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Method Article

A Microfluidic System with Surface Patterning for Investigating Cavitation Bubble(s)–Cell Interaction and the Resultant Bioeffects at the Single-cell Level

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DOI:

10.3791/55106

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January 10th, 2017

In This Article

Summary

A microfluidic chip was fabricated to produce pairs of gold dots for tandem bubble generation and fibronectin-coated islands for single-cell patterning nearby. The resultant flow field was characterized by particle image velocimetry and was employed to study various bioeffects, including cell membrane poration, membrane deformation, and intracellular calcium response.

Abstract

In this manuscript, we first describe the fabrication protocol of a microfluidic chip, with gold dots and fibronectin-coated regions on the same glass substrate, that precisely controls the generation of tandem bubbles and individual cells patterned nearby with well-defined locations and shapes. We then demonstrate the generation of tandem bubbles by using two pulsed lasers illuminating a pair of gold dots with a few-microsecond time delay. We visualize the bubble-bubble interaction and jet formation by high-speed imaging and characterize the resultant flow field using particle image velocimetry (PIV). Finally, we present some applications of this technique for single cell analysis, including cell membrane poration with macromolecule uptake, localized membrane deformation determined by the displacements of attached integrin-binding beads, and intracellular calcium response from ratiometric imaging. Our results show that a fast and directional jetting flow is produced by the tandem bubble interaction, which can impose a highly localized shear stress on the surface of a cell grown in close proximity. Furthermore, different bioeffects can be induced by altering the strength of the jetting flow by adjusting the standoff distance from the cell to the tandem bubbles.

Introduction

There is a growing recognition that cellular heterogeneity, arising from the stochastic expression of genes, proteins, and metabolites, exists within a large cell population and serves as a fundamental principle in biology to allow for cell adaptation and evolution1. Therefore, it is often inaccurate and unreliable to use population-based bulk measurements to understand the function of individual cells and their interactions. Developing new technologies for single-cell analysis is therefore of high interest in biological and pharmacological research, and can be used, for example, to better understand the key signaling pathways and processes in stem cell bio....

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Protocol

1. Microfabrication

NOTE: All the microfabrication procedures are performed in a cleanroom. A chrome mask is designed prior to the microfabrication, see Figure 2.

Microfluidic device layout, flow direction diagram, fluid dynamics assessment, microarchitecture dimensions.
Figure 2: Schematic of the channel design in the microfluidic chip and the dimensions of the working units. a) Mask design of the aligned PDMS ....

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Results

The microfluidic platform described in this work can be used to investigate bubble-bubble interactions and to analyze a variety of cavitation-induced bioeffects at the single-cell level. Here, we present several examples to demonstrate a variety of experimental studies and bioassays that can be performed in our experimental system. We will first illustrate the transient interactions of tandem bubbles with the jet formation, the visualization of the resultant flow field, and the calculatio.......

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Discussion

Single-cell analysis, in combination with live-cell imaging, has greatly enhanced our understanding of the dynamic and often variable processes in individual cells, such as phenotype development and immune response23. In contrast to the conventional cell culture in dishes or flasks, microfluidic systems enable precise control of the microenvironment, down to the single-cell level, in real time. Consequently, advances in microfluidic technology and techniques have largely improved the throughput and reproducibi.......

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Disclosures

The authors have nothing to disclose.

Acknowledgements

We would like to acknowledge the use of the clean room facility SMIF at Duke University. We also want to thank Hao Qiang for his assistance in measuring the jet velocity. The authors thank Todd Rumbaugh of Hadland Imaging for providing the Shimadzu HPV-X camera used in this study.The work was funded in part by NIH through grants 5R03EB017886-02 and 4R37DK052985-20.

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Materials

List of materials used in this article
NameCompanyCatalog NumberComments
Reagent/Materials
75 mm x 38 mm Plain Microscope SlidesCorning2947-75X38
AcetoneSigma Aldrich, Co.320110ACS reagent, ≥99.5%
Isopropyl alcoholSigma Aldrich, Co.W292907≥99.7%, FCC, FG
Sulfuric acidSigma Aldrich, Co.320501ACS reagent, 95.0-98.0%
Hydrogen peroxideSigma Aldrich, Co.21676330 wt.% in H2O
Primer P-20MicrochemMCC Primer 80/20
NFR photoresistJSRNFR016D2
PhotomaskPhotoplotstoreN/A4x4 Direct write mask
MF-319 DeveloperShipley (Rohm and Haas)Microposit MF-319
1165 Photoresist RemoverDow Chemical, Co.DEM-100180731-methyl-2-pyrrolidinone based
S1813 photoresistShipley (Rohm and Haas)S1813
PLL-g-PEGSuSoSPLL(20)-g[3.5]- PEG(2)
HEPESThermoFisher Scientific15630080
Paraffin filmHACH251764
SU-2025 photoresistMicrochemSU-2025
PDMSDow Corning184 SIL ELAST KIT 0.5KG
Microbore TubingSaint-Gobain PPL Corp.S-54-HL
Metal pinsNew England Small TubeNE-1300-01Cut Tube (straight), 0.025” OD x 0.017” ID x 0.50” Long
HeLa cellsDuke Cell Culture Facility(307-CCL-2) HeLa, p.148
DPBS (1x) bufferThermoFisher Scientific14190144
DMEM culture mediumThermoFisher Scientific11995065
Fibronectin Bovine Protein, PlasmaThermoFisher Scientific33010018
0.25% Trypsin-EDTA (1x)ThermoFisher Scientific25200056
Propidium IodideThermoFisher ScientificP21493
Carboxylate Microspheres 1.00 μmPolysciences, Inc08226-15
Carboxylate Microspheres 2.00 μmPolysciences, Inc18327-10
EDC (1-ethyl-3-(3-dimethylaminopropyl)carbodiimide hydrochloride)ThermoFisher Scientific22980
Sulfo-NHSSulfo-NHS (N-hydroxysulfosuccinimide)24510
Peptite-2000Advanced BioMatrix5020-5MG
FITC Annexin VThermoFisher ScientificA13199
Fura-2, AMThermoFisher ScientificF1221
DMSOSigma Aldrich, Co.D2650
F-127invitrogenP68660.2 µm filtered (10% Solution in Water)
Reduced serum media ThermoFisher Scientific11058021
NameCompanyCatalog NumberComments
Equipment
Plasma asherEmitechK-1050XO2 / Ar plasma ashing of photoresist and other organic materials
Mask alignerSUSS MicroTec Karl Suss MA6/BA6
E-beam evaporatorCHA IndustriesCHA Industries Solution E-Beam
RIETrion Technology Trion Technology Phantom II(oxide/ nitride/ polymer) etching
StereoscopeAmScopeAmerican Scope SM-4TZ-FRLStereo Microscope
Syringe pumpChemyx IncNanoJet
Cell culture incubatorNuAireAutoFlow NU-8500 Water Jacket CO2 Incubator
Biological Safety CabinetsNuAireNU-425-400
Water bathVWR1122s
CentrifugeIECCentra CL2
MicroscopeZeissAxio Observer Z1
Nd:YAG laser  (laser 1)New Wave ResearchTempest
Nd:YAG laser  (laser 2)New Wave ResearchOrion
Delay generatorBerkeley Nucleonics BNC 565-8c
Flash lampDyna-LiteML1000 fiber-coupled flashtube
high speed cameraDRS Hadland Imacon 200
high speed  cameraShimadzuHPV-X
high speed cameraVision ResearchPhantom V7.3
PIV softwareLaVisionDaVis 7.2
cameraZeissAxioCam MRc 5
softwareZeissAxioVision
PTI systemHoribaS/N: 1705 RAM-X
EasyRatio softwareHoribaEasy Ratio Pro 2version 2.3.125.86
63× objectiveZeissLD Plan Neofluar

References

  1. Wang, D., Bodovitz, S. Single cell analysis: the new frontier in 'omics. Trends Biotechnol. 28 (6), 281-290 (2010).
  2. Weaver, W. M., et al. Advances in high-throughput single-cell microtechnologies. Curr Opin Biotechnol. 25, 114-123 (2014).
  3. Gossett,....

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Tags

Tandem BubblesSingle Cell AnalysisHigh-Speed ImagingParticle Image VelocimetryCell Membrane PorationIntracellular Calcium ResponseGold Dot Patterning