Gut Colonizing Pathogen

A gut-colonizing pathogen is a disease-causing microorganism that establishes and persists in the gastrointestinal tract, where it can disrupt host physiology and microbial communities. Colonization depends on traits such as survival in changing gut conditions, attachment to intestinal surfaces, competition for nutrients, and evasion of host defenses; infection develops when the organism damages tissue, produces toxins, or triggers harmful inflammation. Studying these pathogens helps researchers understand host-microbe interactions, disease transmission, and the balance between colonization and illness. This knowledge supports the development of diagnostics, antimicrobial strategies, vaccines, and approaches that preserve or restore the protective gut microbiota.

Gut Colonizing Pathogen - Related Videos

Research

JoVE Journal - Immunology and Infection

Automated Separation of C. elegans Variably Colonized by a Bacterial Pathogen

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Cited by 1 •

2014

The wormsorter facilitates genetic screens in Caenorhabditis elegans by sorting worms according to expression of fluorescent reporters. Here, we describe a new usage: sorting according to colonization by a GFP-expressing pathogen, and we employ it to examine the poorly understood role of pathogen recognition in initiating immune responses.

Methods for Rapid Transfer and Localization of Lyme Disease Pathogens Within the Tick Gut

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Cited by 28 •

2011

Lyme disease research studies often require generation of ticks infected with the pathogen Borrelia burgdorferi, a process that typically takes several weeks. Here we demonstrate a microinjection-based tick infection procedure that can be accomplished within hours. We also demonstrate an immunofluorescence method for in situ localization of B. burgdorferi within ticks.

In Vitro Batch-Culture Model to Mimic Colonic Fermentation by Human Gut Microbiota

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2025

Source: Ahmadi, S., et al. An In Vitro Batch-culture Model to Estimate the Effects of Interventional Regimens on Human Fecal Microbiota. J. Vis. Exp. (2019).This video demonstrates a method for modeling gut microbial fermentation by incubating fecal samples with dietary fermentable fiber under anaerobic conditions to study metabolite production by gut microbiota.

Oral Infection Alters the Gut Microbiota in a Rat Model

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2026

Begin with a rat model with sutures tied around its upper molar teeth to support bacterial colonization.Repeatedly smear the sutures with a gum disease-causing oral pathogenic bacterium using a gel-like solution.The bacteria colonize the gum around the sutures.Colonization triggers inflammation and damages the tissues.The bacteria release toxins that diffuse through damaged tissues and enter the bloodstream.These circulating toxins reach the gut, cause inflammation, disrupt the epithelial...

An Ex Vivo Gut Organ Culture System to Study Host-Microbiota Interactions

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2025

In this video, we describe the methodology for setting up an ex vivo gut organ culture system to study the interactions between mouse intestinal tissue fragments and specific gut bacteria. The device consists of two pairs of input-output ports, the first connecting the intestinal tissue lumen and supplying the specific bacterial suspension into it, and the second continuously supplying media to the device's wells to maintain ex vivo tissue viability.

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