Tom Vercauteren

Translational Imaging Group, University College London

Affiliated withUniversity College London King's College London

Research Area

Bioengineering

Biography

https://kclpure.kcl.ac.uk/portal/tom.vercauteren.html

https://www.linkedin.com/in/tomvercauteren/

https://cai4cai.ml/

JoVE Journal Publications

ArticleTotal : 2	Year
Publication title Cited by 6	2017
Publication title Cited by 21	2020

Other Publications

Article	Year
Repression of Clostridium population in young broiler chickens after administration of a probiotic mixture. Communications in agricultural and applied biological sciences\| PubMed ID: 15560258	2004
Mosaicing of confocal microscopic in vivo soft tissue video sequences. Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention\| PubMed ID: 16685914	2005
Real time PCR quantification in groundwater of the dehalorespiring Desulfitobacterium dichloroeliminans strain DCA1. Journal of microbiological methods\| PubMed ID: 16750582	2006
Robust mosaicing with correction of motion distortions and tissue deformations for in vivo fibered microscopy. Medical image analysis\| PubMed ID: 16887375	2006
In vivo imaging of the bronchial wall microstructure using fibered confocal fluorescence microscopy. American journal of respiratory and critical care medicine\| PubMed ID: 17023733	2007
Insight into efficient image registration techniques and the demons algorithm. Information processing in medical imaging : proceedings of the ... conference\| PubMed ID: 17633724	2007
High-resolution miniprobe-based confocal microscopy in combination with video mosaicing (with video). Gastrointestinal endoscopy\| PubMed ID: 17767932	2007
Non-parametric diffeomorphic image registration with the demons algorithm. Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention\| PubMed ID: 18044584	2007
Spherical demons: fast surface registration. Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention\| PubMed ID: 18979813	2008
Symmetric log-domain diffeomorphic Registration: a demons-based approach. Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention\| PubMed ID: 18979814	2008
Diffeomorphic demons: efficient non-parametric image registration. NeuroImage\| PubMed ID: 19041946	2009
Evaluation of 14 nonlinear deformation algorithms applied to human brain MRI registration. NeuroImage\| PubMed ID: 19195496	2009
DT-REFinD: diffusion tensor registration with exact finite-strain differential. IEEE transactions on medical imaging\| PubMed ID: 19556193	2009
Spherical demons: fast diffeomorphic landmark-free surface registration. IEEE transactions on medical imaging\| PubMed ID: 19709963	2010
Asymmetric image-template registration. Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention\| PubMed ID: 20426033	2009
Learning task-optimal registration cost functions for localizing cytoarchitecture and function in the cerebral cortex. IEEE transactions on medical imaging\| PubMed ID: 20529736	2010
An image retrieval approach to setup difficulty levels in training systems for endomicroscopy diagnosis. Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention\| PubMed ID: 20879350	2010
A system for biopsy site re-targeting with uncertainty in gastroenterology and oropharyngeal examinations. Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention\| PubMed ID: 20879354	2010
Delineation of the postprostatectomy prostate bed using computed tomography: interobserver variability following the EORTC delineation guidelines. International journal of radiation oncology, biology, physics\| PubMed ID: 21377287	2011
A smart atlas for endomicroscopy using automated video retrieval. Medical image analysis\| PubMed ID: 21414833	2011
Evaluation of registration methods on thoracic CT: the EMPIRE10 challenge. IEEE transactions on medical imaging\| PubMed ID: 21632295	2011
Retrieval evaluation and distance learning from perceived similarity between endomicroscopy videos. Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention\| PubMed ID: 22003712	2011
Evaluation of deformable image coregistration in adaptive dose painting by numbers for head-and-neck cancer. International journal of radiation oncology, biology, physics\| PubMed ID: 22153223	2012
Re-localisation of a biopsy site in endoscopic images and characterisation of its uncertainty. Medical image analysis\| PubMed ID: 22197442	2012
Learning semantic and visual similarity for endomicroscopy video retrieval. IEEE transactions on medical imaging\| PubMed ID: 22353403	2012
Software for automated classification of probe-based confocal laser endomicroscopy videos of colorectal polyps. World journal of gastroenterology\| PubMed ID: 23112548	2012
Building large mosaics of confocal edomicroscopic images using visual servoing. IEEE transactions on bio-medical engineering\| PubMed ID: 23192481	2013
Online blind calibration of non-uniform photodetectors: application to endomicroscopy. Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention\| PubMed ID: 23286185	2012
Three-phase adaptive dose-painting-by-numbers for head-and-neck cancer: initial results of the phase I clinical trial. Radiotherapy and oncology : journal of the European Society for Therapeutic Radiology and Oncology\| PubMed ID: 23647760	2013
Deformation field validation and inversion applied to adaptive radiation therapy. Physics in medicine and biology\| PubMed ID: 23852041	2013
Hypofractionated whole breast irradiation for patients with large breasts: a randomized trial comparing prone and supine positions. Radiotherapy and oncology : journal of the European Society for Therapeutic Radiology and Oncology\| PubMed ID: 24044803	2013
An anatomically validated brachial plexus contouring method for intensity modulated radiation therapy planning. International journal of radiation oncology, biology, physics\| PubMed ID: 24138919	2013
A viterbi approach to topology inference for large scale endomicroscopy video mosaicing. Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention\| PubMed ID: 24505692	2013
Reliability and accuracy assessment of Radiation Therapy Oncology Group-endorsed guidelines for brachial plexus contouring. Strahlentherapie und Onkologie : Organ der Deutschen Rontgengesellschaft ... [et al]\| PubMed ID: 24715246	2014
Comparative dosimetry of three-phase adaptive and non-adaptive dose-painting IMRT for head-and-neck cancer. Radiotherapy and oncology : journal of the European Society for Therapeutic Radiology and Oncology\| PubMed ID: 24746575	2014
Hair-sparing whole brain radiotherapy with volumetric arc therapy in patients treated for brain metastases: dosimetric and clinical results of a phase II trial. Radiation oncology (London, England)\| PubMed ID: 25074394	2014
Semi-automated query construction for content-based endomicroscopy video retrieval. Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention\| PubMed ID: 25333105	2014
Reproducibility of deep inspiration breath hold for prone left-sided whole breast irradiation. Radiation oncology (London, England)\| PubMed ID: 25572707	2015
Morphometric Atlas Selection for Automatic Brachial Plexus Segmentation. International journal of radiation oncology, biology, physics\| PubMed ID: 25956831	2015
Computer-assisted surgical planning and intraoperative guidance in fetal surgery: a systematic review. Prenatal diagnosis\| PubMed ID: 26235960	2015
Deep inspiration breath hold in the prone position retracts the heart from the breast and internal mammary lymph node region. Radiotherapy and oncology : journal of the European Society for Therapeutic Radiology and Oncology\| PubMed ID: 26455452	2015
The effect of morphometric atlas selection on multi-atlas-based automatic brachial plexus segmentation. Radiation oncology (London, England)\| PubMed ID: 26696278	2015
Optimal number of atlases and label fusion for automatic multi-atlas-based brachial plexus contouring in radiotherapy treatment planning. Radiation oncology (London, England)\| PubMed ID: 26743131	2016
Setup accuracy for prone and supine whole breast irradiation. Strahlentherapie und Onkologie : Organ der Deutschen Rontgengesellschaft ... [et al]\| PubMed ID: 26864048	2016
Intensity modulated arc therapy implementation in a three phase adaptive (18)F-FDG-PET voxel intensity-based planning strategy for head-and-neck cancer. Radiation oncology (London, England)\| PubMed ID: 27039294	2016
Slic-Seg: A minimally interactive segmentation of the placenta from sparse and motion-corrupted fetal MRI in multiple views. Medical image analysis\| PubMed ID: 27179367	2016
From computer-assisted intervention research to clinical impact: The need for a holistic approach. Medical image analysis\| PubMed ID: 27425646	2016
Does an integrated boost increase acute toxicity in prone hypofractionated breast irradiation? A randomized controlled trial. Radiotherapy and oncology : journal of the European Society for Therapeutic Radiology and Oncology\| PubMed ID: 28062087	2017
Interventional Photoacoustic Imaging of the Human Placenta with Ultrasonic Tracking for Minimally Invasive Fetal Surgeries. Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention\| PubMed ID: 28101537	2015
GIFT-Cloud: A data sharing and collaboration platform for medical imaging research. Computer methods and programs in biomedicine\| PubMed ID: 28187889	2017
Adversarial training with cycle consistency for unsupervised super-resolution in endomicroscopy. Medical image analysis\| PubMed ID: 30769327	2019
Clinical Applications for Diffusion MRI and Tractography of Cranial Nerves Within the Posterior Fossa: A Systematic Review. Frontiers in neuroscience\| PubMed ID: 30809109	2019
Early neuropathological and neurobehavioral consequences of preterm birth in a rabbit model. Scientific reports\| PubMed ID: 30837582	2019
Intraoperative multispectral and hyperspectral label-free imaging: A systematic review of in vivo clinical studies. Journal of biophotonics\| PubMed ID: 30859757	2019
Super-resolution for upper abdominal MRI: Acquisition and post-processing protocol optimization using brain MRI control data and expert reader validation. Magnetic resonance in medicine\| PubMed ID: 31264270	2019
Pruning strategies for efficient online globally consistent mosaicking in fetoscopy. Journal of medical imaging (Bellingham, Wash.)\| PubMed ID: 31403054	2019
Automatic Brain Tumor Segmentation Based on Cascaded Convolutional Neural Networks With Uncertainty Estimation. Frontiers in computational neuroscience\| PubMed ID: 31456678	2019
Automated postoperative muscle assessment of hip arthroplasty patients using multimodal imaging joint segmentation. Computer methods and programs in biomedicine\| PubMed ID: 31522089	2020
Aleatoric uncertainty estimation with test-time augmentation for medical image segmentation with convolutional neural networks. Neurocomputing\| PubMed ID: 31595105	2019
Photoacoustic imaging of the human placental vasculature. Journal of biophotonics\| PubMed ID: 31661594	2020
A 30-Year Clinical and Magnetic Resonance Imaging Observational Study of Multiple Sclerosis and Clinically Isolated Syndromes. Annals of neurology\| PubMed ID: 31693200	2020
An automated framework for localization, segmentation and super-resolution reconstruction of fetal brain MRI. NeuroImage\| PubMed ID: 31704293	2020
Publisher Correction: Early neuropathological and neurobehavioral consequences of preterm birth in a rabbit model. Scientific reports\| PubMed ID: 31723197	2019
Improved fetal blood oxygenation and placental estimated measurements of diffusion-weighted MRI using data-driven Bayesian modeling. Magnetic resonance in medicine\| PubMed ID: 31742785	2020
An artificial intelligence framework for automatic segmentation and volumetry of vestibular schwannomas from contrast-enhanced T1-weighted and high-resolution T2-weighted MRI. Journal of neurosurgery\| PubMed ID: 31812137	2019
Minimally invasive photoacoustic imaging: Current status and future perspectives. Photoacoustics\| PubMed ID: 31871889	2019
CAI4CAI: The Rise of Contextual Artificial Intelligence in Computer Assisted Interventions. Proceedings of the IEEE. Institute of Electrical and Electronics Engineers\| PubMed ID: 31920208	2020
Image computing for fibre-bundle endomicroscopy: A review. Medical image analysis\| PubMed ID: 32279053	2020
FetNet: a recurrent convolutional network for occlusion identification in fetoscopic videos. International journal of computer assisted radiology and surgery\| PubMed ID: 32350787	2020
Deep learning-based monocular placental pose estimation: towards collaborative robotics in fetoscopy. International journal of computer assisted radiology and surgery\| PubMed ID: 32350788	2020
Learning from irregularly sampled data for endomicroscopy super-resolution: a comparative study of sparse and dense approaches. International journal of computer assisted radiology and surgery\| PubMed ID: 32415459	2020
Manual segmentation versus semi-automated segmentation for quantifying vestibular schwannoma volume on MRI. International journal of computer assisted radiology and surgery\| PubMed ID: 32676869	2020
Deep learning-based fetoscopic mosaicking for field-of-view expansion. International journal of computer assisted radiology and surgery\| PubMed ID: 32808148	2020
Learning joint segmentation of tissues and brain lesions from task-specific hetero-modal domain-shifted datasets. Medical image analysis\| PubMed ID: 33129151	2021
Refractive Two-View Reconstruction for Underwater 3D Vision. International journal of computer vision\| PubMed ID: 33343083	2020
Handheld Active Add-On Control Unit for a Cable-Driven Flexible Endoscope. Frontiers in robotics and AI\| PubMed ID: 33501102	2019