Paul W. Sternberg

Division of Biology and Bioengineering, California Institute of Technology

Affiliated withCalifornia Institute of Technology

Research Area

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JoVE Journal Publications

ArticleTotal : 2	Year
Publication title Cited by 3	2017
Publication title Cited by 1	2024

Other Publications

Article	Year
Anchor cell signaling and vulval precursor cell positioning establish a reproducible spatial context during C. elegans vulval induction. Developmental biology\| PubMed ID: 27288708	2016
Sensory processing by neural circuits in Caenorhabditis elegans. Current opinion in neurobiology\| PubMed ID: 15321066	2004
C. elegans LIN-18 is a Ryk ortholog and functions in parallel to LIN-17/Frizzled in Wnt signaling. Cell\| PubMed ID: 15369677	2004
Textpresso: an ontology-based information retrieval and extraction system for biological literature. PLoS biology\| PubMed ID: 15383839	2004
The L-type cyclin CYL-1 and the heat-shock-factor HSF-1 are required for heat-shock-induced protein expression in Caenorhabditis elegans. Genetics\| PubMed ID: 15611166	2004
An automated system for measuring parameters of nematode sinusoidal movement. BMC genetics\| PubMed ID: 15698479	2005
Transcriptional network underlying Caenorhabditis elegans vulval development. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 15749820	2005
FOS-1 promotes basement-membrane removal during anchor-cell invasion in C. elegans. Cell\| PubMed ID: 15960981	2005
WormBase: better software, richer content. Nucleic acids research\| PubMed ID: 16381915	2006
Intercellular coupling amplifies fate segregation during Caenorhabditis elegans vulval development. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 16432231	2006
Pathway to RAS. Genetics\| PubMed ID: 16505216	2006
Genome-wide prediction of C. elegans genetic interactions. Science (New York, N.Y.)\| PubMed ID: 16527984	2006
A C. elegans stretch receptor neuron revealed by a mechanosensitive TRP channel homologue. Nature\| PubMed ID: 16572173	2006
DAF-16/FOXO regulates transcription of cki-1/Cip/Kip and repression of lin-4 during C. elegans L1 arrest. Current biology : CB\| PubMed ID: 16631585	2006
Conservation rules, their breakdown, and optimality in Caenorhabditis sinusoidal locomotion. Journal of theoretical biology\| PubMed ID: 16759670	2006
Automatic document classification of biological literature. BMC bioinformatics\| PubMed ID: 16893465	2006
Initiation of male sperm-transfer behavior in Caenorhabditis elegans requires input from the ventral nerve cord. BMC biology\| PubMed ID: 16911797	2006
sli-3 negatively regulates the LET-23/epidermal growth factor receptor-mediated vulval induction pathway in Caenorhabditis elegans. Genetics\| PubMed ID: 16980384	2006
A C. elegans model of nicotine-dependent behavior: regulation by TRP-family channels. Cell\| PubMed ID: 17081982	2006
Optofluidic microscopy--a method for implementing a high resolution optical microscope on a chip. Lab on a chip\| PubMed ID: 17102839	2006
C. elegans EVI1 proto-oncogene, EGL-43, is necessary for Notch-mediated cell fate specification and regulates cell invasion. Development (Cambridge, England)\| PubMed ID: 17215301	2007
Evolutionary conservation of cell migration genes: from nematode neurons to vertebrate neural crest. Genes & development\| PubMed ID: 17322398	2007
An activating mutation in sos-1 identifies its Dbl domain as a critical inhibitor of the epidermal growth factor receptor pathway during Caenorhabditis elegans vulval development. Molecular and cellular biology\| PubMed ID: 17339331	2007
The tailless ortholog nhr-67 regulates patterning of gene expression and morphogenesis in the C. elegans vulva. PLoS genetics\| PubMed ID: 17465684	2007
Nematodes, bacteria, and flies: a tripartite model for nematode parasitism. Current biology : CB\| PubMed ID: 17475494	2007
The versatile worm: genetic and genomic resources for Caenorhabditis elegans research. Nature reviews. Genetics\| PubMed ID: 17549065	2007
Genetic analysis of dauer formation in Caenorhabditis briggsae. Genetics\| PubMed ID: 17660533	2007
Systems level circuit model of C. elegans undulatory locomotion: mathematical modeling and molecular genetics. Journal of computational neuroscience\| PubMed ID: 17768672	2008
Postembryonic RNAi in Heterorhabditis bacteriophora: a nematode insect parasite and host for insect pathogenic symbionts. BMC developmental biology\| PubMed ID: 17803822	2007
Epidermal growth factor signaling induces behavioral quiescence in Caenorhabditis elegans. Nature neuroscience\| PubMed ID: 17891142	2007
The C. elegans ROR receptor tyrosine kinase, CAM-1, non-autonomously inhibits the Wnt pathway. Development (Cambridge, England)\| PubMed ID: 17942487	2007
WormBase 2007. Nucleic acids research\| PubMed ID: 17991679	2008
Vulval development. WormBook : the online review of C. elegans biology\| PubMed ID: 18050418	2005
Searching WormBase for information about Caenorhabditis elegans. Current protocols in bioinformatics\| PubMed ID: 18428757	2006
Acute carbon dioxide avoidance in Caenorhabditis elegans. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 18524955	2008
Genomic-bioinformatic analysis of transcripts enriched in the third-stage larva of the parasitic nematode Ascaris suum. PLoS neglected tropical diseases\| PubMed ID: 18560474	2008
Building a cell and anatomy ontology of Caenorhabditis elegans. Comparative and functional genomics\| PubMed ID: 18629098	2003
A blend of small molecules regulates both mating and development in Caenorhabditis elegans. Nature\| PubMed ID: 18650807	2008
Lensless high-resolution on-chip optofluidic microscopes for Caenorhabditis elegans and cell imaging. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 18663227	2008
Opposing Wnt pathways orient cell polarity during organogenesis. Cell\| PubMed ID: 18724937	2008
Tv-RIO1 - an atypical protein kinase from the parasitic nematode Trichostrongylus vitrinus. Parasites & vectors\| PubMed ID: 18808669	2008
Ror receptor tyrosine kinases: orphans no more. Trends in cell biology\| PubMed ID: 18848778	2008
The neuroscience information framework: a data and knowledge environment for neuroscience. Neuroinformatics\| PubMed ID: 18946742	2008
Textpresso for neuroscience: searching the full text of thousands of neuroscience research papers. Neuroinformatics\| PubMed ID: 18949581	2008
Issues in the design of a pilot concept-based query interface for the neuroinformatics information framework. Neuroinformatics\| PubMed ID: 18953674	2008
Federated access to heterogeneous information resources in the Neuroscience Information Framework (NIF). Neuroinformatics\| PubMed ID: 18958629	2008
Multigenome DNA sequence conservation identifies Hox cis-regulatory elements. Genome research\| PubMed ID: 18981268	2008
Evolution of a polymodal sensory response network. BMC biology\| PubMed ID: 19077305	2008
The Caenorhabditis elegans vulva: a post-embryonic gene regulatory network controlling organogenesis. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 19104047	2008
Wnt and EGF pathways act together to induce C. elegans male hook development. Developmental biology\| PubMed ID: 19154732	2009
RNA Pol II accumulates at promoters of growth genes during developmental arrest. Science (New York, N.Y.)\| PubMed ID: 19251593	2009
A shortcut to identifying small molecule signals that regulate behavior and development in Caenorhabditis elegans. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 19346493	2009
Predicting phenotypic diversity and the underlying quantitative molecular transitions. PLoS computational biology\| PubMed ID: 19360093	2009
Transcriptomic analysis of the entomopathogenic nematode Heterorhabditis bacteriophora TTO1. BMC genomics\| PubMed ID: 19405965	2009
Coordination of opposing sex-specific and core muscle groups regulates male tail posture during Caenorhabditis elegans male mating behavior. BMC biology\| PubMed ID: 19545405	2009
The NK-2 class homeodomain factor CEH-51 and the T-box factor TBX-35 have overlapping function in C. elegans mesoderm development. Development (Cambridge, England)\| PubMed ID: 19605496	2009
Semi-automated curation of protein subcellular localization: a text mining-based approach to Gene Ontology (GO) Cellular Component curation. BMC bioinformatics\| PubMed ID: 19622167	2009
Protein kinase VRK-1 regulates cell invasion and EGL-17/FGF signaling in Caenorhabditis elegans. Developmental biology\| PubMed ID: 19679119	2009
Structural and functional characterisation of the fork head transcription factor-encoding gene, Hc-daf-16, from the parasitic nematode Haemonchus contortus (Strongylida). International journal for parasitology\| PubMed ID: 19796644	2010
The C. elegans tailless/Tlx homolog nhr-67 regulates a stage-specific program of linker cell migration in male gonadogenesis. Development (Cambridge, England)\| PubMed ID: 19906858	2009
WormBase: a comprehensive resource for nematode research. Nucleic acids research\| PubMed ID: 19910365	2010
Transcriptional profiling of trait deterioration in the insect pathogenic nematode Heterorhabditis bacteriophora. BMC genomics\| PubMed ID: 20003534	2009
C. elegans BED domain transcription factor BED-3 controls lineage-specific cell proliferation during organogenesis. Developmental biology\| PubMed ID: 20005870	2010
The roles of EGF and Wnt signaling during patterning of the C. elegans Bgamma/delta Equivalence Group. BMC developmental biology\| PubMed ID: 20042118	2009
A comparison of experience-dependent locomotory behaviors and biogenic amine neurons in nematode relatives of Caenorhabditis elegans. BMC neuroscience\| PubMed ID: 20167133	2010
Differences in transcription between free-living and CO2-activated third-stage larvae of Haemonchus contortus. BMC genomics\| PubMed ID: 20420710	2010
Re-programming of C. elegans male epidermal precursor fates by Wnt, Hox, and LIN-12/Notch activities. Developmental biology\| PubMed ID: 20478294	2010
Massively parallel sequencing and analysis of the Necator americanus transcriptome. PLoS neglected tropical diseases\| PubMed ID: 20485481	2010
Paired and LIM class homeodomain proteins coordinate differentiation of the C. elegans ALA neuron. Development (Cambridge, England)\| PubMed ID: 20501595	2010
A practical, bioinformatic workflow system for large data sets generated by next-generation sequencing. Nucleic acids research\| PubMed ID: 20682560	2010
Scaffolding a Caenorhabditis nematode genome with RNA-seq. Genome research\| PubMed ID: 20980554	2010
Receptor-type guanylate cyclase is required for carbon dioxide sensation by Caenorhabditis elegans. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 21173231	2011
Deep insights into Dictyocaulus viviparus transcriptomes provides unique prospects for new drug targets and disease intervention. Biotechnology advances\| PubMed ID: 21182926	2011
The LIN-15A and LIN-56 transcriptional regulators interact to negatively regulate EGF/Ras signaling in Caenorhabditis elegans vulval cell-fate determination. Genetics\| PubMed ID: 21196525	2011
Worm Phenotype Ontology: integrating phenotype data within and beyond the C. elegans community. BMC bioinformatics\| PubMed ID: 21261995	2011
A sensory code for host seeking in parasitic nematodes. Current biology : CB\| PubMed ID: 21353558	2011
Ascaroside expression in Caenorhabditis elegans is strongly dependent on diet and developmental stage. PloS one\| PubMed ID: 21423575	2011
Sensitive and precise quantification of insulin-like mRNA expression in Caenorhabditis elegans. PloS one\| PubMed ID: 21445366	2011
Toward an interactive article: integrating journals and biological databases. BMC bioinformatics\| PubMed ID: 21595960	2011
Transfer characteristics of a thermosensory synapse in Caenorhabditis elegans. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 21606366	2011
Metazoan operons accelerate recovery from growth-arrested states. Cell\| PubMed ID: 21663799	2011
Microfluidic chamber arrays for whole-organism behavior-based chemical screening. Lab on a chip\| PubMed ID: 21935539	2011
WormBase 2012: more genomes, more data, new website. Nucleic acids research\| PubMed ID: 22067452	2012
Comparative metabolomics reveals biogenesis of ascarosides, a modular library of small-molecule signals in C. elegans. Journal of the American Chemical Society\| PubMed ID: 22239548	2012
A modular library of small molecule signals regulates social behaviors in Caenorhabditis elegans. PLoS biology\| PubMed ID: 22253572	2012
Automatic categorization of diverse experimental information in the bioscience literature. BMC bioinformatics\| PubMed ID: 22280404	2012
An entomopathogenic nematode by any other name. PLoS pathogens\| PubMed ID: 22396642	2012
Ascaroside signaling is widely conserved among nematodes. Current biology : CB\| PubMed ID: 22503501	2012
Hormonal signal amplification mediates environmental conditions during development and controls an irreversible commitment to adulthood. PLoS biology\| PubMed ID: 22505848	2012
The cGMP signaling pathway affects feeding behavior in the necromenic nematode Pristionchus pacificus. PloS one\| PubMed ID: 22563372	2012
Targeted metabolomics reveals a male pheromone and sex-specific ascaroside biosynthesis in Caenorhabditis elegans. ACS chemical biology\| PubMed ID: 22662967	2012
Entomopathogenic nematodes. Current biology : CB\| PubMed ID: 22677279	2012
Transcription factor redundancy and tissue-specific regulation: evidence from functional and physical network connectivity. Genome research\| PubMed ID: 22730465	2012
Olfaction shapes host-parasite interactions in parasitic nematodes. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 22851767	2012
Nematode-bacterium symbioses--cooperation and conflict revealed in the "omics" age. The Biological bulletin\| PubMed ID: 22983035	2012
Functional transcriptomics of a migrating cell in Caenorhabditis elegans. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 22991463	2012
Text mining in the biocuration workflow: applications for literature curation at WormBase, dictyBase and TAIR. Database : the journal of biological databases and curation\| PubMed ID: 23160413	2012
Wide and scalable field-of-view Talbot-grid-based fluorescence microscopy. Optics letters\| PubMed ID: 23202123	2012
Sex-specific mating pheromones in the nematode Panagrellus redivivus. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 23213209	2012
Nematode-trapping fungi eavesdrop on nematode pheromones. Current biology : CB\| PubMed ID: 23246407	2013
Identification of DVA interneuron regulatory sequences in Caenorhabditis elegans. PloS one\| PubMed ID: 23383017	2013
Origin and evolution of dishevelled. G3 (Bethesda, Md.)\| PubMed ID: 23390601	2013
The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle. Genetics\| PubMed ID: 23410827	2013
Incorporating genomics into the toolkit of nematology. Journal of nematology\| PubMed ID: 23482088	2012
Succinylated octopamine ascarosides and a new pathway of biogenic amine metabolism in Caenorhabditis elegans. The Journal of biological chemistry\| PubMed ID: 23689506	2013
Systematic profiling of Caenorhabditis elegans locomotive behaviors reveals additional components in G-protein Gαq signaling. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 23818641	2013
A lover and a fighter: the genome sequence of an entomopathogenic nematode Heterorhabditis bacteriophora. PloS one\| PubMed ID: 23874975	2013
FGF signaling regulates Wnt ligand expression to control vulval cell lineage polarity in C. elegans. Development (Cambridge, England)\| PubMed ID: 23946444	2013
Transgene-free genome editing in Caenorhabditis elegans using CRISPR-Cas. Genetics\| PubMed ID: 23979577	2013
The genome and developmental transcriptome of the strongylid nematode Haemonchus contortus. Genome biology\| PubMed ID: 23985341	2013
WormBase: Annotating many nematode genomes. Worm\| PubMed ID: 24058818	2012
WormBase 2014: new views of curated biology. Nucleic acids research\| PubMed ID: 24194605	2014
Multilevel modulation of a sensory motor circuit during C. elegans sleep and arousal. Cell\| PubMed ID: 24439380	2014
Genome of the human hookworm Necator americanus. Nature genetics\| PubMed ID: 24441737	2014
A modified mole cricket lure and description of Scapteriscus borellii (Orthoptera: Gryllotalpidae) range expansion and calling song in California. Environmental entomology\| PubMed ID: 24472207	2014
Analysis of the transcriptome of adult Dictyocaulus filaria and comparison with Dictyocaulus viviparus, with a focus on molecules involved in host-parasite interactions. International journal for parasitology\| PubMed ID: 24487001	2014
Microsporidia-nematode associations in methane seeps reveal basal fungal parasitism in the deep sea. Frontiers in microbiology\| PubMed ID: 24575084	2014
Probing the equatorial groove of the hookworm protein and vaccine candidate antigen, Na-ASP-2. The international journal of biochemistry & cell biology\| PubMed ID: 24631931	2014
Structural and functional characterization of the α-tubulin acetyltransferase MEC-17. Journal of molecular biology\| PubMed ID: 24846647	2014
Genome and transcriptome of the porcine whipworm Trichuris suis. Nature genetics\| PubMed ID: 24929829	2014
Comparative validation of the D. melanogaster modENCODE transcriptome annotation. Genome research\| PubMed ID: 24985915	2014
The Opisthorchis viverrini genome provides insights into life in the bile duct. Nature communications\| PubMed ID: 25007141	2014
Bioinformatic exploration of RIO protein kinases of parasitic and free-living nematodes. International journal for parasitology\| PubMed ID: 25038443	2014
NilD CRISPR RNA contributes to Xenorhabdus nematophila colonization of symbiotic host nematodes. Molecular microbiology\| PubMed ID: 25041533	2014
BC4GO: a full-text corpus for the BioCreative IV GO task. Database : the journal of biological databases and curation\| PubMed ID: 25070993	2014
Evidence of hermaphroditism and sex ratio distortion in the fungal feeding nematode Bursaphelenchus okinawaensis. G3 (Bethesda, Md.)\| PubMed ID: 25122669	2014
Controlled sumoylation of the mevalonate pathway enzyme HMGS-1 regulates metabolism during aging. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 25187565	2014
Archaerhodopsin variants with enhanced voltage-sensitive fluorescence in mammalian and Caenorhabditis elegans neurons. Nature communications\| PubMed ID: 25222271	2014
Spatial and molecular cues for cell outgrowth during C. elegans uterine development. Developmental biology\| PubMed ID: 25281934	2014
Transgene-free genome editing by germline injection of CRISPR/Cas RNA. Methods in enzymology\| PubMed ID: 25398352	2014
LINKIN, a new transmembrane protein necessary for cell adhesion. eLife\| PubMed ID: 25437307	2014
Communication between oocytes and somatic cells regulates volatile pheromone production in Caenorhabditis elegans. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 25453110	2014
Hierarchical sparse coding in the sensory system of Caenorhabditis elegans. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 25583501	2015
Genetic blueprint of the zoonotic pathogen Toxocara canis. Nature communications\| PubMed ID: 25649139	2015
Cell-specific proteomic analysis in Caenorhabditis elegans. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 25691744	2015
The genome and transcriptome of the zoonotic hookworm Ancylostoma ceylanicum identify infection-specific gene families. Nature genetics\| PubMed ID: 25730766	2015
Flatworms have lost the right open reading frame kinase 3 gene during evolution. Scientific reports\| PubMed ID: 25976756	2015
Cracking the nodule worm code advances knowledge of parasite biology and biotechnology to tackle major diseases of livestock. Biotechnology advances\| PubMed ID: 26026709	2015
Morphologically defined sub-stages of C. elegans vulval development in the fourth larval stage. BMC developmental biology\| PubMed ID: 26066484	2015
Conserved nematode signalling molecules elicit plant defenses and pathogen resistance. Nature communications\| PubMed ID: 26203561	2015
Genetically Encoded Spy Peptide Fusion System to Detect Plasma Membrane-Localized Proteins In Vivo. Chemistry & biology\| PubMed ID: 26211362	2015
The barber's pole worm CAP protein superfamily--A basis for fundamental discovery and biotechnology advances. Biotechnology advances\| PubMed ID: 26239368	2015
Comparative genomics of Steinernema reveals deeply conserved gene regulatory networks. Genome biology\| PubMed ID: 26392177	2015
Sex Attraction and Mating in Bursaphelenchus okinawaensis and B. xylophilus. Journal of nematology\| PubMed ID: 26527838	2015
WormBase 2016: expanding to enable helminth genomic research. Nucleic acids research\| PubMed ID: 26578572	2016
Defining the Schistosoma haematobium kinome enables the prediction of essential kinases as anti-schistosome drug targets. Scientific reports\| PubMed ID: 26635209	2015
The Haemonchus contortus kinome--a resource for fundamental molecular investigations and drug discovery. Parasites & vectors\| PubMed ID: 26644012	2015
Phylogenomic and biogeographic reconstruction of the Trichinella complex. Nature communications\| PubMed ID: 26830005	2016
Reconstruction of the insulin-like signalling pathway of Haemonchus contortus. Parasites & vectors\| PubMed ID: 26842675	2016
Dictyocaulus viviparus genome, variome and transcriptome elucidate lungworm biology and support future intervention. Scientific reports\| PubMed ID: 26856411	2016
Muscle Logic: New Knowledge Resource for Anatomy Enables Comprehensive Searches of the Literature on the Feeding Muscles of Mammals. PloS one\| PubMed ID: 26870952	2016
Contrasting responses within a single neuron class enable sex-specific attraction in Caenorhabditis elegans. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 26903633	2016
CAP protein superfamily members in Toxocara canis. Parasites & vectors\| PubMed ID: 27342979	2016
Analyses of Compact Trichinella Kinomes Reveal a MOS-Like Protein Kinase with a Unique N-Terminal Domain. G3 (Bethesda, Md.)\| PubMed ID: 27412987	2016
C. elegans Stress-Induced Sleep Emerges from the Collective Action of Multiple Neuropeptides. Current biology : CB\| PubMed ID: 27546573	2016
Tissue enrichment analysis for C. elegans genomics. BMC bioinformatics\| PubMed ID: 27618863	2016
The tubulin repertoire of C. elegans sensory neurons and its context-dependent role in process outgrowth. Molecular biology of the cell\| PubMed ID: 27654945	2016
Mapping a multiplexed zoo of mRNA expression. Development (Cambridge, England)\| PubMed ID: 27702788	2016
Enhancer Sharing Promotes Neighborhoods of Transcriptional Regulation Across Eukaryotes. G3 (Bethesda, Md.)\| PubMed ID: 27799341	2016
cGAL, a temperature-robust GAL4-UAS system for Caenorhabditis elegans. Nature methods\| PubMed ID: 27992408	2017
Nematophagous fungus Arthrobotrys oligospora mimics olfactory cues of sex and food to lure its nematode prey. eLife\| PubMed ID: 28098555	2017
In Retrospect: Forty years of cellular clues from worms. Nature\| PubMed ID: 28358092	2017
Biosynthesis of Modular Ascarosides in C. elegans. Angewandte Chemie (International ed. in English)\| PubMed ID: 28371259	2017
Improved Synthesis for Modular Ascarosides Uncovers Biological Activity. Organic letters\| PubMed ID: 28513161	2017
Whipworm kinomes reflect a unique biology and adaptation to the host animal. International journal for parasitology\| PubMed ID: 28606697	2017
Deguelin exerts potent nematocidal activity the mitochondrial respiratory chain. FASEB journal : official publication of the Federation of American Societies for Experimental Biology\| PubMed ID: 28687609	2017
The Jellyfish Cassiopea Exhibits a Sleep-like State. Current biology : CB\| PubMed ID: 28943083	2017
WormBase 2017: molting into a new stage. Nucleic acids research\| PubMed ID: 29069413	2018
Genome-wide discovery of active regulatory elements and transcription factor footprints in using DNase-seq. Genome research\| PubMed ID: 29074739	2017
FMRFamide-like peptides expand the behavioral repertoire of a densely connected nervous system. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 29167374	2017
Non-neuronal cell outgrowth in . Worm\| PubMed ID: 29238627	2017
A Toolkit of Engineered Recombinational Balancers in C. elegans. Trends in genetics : TIG\| PubMed ID: 29395380	2018
Metabolomic "Dark Matter" Dependent on Peroxisomal β-Oxidation in Caenorhabditis elegans. Journal of the American Chemical Society\| PubMed ID: 29401383	2018
Reconstructing a metazoan genetic pathway with transcriptome-wide epistasis measurements. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 29531064	2018
Split cGAL, an intersectional strategy using a split intein for refined spatiotemporal transgene control in . Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 29581308	2018
Micropublication: incentivizing community curation and placing unpublished data into the public domain. Database : the journal of biological databases and curation\| PubMed ID: 29688367	2018
Using Transcriptomes as Mutant Phenotypes Reveals Functional Regions of a Mediator Subunit in . Genetics\| PubMed ID: 30030292	2018
An Efficient Genome Editing Strategy To Generate Putative Null Mutants in Using CRISPR/Cas9. G3 (Bethesda, Md.)\| PubMed ID: 30224336	2018
Opening up a large can of worms. Nature genetics\| PubMed ID: 30514910	2019
Comparative Epigenomics Reveals that RNA Polymerase II Pausing and Chromatin Domain Organization Control Nematode piRNA Biogenesis. Developmental cell\| PubMed ID: 30713076	2019
Autism-associated missense genetic variants impact locomotion and neurodevelopment in Caenorhabditis elegans. Human molecular genetics\| PubMed ID: 31220273	2019
Genetic markers enable the verification and manipulation of the dauer entry decision. Developmental biology\| PubMed ID: 31242447	2019
Newly Identified Nematodes from Mono Lake Exhibit Extreme Arsenic Resistance. Current biology : CB\| PubMed ID: 31564490	2019
WormBase: a modern Model Organism Information Resource. Nucleic acids research\| PubMed ID: 31642470	2020
Text mining meets community curation: a newly designed curation platform to improve author experience and participation at WormBase. Database : the journal of biological databases and curation\| PubMed ID: 32185395	2020
Elucidating the molecular and developmental biology of parasitic nematodes: Moving to a multiomics paradigm. Advances in parasitology\| PubMed ID: 32291085	2020
Predicting gene essentiality in by feature engineering and machine-learning. Computational and structural biotechnology journal\| PubMed ID: 32489524	2020
PIEZO channel coordinates multiple reproductive tissues to govern ovulation. eLife\| PubMed ID: 32490809	2020
AF4/FMR2 Family Homolog Regulates Heat-Shock-Induced Gene Expression. Genetics\| PubMed ID: 32518061	2020
RNA Pol II Length and Disorder Enable Cooperative Scaling of Transcriptional Bursting. Molecular cell\| PubMed ID: 32544389	2020
is a novel allele of . microPublication biology\| PubMed ID: 32550355	2017
2018 Update on Protein-Protein Interaction Data in WormBase. microPublication biology\| PubMed ID: 32550373	2018
Application of the red-shifted channel rhodopsin Chrimson for the cGAL bipartite system. microPublication biology\| PubMed ID: 32550400	2018
Genome editing of using CRISPR/Cas9 co-conversion marker . microPublication biology\| PubMed ID: 32550401	2019
The role of in vulval cell lineage polarity. microPublication biology\| PubMed ID: 32550414	2019
Effects of ASD-associated /PTEN missense variants on dauer development. microPublication biology\| PubMed ID: 32550443	2019
Vennter - An interactive analysis tool for WormBase interaction data using Venn diagrams. microPublication biology\| PubMed ID: 32550480	2020
Automated generation of gene summaries at the Alliance of Genome Resources. Database : the journal of biological databases and curation\| PubMed ID: 32559296	2020
Release and targeting of polycystin-2-carrying ciliary extracellular vesicles. Current biology : CB\| PubMed ID: 32634412	2020
Signaling by AWC Olfactory Neurons Is Necessary for ' Response to Prenol, an Odor Associated with Nematode-Infected Insects. Genetics\| PubMed ID: 32680884	2020
Modular metabolite assembly in depends on carboxylesterases and formation of lysosome-related organelles. eLife\| PubMed ID: 33063667	2020
Autonomous adaptive data acquisition for scanning hyperspectral imaging. Communications biology\| PubMed ID: 33208883	2020
Extrasynaptic acetylcholine signaling through a muscarinic receptor regulates cell migration. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 33361149	2021
Conserved missense variant in ortholog impairs fecundity in . microPublication biology\| PubMed ID: 33474529	2021
Wormicloud: a new text summarization tool based on word clouds to explore the C. elegans literature. Database : the journal of biological databases and curation\| PubMed ID: 33787871	2021
CYK-1/Formin activation in cortical RhoA signaling centers promotes organismal left-right symmetry breaking. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 33972425	2021
Transcriptional Response to a Dauer-Inducing Ascaroside Cocktail in Late L1 in . microPublication biology\| PubMed ID: 33997661	2021
A Mutation of in . microPublication biology\| PubMed ID: 34258545	2021
Combinatorial Assembly of Modular Glucosides via Carboxylesterases Regulates Starvation Survival. Journal of the American Chemical Society\| PubMed ID: 34460264	2021
A conserved behavioral role for a nematode interneuron neuropeptide receptor. Genetics\| PubMed ID: 34741504	2022
The entomopathogenic nematode Steinernema hermaphroditum is a self-fertilizing hermaphrodite and a genetically tractable system for the study of parasitic and mutualistic symbiosis. Genetics\| PubMed ID: 34791196	2022
Formation and function of dauer ascarosides in the nematodes Caenorhabditis briggsae and Caenorhabditis elegans. G3 (Bethesda, Md.)\| PubMed ID: 35094091	2022
WormBase in 2022-data, processes, and tools for analyzing Caenorhabditis elegans. Genetics\| PubMed ID: 35134929	2022
Nematode ascarosides attenuate mammalian type 2 inflammatory responses. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 35210367	2022
DiI staining of sensory neurons in the entomopathogenic nematode . microPublication biology\| PubMed ID: 35224464	2022
Both entry to and exit from diapause arrest in Caenorhabditis elegans are regulated by a steroid hormone pathway. Development (Cambridge, England)\| PubMed ID: 35394033	2022
Interneuron control of C. elegans developmental decision-making. Current biology : CB\| PubMed ID: 35447086	2022
Genome annotation of Caenorhabditis briggsae by TEC-RED identifies new exons, paralogs, and conserved and novel operons. G3 (Bethesda, Md.)\| PubMed ID: 35485953	2022
Possible stochastic sex determination in Bursaphelenchus nematodes. Nature communications\| PubMed ID: 35546147	2022
Loss of FAM136A results in minor locomotion and behavioral changes in . microPublication biology\| PubMed ID: 35668716	2022
Brain-wide bidirectional neuropeptide modulation of individual neuron classes regulates a developmental decision. Current biology : CB\| PubMed ID: 35679871	2022
and mechanosensors are involved in mating behavior in . PNAS nexus\| PubMed ID: 36712331	2022
LINKIN-associated proteins necessary for tissue integrity during collective cell migration. bioRxiv : the preprint server for biology\| PubMed ID: 36798316	2023
Transcriptomic profiling of sex-specific olfactory neurons reveals subset-specific receptor expression in Caenorhabditis elegans. Genetics\| PubMed ID: 36801937	2023
Differential processing of a chemosensory cue across life stages sharing the same valence state in . Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 37126715	2023
Semantic Representation of Neural Circuit Knowledge in . bioRxiv : the preprint server for biology\| PubMed ID: 37162850	2023
Single-nucleus resolution mapping of the adult C. elegans and its application to elucidate inter- and trans-generational response to alcohol. Cell reports\| PubMed ID: 37227821	2023
Body stiffness is a mechanical property that facilitates contact-mediated mate recognition in Caenorhabditis elegans. Current biology : CB\| PubMed ID: 37541249	2023
The alliance of genome resources: transforming comparative genomics. Mammalian genome : official journal of the International Mammalian Genome Society\| PubMed ID: 37666946	2023
Fluorescence dynamics of lysosomal-related organelle flashing in the intestinal cells of . bioRxiv : the preprint server for biology\| PubMed ID: 37904973	2023
Semantic representation of neural circuit knowledge in Caenorhabditis elegans. Brain informatics\| PubMed ID: 37947958	2023
Molecular identification of a peroxidase gene controlling body size in the entomopathogenic nematode Steinernema hermaphroditum. Genetics\| PubMed ID: 38078889	2024
Distinct neurogenetic mechanisms establish the same chemosensory valence state at different life stages in Caenorhabditis elegans. G3 (Bethesda, Md.)\| PubMed ID: 38092065	2024
A cGAL-UAS bipartite expression toolkit for sensory neurons. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 38096407	2023
AI-aided geometric design of anti-infection catheters. Science advances\| PubMed ID: 38170782	2024
An improved solid medium-based culturing method for . microPublication biology\| PubMed ID: 38344064	2024
Enrichment on steps, not genes, improves inference of differentially expressed pathways. PLoS computational biology\| PubMed ID: 38527066	2024
WormBase 2024: status and transitioning to Alliance infrastructure. Genetics\| PubMed ID: 38573366	2024
Sensory integration of food availability and population density during the diapause exit decision involves insulin-like signaling in . bioRxiv : the preprint server for biology\| PubMed ID: 38586049	2024
Perspectives on tracking data reuse across biodata resources. Bioinformatics advances\| PubMed ID: 38721398	2024
Correction: Semantic representation of neural circuit knowledge in Caenorhabditis elegans. Brain informatics\| PubMed ID: 38750291	2024
Single-tissue proteomics in reveals proteins resident in intestinal lysosome-related organelles. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 38861598	2024
Expanding automated gene summaries for and parasitic nematode species in WormBase. microPublication biology\| PubMed ID: 39087205	2024