Shilin Zhao

Center for Quantitative Sciences, Vanderbilt University School of Medicine

Affiliated withVanderbilt University School of Medicine

Research Area

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JoVE Journal Publications

ArticleTotal : 1	Year
Publication title Cited by 40	2016

Other Publications

Article	Year
RNAseq by Total RNA Library Identifies Additional RNAs Compared to Poly(A) RNA Library. BioMed research international\| PubMed ID: 26543871	2015
The Application of SILAC Mouse in Human Body Fluid Proteomics Analysis Reveals Protein Patterns Associated with IgA Nephropathy. Evidence-based complementary and alternative medicine : eCAM\| PubMed ID: 23762118	2013
Gene and isoform expression signatures associated with tumor stage in kidney renal clear cell carcinoma. BMC systems biology\| PubMed ID: 24564989	2013
Multi-perspective quality control of Illumina exome sequencing data using QC3. Genomics\| PubMed ID: 24703969	2014
Dermatology recorded in oracle bone inscriptions. Chinese medical journal\| PubMed ID: 24824272	2014
MultiRankSeq: multiperspective approach for RNAseq differential expression analysis and quality control. BioMed research international\| PubMed ID: 24977143	2014
Advanced heat map and clustering analysis using heatmap3. BioMed research international\| PubMed ID: 25143956	2014
Statistical strategies for microRNAseq batch effect reduction. Translational cancer research\| PubMed ID: 25258704	2014
Illumina human exome genotyping array clustering and quality control. Nature protocols\| PubMed ID: 25321409	2014
Detection of internal exon deletion with exon Del. BMC bioinformatics\| PubMed ID: 25322818	2014
RNAseqPS: A Web Tool for Estimating Sample Size and Power for RNAseq Experiment. Cancer informatics\| PubMed ID: 25374457	2014
Transcriptome-wide signatures of tumor stage in kidney renal clear cell carcinoma: connecting copy number variation, methylation and transcription factor activity. Genome medicine\| PubMed ID: 25648588	2014
Survivorship in Immune Therapy: Assessing Chronic Immune Toxicities, Health Outcomes, and Functional Status among Long-term Ipilimumab Survivors at a Single Referral Center. Cancer immunology research\| PubMed ID: 25649350	2015
Clinical Activity of Ipilimumab in Acral Melanoma: A Retrospective Review. The oncologist\| PubMed ID: 25964307	2015
Aberrant over-expression of COX-1 intersects multiple pro-tumorigenic pathways in high-grade serous ovarian cancer. Oncotarget\| PubMed ID: 25972361	2015
Transfer RNA detection by small RNA deep sequencing and disease association with myelodysplastic syndromes. BMC genomics\| PubMed ID: 26400237	2015
Acquired BRAF inhibitor resistance: A multicenter meta-analysis of the spectrum and frequencies, clinical behaviour, and phenotypic associations of resistance mechanisms. European journal of cancer (Oxford, England : 1990)\| PubMed ID: 26608120	2015
A micro-RNA expression signature for human NAFLD progression. Journal of gastroenterology\| PubMed ID: 26874844	2016
Mitochondria single nucleotide variation across six blood cell types. Mitochondrion\| PubMed ID: 26956645	2016
Practicability of detecting somatic point mutation from RNA high throughput sequencing data. Genomics\| PubMed ID: 27046520	2016
Prolonged Benefit from Ipilimumab Correlates with Improved Outcomes from Subsequent Pembrolizumab. Cancer immunology research\| PubMed ID: 27197063	2016
lncRNA expression in the auditory forebrain during postnatal development. Gene\| PubMed ID: 27544636	2016
Genetically Predicted Body Mass Index and Breast Cancer Risk: Mendelian Randomization Analyses of Data from 145,000 Women of European Descent. PLoS medicine\| PubMed ID: 27551723	2016
Heterozygosity Ratio, a Robust Global Genomic Measure of Autozygosity and Its Association with Height and Disease Risk. Genetics\| PubMed ID: 27585849	2016
Practicability of mitochondrial heteroplasmy detection through an Illumina genotyping array. Mitochondrion\| PubMed ID: 27628068	2016
Multi-perspective quality control of Illumina RNA sequencing data analysis. Briefings in functional genomics\| PubMed ID: 27687708	2016
RNA Sequencing of Formalin-Fixed, Paraffin-Embedded Specimens for Gene Expression Quantification and Data Mining. International journal of genomics\| PubMed ID: 27774452	2016
Sequencing Treatment in BRAFV600 Mutant Melanoma: Anti-PD-1 Before and After BRAF Inhibition. Journal of immunotherapy (Hagerstown, Md. : 1997)\| PubMed ID: 27846054	2016