Spatiotemporal Pattern Analysis

Spatiotemporal pattern analysis is the study of how biological features, events, or populations vary across space and change over time. It combines spatial measurements, temporal observations, and quantitative methods to identify distributions, movement, clustering, periodicity, or coordinated changes within a system. In biology, researchers use this approach to examine phenomena such as cell migration, tissue organization, species distributions, disease spread, and ecological dynamics. By linking where and when patterns occur, the method can reveal underlying processes, distinguish local variation from broader trends, and improve predictions of biological responses to environmental or experimental conditions.

Spatiotemporal Pattern Analysis - Related Videos

Research

JoVE Journal - Biology

Spatiotemporal Analysis of Cytokinetic Events in Fission Yeast

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Cited by 6 •

2017

The fission yeast, Schizosaccharomyces pombe is an excellent model system to study cytokinesis, the final stage in cell division. Here we describe a microscopy approach to analyze different cytokinetic events in live fission yeast cells.

Research

JoVE Journal - Biology
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Spatiotemporal Mapping of Motility in Ex Vivo Preparations of the Intestines

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Cited by 26 •

2016

Recently available video recording and spatiotemporal mapping (STmap) techniques make it possible to visualize and quantify both propagating and mixing patterns of intestinal motility. The goal of this protocol is to explain the generation and analysis of STmaps using the GastroIntestinal Motility Monitoring (GIMM) system.

Research

JoVE Journal - Neuroscience
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Cross-Modal Multivariate Pattern Analysis

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Cited by 5 •

2011

Classical multivariate pattern analysis predicts sensory stimuli a subject perceives from neural activity in the corresponding cortices (e.g. visual stimuli from activity in visual cortex). Here, we apply pattern analysis cross-modally and show that sound- and touch-implying visual stimuli can be predicted from activity in auditory and somatosensory cortices, respectively.

Education

JoVE Science Education - Psychology

Decoding Auditory Imagery with Multivoxel Pattern Analysis

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2023

Source: Laboratories of Jonas T. Kaplan and Sarah I. Gimbel—University of Southern California Imagine the sound of a bell ringing. What is happening in the brain when we conjure up a sound like this in the "mind's ear?" There is growing evidence that the brain uses the same mechanisms for imagination that it uses for perception.1 For example, when imagining visual images, the visual cortex becomes activated, and when imagining sounds, the auditory cortex is engaged. However, to what extent are...

Detection of Architectural Distortion in Prior Mammograms via Analysis of Oriented Patterns

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Cited by 13 •

2013

We demonstrate methods for the detection of architectural distortion in prior mammograms. Oriented structures are analyzed using Gabor filters and phase portraits to detect sites of radiating tissue patterns. Each site is characterized and classified using measures to represent spiculating patterns. The methods should assist in the detection of breast cancer.

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