Christopher E. Mason

Department of Physiology and Biophysics, Weill Cornell Medical College

Affiliated withWeill Cornell Medical College

Research Area

Biography

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JoVE Journal Publications

ArticleTotal : 1	Year
Publication title Cited by 115	2015

Other Publications

Article	Year
Assessing technical performance in differential gene expression experiments with external spike-in RNA control ratio mixtures. Nature communications\| PubMed ID: 25254650	2014
Identification of tightly regulated groups of genes during Drosophila melanogaster embryogenesis. Molecular systems biology\| PubMed ID: 17224916	2007
Rapid identification of disease-causing mutations using copy number analysis within linkage intervals. Human mutation\| PubMed ID: 17676595	2007
Novel NTRK1 mutations cause hereditary sensory and autonomic neuropathy type IV: demonstration of a founder mutation in the Turkish population. Neurogenetics\| PubMed ID: 18322713	2008
Genomic analysis of estrogen cascade reveals histone variant H2A.Z associated with breast cancer progression. Molecular systems biology\| PubMed ID: 18414489	2008
Personalized genomic medicine with a patchwork, partially owned genome. The Yale journal of biology and medicine\| PubMed ID: 18449389	2007
RNA-seq: an assessment of technical reproducibility and comparison with gene expression arrays. Genome research\| PubMed ID: 18550803	2008
Developmental stage and level of codon usage bias in Drosophila. Molecular biology and evolution\| PubMed ID: 18755761	2008
Molecular characterization of a patient with 3p deletion syndrome and a review of the literature. American journal of medical genetics. Part A\| PubMed ID: 18837054	2008
Susceptibility loci for intracranial aneurysm in European and Japanese populations. Nature genetics\| PubMed ID: 18997786	2008
Genomic mapping of binding regions for the Ecdysone receptor protein complex. Genome research\| PubMed ID: 19237466	2009
Functional and evolutionary insights into human brain development through global transcriptome analysis. Neuron\| PubMed ID: 19477152	2009
The syndrome of pachygyria, mental retardation, and arachnoid cysts maps to 11p15. American journal of medical genetics. Part A\| PubMed ID: 19876906	2009
Location analysis for the estrogen receptor-alpha reveals binding to diverse ERE sequences and widespread binding within repetitive DNA elements. Nucleic acids research\| PubMed ID: 20047966	2010
L-histidine decarboxylase and Tourette's syndrome. The New England journal of medicine\| PubMed ID: 20445167	2010
Standardizing the next generation of bioinformatics software development with BioHDF (HDF5). Advances in experimental medicine and biology\| PubMed ID: 20865556	2010
Multiple recurrent de novo CNVs, including duplications of the 7q11.23 Williams syndrome region, are strongly associated with autism. Neuron\| PubMed ID: 21658581	2011
A genome sequence resource for the aye-aye (Daubentonia madagascariensis), a nocturnal lemur from Madagascar. Genome biology and evolution\| PubMed ID: 22155688	2012
Detecting false-positive signals in exome sequencing. Human mutation\| PubMed ID: 22294350	2012
Faster sequencers, larger datasets, new challenges. Genome biology\| PubMed ID: 22452984	2012
Comprehensive analysis of mRNA methylation reveals enrichment in 3' UTRs and near stop codons. Cell\| PubMed ID: 22608085	2012
Base-pair resolution DNA methylation sequencing reveals profoundly divergent epigenetic landscapes in acute myeloid leukemia. PLoS genetics\| PubMed ID: 22737091	2012
Limitations of the human reference genome for personalized genomics. PloS one\| PubMed ID: 22811759	2012
Recurrent somatic TET2 mutations in normal elderly individuals with clonal hematopoiesis. Nature genetics\| PubMed ID: 23001125	2012
methylKit: a comprehensive R package for the analysis of genome-wide DNA methylation profiles. Genome biology\| PubMed ID: 23034086	2012
The birth of the Epitranscriptome: deciphering the function of RNA modifications. Genome biology\| PubMed ID: 23113984	2012
The non-human primate reference transcriptome resource (NHPRTR) for comparative functional genomics. Nucleic acids research\| PubMed ID: 23203872	2013
Two methods for full-length RNA sequencing for low quantities of cells and single cells. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 23267071	2013
Relapse-specific mutations in NT5C2 in childhood acute lymphoblastic leukemia. Nature genetics\| PubMed ID: 23377183	2013
Novel RNA regulatory mechanisms revealed in the epitranscriptome. RNA biology\| PubMed ID: 23434792	2013
Pervasive sequence patents cover the entire human genome. Genome medicine\| PubMed ID: 23522065	2013
Induction of prolonged early G1 arrest by CDK4/CDK6 inhibition reprograms lymphoma cells for durable PI3Kδ inhibition through PIK3IP1. Cell cycle (Georgetown, Tex.)\| PubMed ID: 23676220	2013
An optimized algorithm for detecting and annotating regional differential methylation. BMC bioinformatics\| PubMed ID: 23735126	2013
Small heat shock proteins Hspb7 and Hspb12 regulate early steps of cardiac morphogenesis. Developmental biology\| PubMed ID: 23850773	2013
A hybrid mechanism of action for BCL6 in B cells defined by formation of functionally distinct complexes at enhancers and promoters. Cell reports\| PubMed ID: 23911289	2013
Comprehensive evaluation of differential gene expression analysis methods for RNA-seq data. Genome biology\| PubMed ID: 24020486	2013
Induction of sarcomas by mutant IDH2. Genes & development\| PubMed ID: 24065766	2013
Crowdfunding genomics and bioinformatics. Genome biology\| PubMed ID: 24079746	2013
Identification of kinase fusion oncogenes in post-Chernobyl radiation-induced thyroid cancers. The Journal of clinical investigation\| PubMed ID: 24135138	2013
Deletion of Asxl1 results in myelodysplasia and severe developmental defects in vivo. The Journal of experimental medicine\| PubMed ID: 24218140	2013
Characterizing multi-omic data in systems biology. Advances in experimental medicine and biology\| PubMed ID: 24292960	2014
A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages. Nature communications\| PubMed ID: 24510058	2014
Assessment and improvement of Indian-origin rhesus macaque and Mauritian-origin cynomolgus macaque genome annotations using deep transcriptome sequencing data. Journal of medical primatology\| PubMed ID: 24810475	2014
The pivotal regulatory landscape of RNA modifications. Annual review of genomics and human genetics\| PubMed ID: 24898039	2014
Cell-cycle reprogramming for PI3K inhibition overrides a relapse-specific C481S BTK mutation revealed by longitudinal functional genomics in mantle cell lymphoma. Cancer discovery\| PubMed ID: 25082755	2014
Multi-platform assessment of transcriptome profiling using RNA-seq in the ABRF next-generation sequencing study. Nature biotechnology\| PubMed ID: 25150835	2014
Detecting and correcting systematic variation in large-scale RNA sequencing data. Nature biotechnology\| PubMed ID: 25150837	2014
Dynamic evolution of clonal epialleles revealed by methclone. Genome biology\| PubMed ID: 25260792	2014
Enabling large-scale next-generation sequence assembly with Blacklight. Concurrency and computation : practice & experience\| PubMed ID: 25294974	2014
Tissue-specific transcriptome sequencing analysis expands the non-human primate reference transcriptome resource (NHPRTR). Nucleic acids research\| PubMed ID: 25392405	2015
genomation: a toolkit to summarize, annotate and visualize genomic intervals. Bioinformatics (Oxford, England)\| PubMed ID: 25417204	2014
DNA hydroxymethylation profiling reveals that WT1 mutations result in loss of TET2 function in acute myeloid leukemia. Cell reports\| PubMed ID: 25482556	2014
An integrative computational approach for prioritization of genomic variants. PloS one\| PubMed ID: 25506935	2014
Comparative exomics of Phalaris cultivars under salt stress. BMC genomics\| PubMed ID: 25573273	2014
MiR-29a maintains mouse hematopoietic stem cell self-renewal by regulating Dnmt3a. Blood\| PubMed ID: 25634742	2015