Eric Lyons

Bio5 Institute, University of Arizona

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JoVE Journal Publications

ArticleTotal : 1	Year
Publication title Cited by 7	2017

Other Publications

Article	Year
Culture-independent molecular analysis of microbial constituents of the healthy human outer ear. Journal of clinical microbiology\| PubMed ID: 12517864	2003
Differential inhibition of inducible T cell cytokine secretion by potent iron chelators. Journal of biomolecular screening\| PubMed ID: 15799959	2005
Arabidopsis intragenomic conserved noncoding sequence. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 17301222	2007
G-boxes, bigfoot genes, and environmental response: characterization of intragenomic conserved noncoding sequences in Arabidopsis. The Plant cell\| PubMed ID: 17496117	2007
How to usefully compare homologous plant genes and chromosomes as DNA sequences. The Plant journal : for cell and molecular biology\| PubMed ID: 18269575	2008
The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus). Nature\| PubMed ID: 18432245	2008
Many or most genes in Arabidopsis transposed after the origin of the order Brassicales. Genome research\| PubMed ID: 18836034	2008
Finding and comparing syntenic regions among Arabidopsis and the outgroups papaya, poplar, and grape: CoGe with rosids. Plant physiology\| PubMed ID: 18952863	2008
The Sorghum bicolor genome and the diversification of grasses. Nature\| PubMed ID: 19189423	2009
cis-Inhibition of Notch by endogenous Delta biases the outcome of lateral inhibition. Current biology : CB\| PubMed ID: 19631544	2009
The evolution of a high copy gene array in Arabidopsis. Journal of molecular evolution\| PubMed ID: 20495794	2010
Following tetraploidy in maize, a short deletion mechanism removed genes preferentially from one of the two homologs. PLoS biology\| PubMed ID: 20613864	2010
Using genomic sequencing for classical genetics in E. coli K12. PloS one\| PubMed ID: 21364914	2011
Screening synteny blocks in pairwise genome comparisons through integer programming. BMC bioinformatics\| PubMed ID: 21501495	2011
The Selaginella genome identifies genetic changes associated with the evolution of vascular plants. Science (New York, N.Y.)\| PubMed ID: 21551031	2011
Novel temporal, fine-scale and growth variation phenotypes in roots of adult-stage maize (Zea mays L.) in response to low nitrogen stress. Plant, cell & environment\| PubMed ID: 21848860	2011
Genome-wide analysis of syntenic gene deletion in the grasses. Genome biology and evolution\| PubMed ID: 22275519	2012
Long identical multispecies elements in plant and animal genomes. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 22496592	2012
The iPlant Collaborative: Cyberinfrastructure for Plant Biology. Frontiers in plant science\| PubMed ID: 22645531	2011
The banana (Musa acuminata) genome and the evolution of monocotyledonous plants. Nature\| PubMed ID: 22801500	2012
Unleashing the genome of brassica rapa. Frontiers in plant science\| PubMed ID: 22866056	2012
Loss of syd-1 from R7 neurons disrupts two distinct phases of presynaptic development. The Journal of neuroscience : the official journal of the Society for Neuroscience\| PubMed ID: 23238725	2012
Genome of the long-living sacred lotus (Nelumbo nucifera Gaertn.). Genome biology\| PubMed ID: 23663246	2013
Architecture and evolution of a minute plant genome. Nature\| PubMed ID: 23665961	2013
Whole genome and tandem duplicate retention facilitated glucosinolate pathway diversification in the mustard family. Genome biology and evolution\| PubMed ID: 24171911	2013
Ancient eudicot hexaploidy meets ancestral eurosid gene order. BMC genomics\| PubMed ID: 24564362	2013
The dynamics of functional classes of plant genes in rediploidized ancient polyploids. BMC bioinformatics\| PubMed ID: 24564814	2013
Genome and transcriptome sequencing identifies breeding targets in the orphan crop tef (Eragrostis tef). BMC genomics\| PubMed ID: 25007843	2014
Plant genetics. Early allopolyploid evolution in the post-Neolithic Brassica napus oilseed genome. Science (New York, N.Y.)\| PubMed ID: 25146293	2014
Comparative genome analyses reveal distinct structure in the saltwater crocodile MHC. PloS one\| PubMed ID: 25503521	2014
Three crocodilian genomes reveal ancestral patterns of evolution among archosaurs. Science (New York, N.Y.)\| PubMed ID: 25504731	2014
Gene families as soft cliques with backbones: Amborella contrasted with other flowering plants. BMC genomics\| PubMed ID: 25572777	2014
ALLMAPS: robust scaffold ordering based on multiple maps. Genome biology\| PubMed ID: 25583564	2015
Optical mapping in plant comparative genomics. GigaScience\| PubMed ID: 25699175	2015
Identification of dopamine receptors across the extant avian family tree and analysis with other clades uncovers a polyploid expansion among vertebrates. Frontiers in neuroscience\| PubMed ID: 26500483	2015
The pineapple genome and the evolution of CAM photosynthesis. Nature genetics\| PubMed ID: 26523774	2015
Single-molecule sequencing of the desiccation-tolerant grass Oropetium thomaeum. Nature\| PubMed ID: 26560029	2015
SynFind: Compiling Syntenic Regions across Any Set of Genomes on Demand. Genome biology and evolution\| PubMed ID: 26560340	2015
The iPlant Collaborative: Cyberinfrastructure for Enabling Data to Discovery for the Life Sciences. PLoS biology\| PubMed ID: 26752627	2016
Relevance of in vitro agar based screens to characterize the anti-fungal activities of bacterial endophyte communities. BMC microbiology\| PubMed ID: 26772737	2016
The genome of black raspberry (Rubus occidentalis). The Plant journal : for cell and molecular biology\| PubMed ID: 27228578	2016
Insight into the evolution of the Solanaceae from the parental genomes of Petunia hybrida. Nature plants\| PubMed ID: 27255838	2016
A Novel Treatment Protects Chlorella at Commercial Scale from the Predatory Bacterium Vampirovibrio chlorellavorus. Frontiers in microbiology\| PubMed ID: 27379027	2016
A Genomic Analysis of Factors Driving lincRNA Diversification: Lessons from Plants. G3 (Bethesda, Md.)\| PubMed ID: 27440919	2016
FractBias: a graphical tool for assessing fractionation bias following polyploidy. Bioinformatics (Oxford, England)\| PubMed ID: 27794557	2017
Bringing your tools to CyVerse Discovery Environment using Docker. F1000Research\| PubMed ID: 27803802	2016
SynMap2 & SynMap3D: Web-based whole-genome synteny browsers. Bioinformatics (Oxford, England)\| PubMed ID: 28334338	2017
A Global View of RNA-Protein Interactions Identifies Post-transcriptional Regulators of Root Hair Cell Fate. Developmental cell\| PubMed ID: 28441533	2017