carprofen to be crucial (in addition to following this entire protocol) for improving success rate of keeping clear windows for weeks to months (e.g. <10% success prior to use; >90% while using).  i have spoken with another 2-p expert that reports a similar experience and whom always uses dex pre-op.

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03/09/2009 9:50:09 AM
FA responded with a statement of type: Neutral

I might also suggest that if you use the acrylic without the glue, the acrylic doesn't stick very well to the skull.  It ends up being more like a motile hat that is movable than an anchored, fake skull. 

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04/16/2009 4:42:36 PM
jinglu responded with a statement of type: Neutral

Thank you for the nice video. As to the pre-op administration of the two drugs, could you tell me how long (hours, minutes or right before the surgery) you administored the drugs.

 

Thanks

 

Jinglu

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04/17/2009 11:44:48 AM
Mostany responded with a statement of type: Neutral

Hello Jinglu,

I inject the animals right before the surgery, both drugs subcutaneously. They are very important to avoid inflamation and edema, that may cause the window to become opaque. If your windows are not clear enough in a regular basis, try to inject carprofen once daily for 3-4 days. Then let the window set for a few day.

Ricardo

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04/28/2009 12:04:48 AM
Tyson responded with a statement of type: Neutral

Hi Ricardo,

 

Thank you for the fantastic video! It has been very helpful for me. I am also struggling with window-clouding issue after surgery. I recently tried administering both dexamethasone and carprofen for a one week period. The windows in all of my mice stayed beautiful while they remained on the medications. However, they all clouded within a couple of days after removing removing them from the drugs. Do you think that it is a bad idea to maintain dexamethasone past the peri-operative period?

 

I am also using both FVB/N and C57 mice. I'm getting the sense that the outcome is slightly better in the C57 mice. Do you have any experience with FVB/N strain?

 

Thank you very much for any thoughts.

 

Sincerely,

 

Tyson

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05/06/2009 3:27:07 AM
Tyson responded with a statement of type: Question

Hi Ricardo,

Thank you for the fantastic video! It has been very helpful for me. I am also struggling with a window-clouding issue after surgery. I recently tried administering both dexamethasone and carprofen for a one week period. The windows in all of my mice stayed beautiful while they remained on the medications. However, they all clouded within a couple of days after stopping the drugs. Do you think that it is a bad idea to maintain dexamethasone past the peri-operative period? Should I try to taper carprofen to avoid re-stimulating a reactive process?

I am using both FVB/N and C57 mice. I'm getting the sense that the outcomes are slightly better in the C57 mice. Do you have any experience with differences between varying strains of mice?

Thank you very much for any thoughts!

 

Sincerely, 

Tyson

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08/25/2009 7:07:53 AM
Anonymous responded with a statement of type: Question
Hi Ricardo
Thank you very much for your share.Could you tell me where can I get the titanium bar?
Thank you.
Fei Li
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08/25/2009 1:44:07 PM
Mostany responded with a statement of type: Neutral
Hello Fei,

Those titanium bars are custom made. We got them from the machine shop here at UCLA.

Ricardo
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08/31/2009 3:38:05 AM
Anonymous responded with a statement of type: Question
Hello
Recently I'm trying to do the same surgery.Thank you very much for giving such a video.But it was difficult to get the Dexamethasone and Carprofen. Could you tell me where can I get it? Thank you.
Fei li
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09/10/2009 2:15:42 AM
Mostany responded with a statement of type: Neutral
Hello Fei,
Here at UCLA we get the dexamethasone from the Hospital (our lab is part of the School of Medicine) and the carprofen from the pharmacy of the veterinary service.
Ricardo
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11/06/2009 12:38:03 PM
jdoe234 responded with a statement of type: Agree
very good
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02/15/2008

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