M. Mallar Chakravarty

Institute of Biomaterials and Biomedical Engineering, University of Toronto

Affiliated withUniversity of Toronto McGill University

Research Area

Biography

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JoVE Journal Publications

ArticleTotal : 1	Year
Publication title Cited by 9	2015

Other Publications

Article	Year
The creation of a brain atlas for image guided neurosurgery using serial histological data. NeuroImage\| PubMed ID: 16406816	2006
Anatomical and electrophysiological validation of an atlas for neurosurgical planning. Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention\| PubMed ID: 16685984	2005
Towards a multi-modal atlas for neurosurgical planning. Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention\| PubMed ID: 17354796	2006
Fronto-striatal connections in the human brain: a probabilistic diffusion tractography study. Neuroscience letters\| PubMed ID: 17485168	2007
The connectivity of the human pulvinar: a diffusion tensor imaging tractography study. International journal of biomedical imaging\| PubMed ID: 18274667	2008
Robust S1, S2, and thalamic activations in individual subjects with vibrotactile stimulation at 1.5 and 3.0 T. Human brain mapping\| PubMed ID: 18537113	2009
Synergistic tissue counterstaining and image segmentation techniques for accurate, quantitative immunohistochemistry. The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society\| PubMed ID: 18574255	2008
Towards a validation of atlas warping techniques. Medical image analysis\| PubMed ID: 18640867	2008
Comparison of piece-wise linear, linear, and nonlinear atlas-to-patient warping techniques: analysis of the labeling of subcortical nuclei for functional neurosurgical applications. Human brain mapping\| PubMed ID: 19387981	2009
Design, construction, and validation of an MRI-compatible vibrotactile stimulator intended for clinical use. Journal of neuroscience methods\| PubMed ID: 19631690	2009
Musical morphology. Annals of the New York Academy of Sciences\| PubMed ID: 19673757	2009
New surgical technique reduces the susceptibility artefact at air-tissue interfaces on in vivo cerebral MRI in the Göttingen minipig. Brain research bulletin\| PubMed ID: 19712728	2009
Neurite density from magnetic resonance diffusion measurements at ultrahigh field: comparison with light microscopy and electron microscopy. NeuroImage\| PubMed ID: 19732836	2010
Areal and laminar differentiation in the mouse neocortex using large scale gene expression data. Methods (San Diego, Calif.)\| PubMed ID: 19800006	2010
Surface-based mapping of gene expression and probabilistic expression maps in the mouse cortex. Methods (San Diego, Calif.)\| PubMed ID: 19818854	2010
Morphological abnormalities of the thalamus in youths with attention deficit hyperactivity disorder. The American journal of psychiatry\| PubMed ID: 20123910	2010
Defining the intercommissural plane and stereotactic coordinates for the Basal Ganglia in the Göttingen minipig brain. Stereotactic and functional neurosurgery\| PubMed ID: 20357521	2010
Enlargement of thalamic nuclei in Tourette syndrome. Archives of general psychiatry\| PubMed ID: 20819989	2010
Depression severity is correlated to the integrity of white matter fiber tracts in late-onset major depression. Psychiatry research\| PubMed ID: 20832255	2010
Electroconvulsive therapy alters dopamine signaling in the striatum of non-human primates. Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology\| PubMed ID: 20944554	2011
An MRI based average macaque monkey stereotaxic atlas and space (MNI monkey space). NeuroImage\| PubMed ID: 21256229	2011
Automated analysis of craniofacial morphology using magnetic resonance images. PloS one\| PubMed ID: 21655288	2011
Creation of Computerized 3D MRI-Integrated Atlases of the Human Basal Ganglia and Thalamus. Frontiers in systems neuroscience\| PubMed ID: 21922002	2011
Testosterone-mediated sex differences in the face shape during adolescence: subjective impressions and objective features. Hormones and behavior\| PubMed ID: 21983236	2011
KCTD8 gene and brain growth in adverse intrauterine environment: a genome-wide association study. Cerebral cortex (New York, N.Y. : 1991)\| PubMed ID: 22156575	2012
Frontotemporoparietal asymmetry and lack of illness awareness in schizophrenia. Human brain mapping\| PubMed ID: 22213454	2013
Brain energy metabolism and blood flow differences in healthy aging. Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism\| PubMed ID: 22373642	2012
Identification of common variants associated with human hippocampal and intracranial volumes. Nature genetics\| PubMed ID: 22504417	2012
Performing label-fusion-based segmentation using multiple automatically generated templates. Human brain mapping\| PubMed ID: 22611030	2013
Correlations between Stroop task performance and white matter lesion measures in late-onset major depression. Psychiatry research\| PubMed ID: 22703621	2012
Assessing the risk of central post-stroke pain of thalamic origin by lesion mapping. Brain : a journal of neurology\| PubMed ID: 22719000	2012
DISC1 and Striatal Volume: A Potential Risk Phenotype For mental Illness. Frontiers in psychiatry\| PubMed ID: 22723785	2012
Oligodendrocyte Genes, White Matter Tract Integrity, and Cognition in Schizophrenia. Cerebral cortex (New York, N.Y. : 1991)\| PubMed ID: 22772651	2012
An anatomically comprehensive atlas of the adult human brain transcriptome. Nature\| PubMed ID: 22996553	2012
A genome-wide association study identifies five loci influencing facial morphology in Europeans. PLoS genetics\| PubMed ID: 23028347	2012
FTO, obesity and the adolescent brain. Human molecular genetics\| PubMed ID: 23201753	2013
Multimodal imaging and image analysis techniques for neuromodulation. International review of neurobiology\| PubMed ID: 23206685	2012
Adolescent cocaine exposure causes enduring macroscale changes in mouse brain structure. The Journal of neuroscience : the official journal of the Society for Neuroscience\| PubMed ID: 23365219	2013
A novel in vivo atlas of human hippocampal subfields using high-resolution 3 T magnetic resonance imaging. NeuroImage\| PubMed ID: 23415948	2013
Alterations of superficial white matter in schizophrenia and relationship to cognitive performance. Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology\| PubMed ID: 23591167	2013
Self-injurious behaviours are associated with alterations in the somatosensory system in children with autism spectrum disorder. Brain structure & function\| PubMed ID: 23644587	2014
Does skull shape mediate the relationship between objective features and subjective impressions about the face? NeuroImage\| PubMed ID: 23651841	2013
Mapping registration sensitivity in MR mouse brain images. NeuroImage\| PubMed ID: 23756204	2013
Disrupted prefrontal interhemispheric structural coupling in schizophrenia related to working memory performance. Schizophrenia bulletin\| PubMed ID: 23873858	2014
Gray- and white-matter anatomy of absolute pitch possessors. Cerebral cortex (New York, N.Y. : 1991)\| PubMed ID: 24304583	2015
The ENIGMA Consortium: large-scale collaborative analyses of neuroimaging and genetic data. Brain imaging and behavior\| PubMed ID: 24399358	2014
Label-fusion-segmentation and deformation-based shape analysis of deep gray matter in multiple sclerosis: the impact of thalamic subnuclei on disability. Human brain mapping\| PubMed ID: 24510715	2014
Estimating volumes of the pituitary gland from T1-weighted magnetic-resonance images: effects of age, puberty, testosterone, and estradiol. NeuroImage\| PubMed ID: 24632090	2014
Cortical morphology in children with alcohol-related neurodevelopmental disorder. Brain and behavior\| PubMed ID: 24653953	2014
Derivation of high-resolution MRI atlases of the human cerebellum at 3T and segmentation using multiple automatically generated templates. NeuroImage\| PubMed ID: 24657354	2014
Multi-atlas segmentation of the whole hippocampus and subfields using multiple automatically generated templates. NeuroImage\| PubMed ID: 24784800	2014
Multi-contrast unbiased MRI atlas of a Parkinson's disease population. International journal of computer assisted radiology and surgery\| PubMed ID: 24841147	2015
Mapping the development of the basal ganglia in children with attention-deficit/hyperactivity disorder. Journal of the American Academy of Child and Adolescent Psychiatry\| PubMed ID: 24954827	2014
Striatal morphology is associated with tobacco cigarette craving. Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology\| PubMed ID: 25056595	2015
Illness progression, recent stress, and morphometry of hippocampal subfields and medial prefrontal cortex in major depression. Biological psychiatry\| PubMed ID: 25109665	2015
Pydpiper: a flexible toolkit for constructing novel registration pipelines. Frontiers in neuroinformatics\| PubMed ID: 25126069	2014
Glutamate-mediated excitotoxicity in schizophrenia: a review. European neuropsychopharmacology : the journal of the European College of Neuropsychopharmacology\| PubMed ID: 25159198	2014
White matter lesion filling improves the accuracy of cortical thickness measurements in multiple sclerosis patients: a longitudinal study. BMC neuroscience\| PubMed ID: 25200127	2014
Illness denial in schizophrenia spectrum disorders: a function of left hemisphere dominance. Human brain mapping\| PubMed ID: 25209949	2015
Resting-state networks link invasive and noninvasive brain stimulation across diverse psychiatric and neurological diseases. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 25267639	2014
Striatal shape abnormalities as novel neurodevelopmental endophenotypes in schizophrenia: a longitudinal study. Human brain mapping\| PubMed ID: 25504933	2015
Quantitative comparison of 21 protocols for labeling hippocampal subfields and parahippocampal subregions in in vivo MRI: towards a harmonized segmentation protocol. NeuroImage\| PubMed ID: 25596463	2015
Common genetic variants influence human subcortical brain structures. Nature\| PubMed ID: 25607358	2015
Functional consequences of neurite orientation dispersion and density in humans across the adult lifespan. The Journal of neuroscience : the official journal of the Society for Neuroscience\| PubMed ID: 25632148	2015
Lifetime History of Depression Predicts Increased Amyloid-β Accumulation in Patients with Mild Cognitive Impairment. Journal of Alzheimer's disease : JAD\| PubMed ID: 25633681	2015
The effect of lifelong bilingualism on regional grey and white matter volume. Brain research\| PubMed ID: 25725380	2015
Further neuroimaging evidence for the deficit subtype of schizophrenia: a cortical connectomics analysis. JAMA psychiatry\| PubMed ID: 25786193	2015
Deep Brain Stimulation Influences Brain Structure in Alzheimer's Disease. Brain stimulation\| PubMed ID: 25814404	2015
Superficial white matter as a novel substrate of age-related cognitive decline. Neurobiology of aging\| PubMed ID: 25834938	2015
Hippocampal (subfield) volume and shape in relation to cognitive performance across the adult lifespan. Human brain mapping\| PubMed ID: 25959503	2015
Functional and structural correlates of memory in patients with mesial temporal lobe epilepsy. Frontiers in neurology\| PubMed ID: 26029159	2015
BRAIN NETWORKS. Correlated gene expression supports synchronous activity in brain networks. Science (New York, N.Y.)\| PubMed ID: 26068849	2015
Investigation of white matter abnormalities in first episode psychosis patients with persistent negative symptoms. Psychiatry research\| PubMed ID: 26211621	2015
Genome-wide variant by serum urate interaction in Parkinson's disease. Annals of neurology\| PubMed ID: 26284320	2015
Cortical Amyloid β Deposition and Current Depressive Symptoms in Alzheimer Disease and Mild Cognitive Impairment. Journal of geriatric psychiatry and neurology\| PubMed ID: 26400248	2015
Volumetric and Shape Analysis of the Thalamus and Striatum in Amnestic Mild Cognitive Impairment. Journal of Alzheimer's disease : JAD\| PubMed ID: 26444755	2015
Morphological Abnormalities of Thalamic Subnuclei in Migraine: A Multicenter MRI Study at 3 Tesla. The Journal of neuroscience : the official journal of the Society for Neuroscience\| PubMed ID: 26446230	2015
Depressive Symptoms and Small Hippocampal Volume Accelerate the Progression to Dementia from Mild Cognitive Impairment. Journal of Alzheimer's disease : JAD\| PubMed ID: 26519442	2015
Deep brain stimulation of the ventromedial prefrontal cortex causes reorganization of neuronal processes and vasculature. NeuroImage\| PubMed ID: 26525655	2015
White and Gray Matter Abnormalities After Cranial Radiation in Children and Mice. International journal of radiation oncology, biology, physics\| PubMed ID: 26530758	2015