B. M. Salzberg

Department of Neuroscience, University of Pennsylvania-School of Medicine

Affiliated withUniversity of Pennsylvania-School of Medicine

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JoVE Journal Publications

ArticleTotal : 1	Year
Publication title Cited by 10	2009

Other Publications

Article	Year
Lymphoblastic leukemia/lymphoma in mice overexpressing the Mer (MerTK) receptor tyrosine kinase. Oncogene\| PubMed ID: 16652142	2006
Ectopic expression of the proto-oncogene Mer in pediatric T-cell acute lymphoblastic leukemia. Clinical cancer research : an official journal of the American Association for Cancer Research\| PubMed ID: 16675557	2006
Serious infections and mortality in association with therapies for Crohn's disease: TREAT registry. Clinical gastroenterology and hepatology : the official clinical practice journal of the American Gastroenterological Association\| PubMed ID: 16678077	2006
Left ventricular false aneurysm following percutaneus balloon aortic valvuloplasty: magnetic resonance imaging as diagnostic tool. European journal of cardio-thoracic surgery : official journal of the European Association for Cardio-thoracic Surgery\| PubMed ID: 16730187	2006
A three-dimensional ring annuloplasty for the treatment of tricuspid regurgitation. The Annals of thoracic surgery\| PubMed ID: 16731167	2006
A graph-based reflexive artificial chemistry. Bio Systems\| PubMed ID: 16733079	2007
C-reactive protein levels in patients with aggressive periodontitis. Journal of periodontology\| PubMed ID: 16734565	2006
It is time to end the patenting of software. Bioinformatics (Oxford, England)\| PubMed ID: 16766564	2006
Outcomes and predictors of success of a radiofrequency- or cryothermy-simplified left-sided maze procedure in patients undergoing mitral valve surgery. The Journal of heart valve disease\| PubMed ID: 16784073	2006
Nonexpansive immediate breast reconstruction using human acellular tissue matrix graft (AlloDerm). Annals of plastic surgery\| PubMed ID: 16799299	2006
Increased neointimal formation after surgical vein grafting in a murine model of type 2 diabetes. Circulation\| PubMed ID: 16820590	2006
Mitral valve repair with Carpentier-McCarthy-Adams IMR ETlogix annuloplasty ring for ischemic mitral regurgitation: early echocardiographic results from a multi-center study. Circulation\| PubMed ID: 16820643	2006
Excellent outcomes of cardiac surgery in patients infected with HIV in the current era. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America\| PubMed ID: 16838245	2006
Nano- and microparticles as adjuvants in vaccine design: success and failure is related to host natural antibodies. Vaccine\| PubMed ID: 16842893	2006
Sixty-four-slice computed tomographic coronary angiography in pseudoaneurysm of the ascending aorta: a useful modality to supplement the diagnosis. The Journal of thoracic and cardiovascular surgery\| PubMed ID: 16872935	2006
JIGSAW, GeneZilla, and GlimmerHMM: puzzling out the features of human genes in the ENCODE regions. Genome biology\| PubMed ID: 16925843	2006
Macronuclear genome sequence of the ciliate Tetrahymena thermophila, a model eukaryote. PLoS biology\| PubMed ID: 16933976	2006
A phylogenetic generalized hidden Markov model for predicting alternatively spliced exons. Algorithms for molecular biology : AMB\| PubMed ID: 16934144	2006
Trastuzumab (Herceptin) in patients with HER-2-overexpressing metastatic or locally advanced transitional cell carcinoma of the bladder: report on 7 patients. European journal of cancer (Oxford, England : 1990)\| PubMed ID: 16934972	2006
Celecoxib for the prevention of sporadic colorectal adenomas. The New England journal of medicine\| PubMed ID: 16943400	2006
From machine and tape to structure and function: formulation of a reflexively computing system. Artificial life\| PubMed ID: 16953782	2006
How fast does an atrial myxoma grow? The Annals of thoracic surgery\| PubMed ID: 16996968	2006
A second look at the Palmes' diffusive sampler. Journal of the Air & Waste Management Association (1995)\| PubMed ID: 17063865	2006
Surgical management of functional tricuspid regurgitation with a new remodeling annuloplasty ring. The Mount Sinai journal of medicine, New York\| PubMed ID: 17117314	2006
Structure-based identification of small molecule binding sites using a free energy model. Journal of chemical information and modeling\| PubMed ID: 17125203	2006
Large annuloplasty rings facilitate mitral valve repair in Barlow's disease. The Annals of thoracic surgery\| PubMed ID: 17126117	2006
Depression in temporal lobe epilepsy surgery patients: an FDG-PET study. Epilepsia\| PubMed ID: 17201712	2006
Structure-based maximal affinity model predicts small-molecule druggability. Nature biotechnology\| PubMed ID: 17211405	2007
Draft genome sequence of the sexually transmitted pathogen Trichomonas vaginalis. Science (New York, N.Y.)\| PubMed ID: 17218520	2007
Automatic image segmentation with linear clustering for quantification of neointimal formation after surgical vein grafting. Analytical and quantitative cytology and histology / the International Academy of Cytology [and] American Society of Cytology\| PubMed ID: 17220144	2006
Identifying bacterial genes and endosymbiont DNA with Glimmer. Bioinformatics (Oxford, England)\| PubMed ID: 17237039	2007
Genome re-annotation: a wiki solution? Genome biology\| PubMed ID: 17274839	2007
Computed tomography angiography is an excellent tool for the diagnosis of congenital coronary artery anomalies: a report of 2 cases. The heart surgery forum\| PubMed ID: 17284399	2007
Multimodal characterization of a large right atrial mass after surgical repair of an atrial septal defect. The Mount Sinai journal of medicine, New York\| PubMed ID: 17285207	2006
A mechanical spike accompanies the action potential in Mammalian nerve terminals. Biophysical journal\| PubMed ID: 17307820	2007
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake. Genome biology\| PubMed ID: 17313685	2007
Minimus: a fast, lightweight genome assembler. BMC bioinformatics\| PubMed ID: 17324286	2007
Hawkeye: an interactive visual analytics tool for genome assemblies. Genome biology\| PubMed ID: 17349036	2007
Early and late outcome of cardiac surgery in patients with liver cirrhosis. Liver transplantation : official publication of the American Association for the Study of Liver Diseases and the International Liver Transplantation Society\| PubMed ID: 17427174	2007
The effect and safety of short-term creatine supplementation on performance of push-ups. Military medicine\| PubMed ID: 17436778	2007
Survival without common toxicity criteria grade 3/4 toxicity for pemetrexed compared with docetaxel in previously treated patients with advanced non-small cell lung cancer (NSCLC): a risk-be... Journal of thoracic oncology : official publication of the International Association for the Study of Lung Cancer\| PubMed ID: 17473654	2007
An antibiotic-inducible cell wall-associated protein that protects Bacillus subtilis from autolysis. Journal of bacteriology\| PubMed ID: 17483219	2007
Genome sequence of Aedes aegypti, a major arbovirus vector. Science (New York, N.Y.)\| PubMed ID: 17510324	2007
Comprehensive DNA signature discovery and validation. PLoS computational biology\| PubMed ID: 17511514	2007
A computational survey of candidate exonic splicing enhancer motifs in the model plant Arabidopsis thaliana. BMC bioinformatics\| PubMed ID: 17517127	2007
Alternating electric fields arrest cell proliferation in animal tumor models and human brain tumors. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 17551011	2007
Genome analysis linking recent European and African influenza (H5N1) viruses. Emerging infectious diseases\| PubMed ID: 17553249	2007
An open-label, noncomparative phase II trial to evaluate the efficacy and safety of docetaxel in combination with gefitinib in patients with hormone-refractory metastatic prostate cancer. Onkologie\| PubMed ID: 17596743	2007
COX-2 inhibitors and cardiovascular risk. Sub-cellular biochemistry\| PubMed ID: 17612050	2007
The acceleration of amygdala kindling epileptogenesis by chronic low-dose corticosterone involves both mineralocorticoid and glucocorticoid receptors. Psychoneuroendocrinology\| PubMed ID: 17614213	2007
A unified model explaining the offsets of overlapping and near-overlapping prokaryotic genes. Molecular biology and evolution\| PubMed ID: 17642473	2007
Additional sex combs affects antennal development by means of spatially restricted repression of Antp and wg. Developmental dynamics : an official publication of the American Association of Anatomists\| PubMed ID: 17654717	2007
Draft genome of the filarial nematode parasite Brugia malayi. Science (New York, N.Y.)\| PubMed ID: 17885136	2007
A phase I study of visilizumab, a humanized anti-CD3 monoclonal antibody, in severe steroid-refractory ulcerative colitis. Gastroenterology\| PubMed ID: 17920064	2007
Epidemiology of stroke after cardiac surgery in the current era. The Journal of thoracic and cardiovascular surgery\| PubMed ID: 17976438	2007
Evolution of genes and genomes on the Drosophila phylogeny. Nature\| PubMed ID: 17994087	2007
Early postnatal stress confers enduring vulnerability to limbic epileptogenesis. Epilepsia\| PubMed ID: 17999745	2007
An open-label, multicenter study of outpatient capecitabine monotherapy in 631 patients with pretreated advanced breast cancer. Oncology\| PubMed ID: 18004077	2007
Elevated anxiety and depressive-like behavior in a rat model of genetic generalized epilepsy suggesting common causation. Experimental neurology\| PubMed ID: 18022621	2008
The neurologist, psychogenic nonepileptic seizures, and borderline personality disorder. Epilepsy & behavior : E&B\| PubMed ID: 18054130	2007
Pegylated liposomal doxorubicin (caelyx) in metastatic breast cancer: a community-based observation study. Oncology\| PubMed ID: 18087175	2007
Lung Cancer Symptom Scale outcomes in relation to standard efficacy measures: an analysis of the phase III study of pemetrexed versus docetaxel in advanced non-small cell lung cancer. Journal of thoracic oncology : official publication of the International Association for the Study of Lung Cancer\| PubMed ID: 18166838	2008
Two-photon excitation of potentiometric probes enables optical recording of action potentials from mammalian nerve terminals in situ. Journal of neurophysiology\| PubMed ID: 18171710	2008
Human K10 epithelial keratin is the most abundant protein in airborne dust of both occupied and unoccupied school rooms. Journal of environmental monitoring : JEM\| PubMed ID: 18175017	2008
Is RAS blockade routinely indicated in hypertensive kidney transplant patients? Current hypertension reports\| PubMed ID: 18177591	2007
Automated eukaryotic gene structure annotation using EVidenceModeler and the Program to Assemble Spliced Alignments. Genome biology\| PubMed ID: 18190707	2008
Bioinformatics challenges of new sequencing technology. Trends in genetics : TIG\| PubMed ID: 18262676	2008
Using MUMmer to identify similar regions in large sequence sets. Current protocols in bioinformatics / editoral board, Andreas D. Baxevanis ... [et al.]\| PubMed ID: 18428693	2003
The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus). Nature\| PubMed ID: 18432245	2008
Genome sequence and rapid evolution of the rice pathogen Xanthomonas oryzae pv. oryzae PXO99A. BMC genomics\| PubMed ID: 18452608	2008
The effect of calcium intake and physical activity on bone quantitative ultrasound measurements in children: a pilot study. Journal of bone and mineral metabolism\| PubMed ID: 18470665	2008
Chromosomal binding sites of the homeotic cofactor Homothorax. Molecular genetics and genomics : MGG\| PubMed ID: 18481089	2008
Neuropsychiatric morbidity in focal epilepsy. The British journal of psychiatry : the journal of mental science\| PubMed ID: 18515901	2008
Subcutaneous mastectomy and immediate reconstruction for prevention of breast cancer for high-risk patients. Breast cancer (Tokyo, Japan)\| PubMed ID: 18575951	2008
A pilot study with very low-intensity, intermediate-frequency electric fields in patients with locally advanced and/or metastatic solid tumors. Onkologie\| PubMed ID: 18596382	2008
The contents of the syringe. Nature\| PubMed ID: 18615063	2008
Surgical treatment of atrial fibrillation using cryothermy in patients undergoing mitral valve surgery. Interactive cardiovascular and thoracic surgery\| PubMed ID: 18628344	2008
Surgical left atrial appendage occlusion: evaluation of a novel device with magnetic resonance imaging. European journal of cardio-thoracic surgery : official journal of the European Association for Cardio-thoracic Surgery\| PubMed ID: 18693117	2008
Renal consequences of prostaglandin inhibition in heart failure. Heart failure clinics\| PubMed ID: 18760760	2008
Use of lipoteichoic acid-T for pleurodesis in malignant pleural effusion: a phase I toxicity and dose-escalation study. The lancet oncology\| PubMed ID: 18775668	2008
What are decision trees? Nature biotechnology\| PubMed ID: 18779814	2008
Using GlimmerM to find genes in eukaryotic genomes. Current protocols in bioinformatics / editoral board, Andreas D. Baxevanis ... [et al.]\| PubMed ID: 18792941	2002
B-type natriuretic peptide (BNP) in patients undergoing mitral valve surgery. Journal of cardiac surgery\| PubMed ID: 18793229	2008
Gene-boosted assembly of a novel bacterial genome from very short reads. PLoS computational biology\| PubMed ID: 18818729	2008
Phenotypic and transcriptomic characterization of Bacillus subtilis mutants with grossly altered membrane composition. Journal of bacteriology\| PubMed ID: 18820022	2008
Comparative genomics of the neglected human malaria parasite Plasmodium vivax. Nature\| PubMed ID: 18843361	2008
Re-assembly of the genome of Francisella tularensis subsp. holarctica OSU18. PloS one\| PubMed ID: 18927608	2008
OperonDB: a comprehensive database of predicted operons in microbial genomes. Nucleic acids research\| PubMed ID: 18948284	2009
The complete genome sequence of Bacillus anthracis Ames "Ancestor". Journal of bacteriology\| PubMed ID: 18952800	2009
Evaluation of a high visibility enforcement project focused on passenger vehicles interacting with commercial vehicles. Journal of safety research\| PubMed ID: 19010119	2008
Acquisition and evolution of plant pathogenesis-associated gene clusters and candidate determinants of tissue-specificity in xanthomonas. PloS one\| PubMed ID: 19043590	2008
Experimental traumatic brain injury induces a pervasive hyperanxious phenotype in rats. Journal of neurotrauma\| PubMed ID: 19061380	2008
Genome sequence of the Wolbachia endosymbiont of Culex quinquefasciatus JHB. Journal of bacteriology\| PubMed ID: 19114486	2009
Obsessive-compulsive disorder with mitochondrial disease. Psychosomatics\| PubMed ID: 19122133	2008
Morphometric abnormalities and hyperanxiety in genetically epileptic rats: a model of psychiatric comorbidity? NeuroImage\| PubMed ID: 19167503	2009
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome biology\| PubMed ID: 19261174	2009
TopHat: discovering splice junctions with RNA-Seq. Bioinformatics (Oxford, England)\| PubMed ID: 19289445	2009
Five-year efficacy and safety analysis of the Adenoma Prevention with Celecoxib Trial. Cancer prevention research (Philadelphia, Pa.)\| PubMed ID: 19336730	2009
A whole-genome assembly of the domestic cow, Bos taurus. Genome biology\| PubMed ID: 19393038	2009
Anxiolytic effects of rapid amygdala kindling, and the influence of early life experience in rats. Behavioural brain research\| PubMed ID: 19397932	2009
Insignia: a DNA signature search web server for diagnostic assay development. Nucleic acids research\| PubMed ID: 19417071	2009
How to map billions of short reads onto genomes. Nature biotechnology\| PubMed ID: 19430453	2009
Response to "The guideline 'consultation psychiatry' of the Netherlands Psychiatric Association". Journal of psychosomatic research\| PubMed ID: 19446713	2009
Psychiatric comorbidity and impact on health service utilization in a community sample of patients with epilepsy. Epilepsia\| PubMed ID: 19490049	2009
Aortic valve vegetation without endocarditis. The Annals of thoracic surgery\| PubMed ID: 19559240	2009
The genome of the blood fluke Schistosoma mansoni. Nature\| PubMed ID: 19606141	2009
Open access: the sooner the better. Science (New York, N.Y.)\| PubMed ID: 19608896	2009
2009 Swine-origin influenza A (H1N1) resembles previous influenza isolates. PloS one\| PubMed ID: 19636415	2009
The effects of overfeeding on the neuronal response to visual food cues in thin and reduced-obese individuals. PloS one\| PubMed ID: 19636426	2009
Phymm and PhymmBL: metagenomic phylogenetic classification with interpolated Markov models. Nature methods\| PubMed ID: 19648916	2009
Impact of preoperative nesiritide on renal function after mitral valve surgery. The heart surgery forum\| PubMed ID: 19683992	2009
NMDA receptor hypofunction leads to generalized and persistent aberrant gamma oscillations independent of hyperlocomotion and the state of consciousness. PloS one\| PubMed ID: 19707548	2009
"When Aneurysm Ain't Aneurysm": sinus of Valsalva aneurysm mimicked by healed abscess cavity under the aortic valve. The Thoracic and cardiovascular surgeon\| PubMed ID: 19707982	2009
Prospective randomized open-label multicenter phase I/II dose escalation trial of visilizumab (HuM291) in severe steroid-refractory ulcerative colitis. Inflammatory bowel diseases\| PubMed ID: 19714757	2010
Efficient oligonucleotide probe selection for pan-genomic tiling arrays. BMC bioinformatics\| PubMed ID: 19758451	2009
Risks of complications by attending physicians after performing nighttime procedures. JAMA : the journal of the American Medical Association\| PubMed ID: 19826026	2009
Early life stress as an influence on limbic epilepsy: an hypothesis whose time has come? Frontiers in behavioral neuroscience\| PubMed ID: 19838325	2009
Severe cardiomyopathy following treatment with the tumour necrosis factor-alpha inhibitor adalimumab for Crohn's disease. European journal of heart failure\| PubMed ID: 19875411	2009
Left atrial appendage clip occlusion: early clinical results. The Journal of thoracic and cardiovascular surgery\| PubMed ID: 19880144	2010
Searching for SNPs with cloud computing. Genome biology\| PubMed ID: 19930550	2009
The proprioceptive and contractile systems in Drosophila are both patterned by the EGR family transcription factor Stripe. Developmental biology\| PubMed ID: 19944090	2010
Meig1 deficiency causes a severe defect in mouse spermatogenesis. Developmental biology\| PubMed ID: 20004656	2010
Medication errors recovered by emergency department pharmacists. Annals of emergency medicine\| PubMed ID: 20005011	2010
Despite modern off-pump coronary artery bypass grafting women fare worse than men. Interactive cardiovascular and thoracic surgery\| PubMed ID: 20051452	2010
Peptidoglycan metabolism is controlled by the WalRK (YycFG) and PhoPR two-component systems in phosphate limited Bacillus subtilis cells. Molecular microbiology\| PubMed ID: 20059685	2010
Sex-based differences in the behavioral and neuronal responses to food. Physiology & behavior\| PubMed ID: 20096712	2010
Mind the gaps. Nature methods\| PubMed ID: 20111034	2010
A genetic epilepsy rat model displays endophenotypes of psychosis. Neurobiology of disease\| PubMed ID: 20153428	2010
Detection and correction of false segmental duplications caused by genome mis-assembly. Genome biology\| PubMed ID: 20219098	2010
Classification of alcohol abuse by plasma protein biomarkers. Biological psychiatry\| PubMed ID: 20299005	2010
Routine off-pump coronary artery bypass grafting is safe and feasible in high-risk patients with left main disease. The Annals of thoracic surgery\| PubMed ID: 20338319	2010
MALDI-TOF mass spectrometry speciation of staphylococci and their discrimination from micrococci isolated from indoor air of schoolrooms. Journal of environmental monitoring : JEM\| PubMed ID: 20383373	2010
Inhibition of Mer and Axl receptor tyrosine kinases in astrocytoma cells leads to increased apoptosis and improved chemosensitivity. Molecular cancer therapeutics\| PubMed ID: 20423999	2010
Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation. Nature biotechnology\| PubMed ID: 20436464	2010
Between a chicken and a grape: estimating the number of human genes. Genome biology\| PubMed ID: 20441615	2010
Peptidoglycan metabolism is controlled by the WalRK (YycFG) and PhoPR two-component systems in phosphate-limited Bacillus subtilis cells. Molecular microbiology\| PubMed ID: 20487291	2010
Assembly of large genomes using second-generation sequencing. Genome research\| PubMed ID: 20508146	2010
The effects of video modeling on staff implementation of a problem-solving intervention with adults with developmental disabilities. Journal of applied behavior analysis\| PubMed ID: 20514193	2009
Survival after acute and complete occlusion of left main stem. Asian cardiovascular & thoracic annals\| PubMed ID: 20519308	2010
Long-lasting intrinsic optical changes observed in the neurointermediate lobe of the mouse pituitary reflect volume changes in cells of the pars intermedia. Neuroendocrinology\| PubMed ID: 20551618	2010
Real life cardio-thoracic surgery training in Europe: facing the facts. Interactive cardiovascular and thoracic surgery\| PubMed ID: 20554650	2010
Cloud computing and the DNA data race. Nature biotechnology\| PubMed ID: 20622843	2010
Analysis of Carica papaya Telomeres and Telomere-Associated Proteins: Insights into the Evolution of Telomere Maintenance in Brassicales. Tropical plant biology\| PubMed ID: 20664721	2008
How good patient blood management leads to excellent outcomes in Jehovah's witness patients undergoing cardiac surgery. Interactive cardiovascular and thoracic surgery\| PubMed ID: 20829389	2011
Genome sequence of the dioxin-mineralizing bacterium Sphingomonas wittichii RW1. Journal of bacteriology\| PubMed ID: 20833805	2010
Neuropsychiatric symptomatology predicts seizure recurrence in newly treated patients. Neurology\| PubMed ID: 20837970	2010
Multi-platform next-generation sequencing of the domestic turkey (Meleagris gallopavo): genome assembly and analysis. PLoS biology\| PubMed ID: 20838655	2010
Probing the pan-genome of Listeria monocytogenes: new insights into intraspecific niche expansion and genomic diversification. BMC genomics\| PubMed ID: 20846431	2010
Do-it-yourself genetic testing. Genome biology\| PubMed ID: 20932271	2010
Clustering metagenomic sequences with interpolated Markov models. BMC bioinformatics\| PubMed ID: 21044341	2010
COMBREX: a project to accelerate the functional annotation of prokaryotic genomes. Nucleic acids research\| PubMed ID: 21097892	2011
Quake: quality-aware detection and correction of sequencing errors. Genome biology\| PubMed ID: 21114842	2010
Mugsy: fast multiple alignment of closely related whole genomes. Bioinformatics (Oxford, England)\| PubMed ID: 21148543	2011
Electrophysiological insights into the enduring effects of early life stress on the brain. Psychopharmacology\| PubMed ID: 21165736	2011
Is off-pump superior to conventional coronary artery bypass grafting in diabetic patients with multivessel disease? European journal of cardio-thoracic surgery : official journal of the European Association for Cardio-thoracic Surgery\| PubMed ID: 21167727	2011
Recent advances in RNA sequence analysis. F1000 biology reports\| PubMed ID: 21173855	2010
The genome of woodland strawberry (Fragaria vesca). Nature genetics\| PubMed ID: 21186353	2011
[Renaissance of surgery for coronary artery disease]. Praxis\| PubMed ID: 21210357	2011
Spatial regulation of cell adhesion in the Drosophila wing is mediated by Delilah, a potent activator of Î²PS integrin expression. Developmental biology\| PubMed ID: 21215259	2011
Sternal plate closure: indications, surgical procedure and follow-up. The Thoracic and cardiovascular surgeon\| PubMed ID: 21243569	2011
An 8-year experience of direct-to-implant immediate breast reconstruction using human acellular dermal matrix (AlloDerm). Plastic and reconstructive surgery\| PubMed ID: 21285756	2011
A qualitative study of Canada's experience with the implementation of electronic health information technology. CMAJ : Canadian Medical Association journal = journal de l'Association medicale canadienne\| PubMed ID: 21343262	2011
Bacillus anthracis comparative genome analysis in support of the Amerithrax investigation. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 21383169	2011
Closure of the NCBI SRA and implications for the long-term future of genomics data storage. Genome biology\| PubMed ID: 21418618	2011
Deriving realistic source boundary conditions for a CFD simulation of concentrations in workroom air. The Annals of occupational hygiene\| PubMed ID: 21422277	2011
PhymmBL expanded: confidence scores, custom databases, parallelization and more. Nature methods\| PubMed ID: 21527926	2011
Care transitions as opportunities for clinicians to use data exchange services: how often do they occur? Journal of the American Medical Informatics Association : JAMIA\| PubMed ID: 21531703	2011
Off-pump surgery for the poor ventricle? Heart and vessels\| PubMed ID: 21584751	2011
Complete Columbian mammoth mitogenome suggests interbreeding with woolly mammoths. Genome biology\| PubMed ID: 21627792	2011
Cell envelope gene expression in phosphate-limited Bacillus subtilis cells. Microbiology (Reading, England)\| PubMed ID: 21636651	2011
Service use in consultation-liaison psychiatry: guidelines for baseline staffing. Australasian psychiatry : bulletin of Royal Australian and New Zealand College of Psychiatrists\| PubMed ID: 21682625	2011
Aortic no-touch technique makes the difference in off-pump coronary artery bypass grafting. The Journal of thoracic and cardiovascular surgery\| PubMed ID: 21683376	2011
Errors associated with outpatient computerized prescribing systems. Journal of the American Medical Informatics Association : JAMIA\| PubMed ID: 21715428	2011
Improving pan-genome annotation using whole genome multiple alignment. BMC bioinformatics\| PubMed ID: 21718539	2011
Detection of lineage-specific evolutionary changes among primate species. BMC bioinformatics\| PubMed ID: 21726447	2011
Genome assembly has a major impact on gene content: a comparison of annotation in two Bos taurus assemblies. PloS one\| PubMed ID: 21731731	2011
Acute administration of typical and atypical antipsychotics reduces EEG gamma power, but only the preclinical compound LY379268 reduces the ketamine-induced rise in gamma power. The international journal of neuropsychopharmacology / official scientific journal of the Collegium Internationale Neuropsychopharmacologicum (CINP)\| PubMed ID: 21733235	2011
Improved diagnostic and prognostic performance of a new high-sensitive troponin T assay in patients with acute coronary syndrome. American heart journal\| PubMed ID: 21742093	2011
Lessons from the Canadian national health information technology plan for the United States: opinions of key Canadian experts. Journal of the American Medical Informatics Association : JAMIA\| PubMed ID: 21764888	2011
Two new complete genome sequences offer insight into host and tissue specificity of plant pathogenic Xanthomonas spp. Journal of bacteriology\| PubMed ID: 21784931	2011
TopHat-Fusion: an algorithm for discovery of novel fusion transcripts. Genome biology\| PubMed ID: 21835007	2011
A systematic review: plyometric training programs for young children. Journal of strength and conditioning research / National Strength & Conditioning Association\| PubMed ID: 21849911	2011
The Bacillus subtilis GntR family repressor YtrA responds to cell wall antibiotics. Journal of bacteriology\| PubMed ID: 21856850	2011
FLASH: fast length adjustment of short reads to improve genome assemblies. Bioinformatics (Oxford, England)\| PubMed ID: 21903629	2011
Management of hypertension in the transplant patient. Journal of the American Society of Hypertension : JASH\| PubMed ID: 21925458	2011
In patients hospitalised with acute heart failure, nesiritide, compared with placebo, is not associated with improvements in dyspnoea or 30-day rehospitalisation or mortality. Evidence-based medicine\| PubMed ID: 21949253	2011
Uncovering the blind spot of patient satisfaction: an international survey. BMJ quality & safety\| PubMed ID: 21949436	2011
Early life stress enhancement of limbic epileptogenesis in adult rats: mechanistic insights. PloS one\| PubMed ID: 21957442	2011
A multicenter retrospective experience of infliximab in Crohn's disease patients: infusion reaction rates and treatment persistency. Gastroenterology & hepatology\| PubMed ID: 21960854	2007
Off-pump surgery is not a contraindication for patients with a severely decreased ejection fraction. The heart surgery forum\| PubMed ID: 21997652	2011
Gene prediction with Glimmer for metagenomic sequences augmented by classification and clustering. Nucleic acids research\| PubMed ID: 22102569	2012
Repetitive DNA and next-generation sequencing: computational challenges and solutions. Nature reviews. Genetics\| PubMed ID: 22124482	2012
GAGE: A critical evaluation of genome assemblies and assembly algorithms. Genome research\| PubMed ID: 22147368	2012
The effects of exercise on the neuronal response to food cues. Physiology & behavior\| PubMed ID: 22155218	2012
MiR-365 regulates lung cancer and developmental gene thyroid transcription factor 1. Cell cycle (Georgetown, Tex.)\| PubMed ID: 22185756	2012
Hawkeye and AMOS: visualizing and assessing the quality of genome assemblies. Briefings in bioinformatics\| PubMed ID: 22199379	2011
Total arterial off-pump surgery provides excellent outcomes and does not compromise complete revascularization. European journal of cardio-thoracic surgery : official journal of the European Association for Cardio-thoracic Surgery\| PubMed ID: 22241007	2012
Clinical outcomes associated with screening and referral for depression in an acute cardiac ward. Journal of clinical nursing\| PubMed ID: 22268823	2012
Negative microbiological results are not mandatory in deep sternal wound infections before wound closure. European journal of cardio-thoracic surgery : official journal of the European Association for Cardio-thoracic Surgery\| PubMed ID: 22290924	2012