Erin S. Baker

Biological Sciences Division, Pacific Northwest National Laboratory

Affiliated withPacific Northwest National Laboratory

Research Area

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JoVE Journal Publications

ArticleTotal : 1	Year
Publication title Cited by 31	2018

Other Publications

Article	Year
High Resolution Separations and Improved Ion Production and Transmission in Metabolomics. Trends in analytical chemistry : TRAC\| PubMed ID: 19255623	2008
Biases in ion transmission through an electrospray ionization-mass spectrometry capillary inlet. Journal of the American Society for Mass Spectrometry\| PubMed ID: 19815425	2009
Machine learning based prediction for peptide drift times in ion mobility spectrometry. Bioinformatics (Oxford, England)\| PubMed ID: 20495001	2010
Characterization of an Ion Mobility-Multiplexed Collision Induced Dissociation-Tandem Time-of-Flight Mass Spectrometry Approach. International journal of mass spectrometry\| PubMed ID: 20596241	2010
A multi-pronged search for a common structural motif in the secretion signal of Salmonella enterica serovar Typhimurium type III effector proteins. Molecular bioSystems\| PubMed ID: 20877914	2010
Mass spectrometry-based proteomics: existing capabilities and future directions. Chemical Society reviews\| PubMed ID: 22498958	2012
Uterine deletion of Trp53 compromises antioxidant responses in the mouse decidua. Endocrinology\| PubMed ID: 22759378	2012
Evaluation of SDS depletion using an affinity spin column and IMS-MS detection. Proteomics\| PubMed ID: 22936678	2012
Mixed-isotope labeling with LC-IMS-MS for characterization of protein-protein interactions by chemical cross-linking. Journal of the American Society for Mass Spectrometry\| PubMed ID: 23423792	2013
LC-IMS-MS Feature Finder: detecting multidimensional liquid chromatography, ion mobility and mass spectrometry features in complex datasets. Bioinformatics (Oxford, England)\| PubMed ID: 24008421	2013
Improving ion mobility measurement sensitivity by utilizing helium in an ion funnel trap. Analytical chemistry\| PubMed ID: 24786390	2014
Detecting and removing data artifacts in Hadamard transform ion mobility-mass spectrometry measurements. Journal of the American Society for Mass Spectrometry\| PubMed ID: 24796262	2014
Increasing Confidence of LC-MS Identifications by Utilizing Ion Mobility Spectrometry. International journal of mass spectrometry\| PubMed ID: 25089116	2013
Focus on advancing high performance mass spectrometry, honoring dr. Richard d. Smith, recipient of the 2013 award for a distinguished contribution in mass spectrometry. Journal of the American Society for Mass Spectrometry\| PubMed ID: 25326057	2014
Muscle Segment Homeobox Genes Direct Embryonic Diapause by Limiting Inflammation in the Uterus. The Journal of biological chemistry\| PubMed ID: 25931120	2015
Ion Trapping, Storage, and Ejection in Structures for Lossless Ion Manipulations. Analytical chemistry\| PubMed ID: 25971536	2015
Enhancing biological analyses with three dimensional field asymmetric ion mobility, low field drift tube ion mobility and mass spectrometry (μFAIMS/IMS-MS) separations. The Analyst\| PubMed ID: 26140287	2015
Development of a New Ion Mobility (Quadrupole) Time-of-Flight Mass Spectrometer. International journal of mass spectrometry\| PubMed ID: 26185483	2015
Ion manipulations in structures for lossless ion manipulations (SLIM): computational evaluation of a 90° turn and a switch. The Analyst\| PubMed ID: 26289106	2015
Uncovering biologically significant lipid isomers with liquid chromatography, ion mobility spectrometry and mass spectrometry. The Analyst\| PubMed ID: 26734689	2016
Mobility-Selected Ion Trapping and Enrichment Using Structures for Lossless Ion Manipulations. Analytical chemistry\| PubMed ID: 26752262	2016
Surprising impact of remote groups on the folding--unfolding and dimer-chain equilibria of bifunctional H-bonding unimers. Chemical communications (Cambridge, England)\| PubMed ID: 26830456	2016
Mass spectrometry-based monitoring of millisecond protein-ligand binding dynamics using an automated microfluidic platform. Lab on a chip\| PubMed ID: 27009517	2016
Spatial Ion Peak Compression and its Utility in Ion Mobility Spectrometry. Journal of the American Society for Mass Spectrometry\| PubMed ID: 27052738	2016
A Structures for Lossless Ion Manipulations (SLIM) Module for Collision Induced Dissociation. Journal of the American Society for Mass Spectrometry\| PubMed ID: 27098413	2016
Profiling microbial lignocellulose degradation and utilization by emergent omics technologies. Critical reviews in biotechnology\| PubMed ID: 27439855	2017
Achieving High Resolution Ion Mobility Separations Using Traveling Waves in Compact Multiturn Structures for Lossless Ion Manipulations. Analytical chemistry\| PubMed ID: 27479234	2016
Ultra-High Resolution Ion Mobility Separations Utilizing Traveling Waves in a 13 m Serpentine Path Length Structures for Lossless Ion Manipulations Module. Analytical chemistry\| PubMed ID: 27531027	2016
A multi-omic future for microbiome studies. Nature microbiology\| PubMed ID: 27572648	2016
Enhancing glycan isomer separations with metal ions and positive and negative polarity ion mobility spectrometry-mass spectrometry analyses. Analytical and bioanalytical chemistry\| PubMed ID: 27604268	2017
Simultaneous Proteomic Discovery and Targeted Monitoring using Liquid Chromatography, Ion Mobility Spectrometry, and Mass Spectrometry. Molecular & cellular proteomics : MCP\| PubMed ID: 27670688	2016
The fungal cultivar of leaf-cutter ants produces specific enzymes in response to different plant substrates. Molecular ecology\| PubMed ID: 27696597	2016
Greatly Increasing Trapped Ion Populations for Mobility Separations Using Traveling Waves in Structures for Lossless Ion Manipulations. Analytical chemistry\| PubMed ID: 27715008	2016
Integrating ion mobility spectrometry into mass spectrometry-based exposome measurements: what can it add and how far can it go? Bioanalysis\| PubMed ID: 27921453	2017
Squeezing of Ion Populations and Peaks in Traveling Wave Ion Mobility Separations and Structures for Lossless Ion Manipulations Using Compression Ratio Ion Mobility Programming. Analytical chemistry\| PubMed ID: 27934097	2016
Comparing identified and statistically significant lipids and polar metabolites in 15-year old serum and dried blood spot samples for longitudinal studies. Rapid communications in mass spectrometry : RCM\| PubMed ID: 27958645	2017
Lipid and Glycolipid Isomer Analyses Using Ultra-High Resolution Ion Mobility Spectrometry Separations. International journal of molecular sciences\| PubMed ID: 28106768	2017
Development of an Ion Mobility Spectrometry-Orbitrap Mass Spectrometer Platform. Analytical chemistry\| PubMed ID: 28193022	2016
New frontiers for mass spectrometry based upon structures for lossless ion manipulations. The Analyst\| PubMed ID: 28262893	2017
Structural Elucidation of cis/trans Dicaffeoylquinic Acid Photoisomerization Using Ion Mobility Spectrometry-Mass Spectrometry. The journal of physical chemistry letters\| PubMed ID: 28267339	2017
Coupling Front-End Separations, Ion Mobility Spectrometry, and Mass Spectrometry For Enhanced Multidimensional Biological and Environmental Analyses. Annual review of analytical chemistry (Palo Alto, Calif.)\| PubMed ID: 28301728	2017
Identification of Hip BMD Loss and Fracture Risk Markers Through Population-Based Serum Proteomics. Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research\| PubMed ID: 28316103	2017
Serpentine Ultralong Path with Extended Routing (SUPER) High Resolution Traveling Wave Ion Mobility-MS using Structures for Lossless Ion Manipulations. Analytical chemistry\| PubMed ID: 28332832	2017
Characterizing the lipid and metabolite changes associated with placental function and pregnancy complications using ion mobility spectrometry-mass spectrometry and mass spectrometry imaging... Placenta\| PubMed ID: 28392013	2017
Compression Ratio Ion Mobility Programming (CRIMP) Accumulation and Compression of Billions of Ions for Ion Mobility-Mass Spectrometry Using Traveling Waves in Structures for Lossless Ion Ma... Analytical chemistry\| PubMed ID: 28497957	2017
PIXiE: an algorithm for automated ion mobility arrival time extraction and collision cross section calculation using global data association. Bioinformatics (Oxford, England)\| PubMed ID: 28505286	2017
Distinguishing d- and l-aspartic and isoaspartic acids in amyloid β peptides with ultrahigh resolution ion mobility spectrometry. Chemical communications (Cambridge, England)\| PubMed ID: 28654112	2017
Ligand induced structural isomerism in phosphine coordinated gold clusters revealed by ion mobility mass spectrometry. Chemical communications (Cambridge, England)\| PubMed ID: 28660917	2017
An Interlaboratory Evaluation of Drift Tube Ion Mobility-Mass Spectrometry Collision Cross Section Measurements. Analytical chemistry\| PubMed ID: 28763190	2017
Towards Discovery and Targeted Peptide Biomarker Detection Using nanoESI-TIMS-TOF MS. Journal of the American Society for Mass Spectrometry\| PubMed ID: 28889248	2018
Ion Mobility Separations of Isomers based upon Long Path Length Structures for Lossless Ion Manipulations Combined with Mass Spectrometry. ChemistrySelect\| PubMed ID: 28936476	2016
A Customizable Flow Injection System for Automated, High Throughput, and Time Sensitive Ion Mobility Spectrometry and Mass Spectrometry Measurements. Analytical chemistry\| PubMed ID: 29161511	2018
Online Ozonolysis Combined with Ion Mobility-Mass Spectrometry Provides a New Platform for Lipid Isomer Analyses. Analytical chemistry\| PubMed ID: 29220163	2018
Recent advances in lipid separations and structural elucidation using mass spectrometry combined with ion mobility spectrometry, ion-molecule reactions and fragmentation approaches. Current opinion in chemical biology\| PubMed ID: 29223060	2018
SPE-IMS-MS: An automated platform for sub-sixty second surveillance of endogenous metabolites and xenobiotics in biofluids. Clinical mass spectrometry (Del Mar, Calif.)\| PubMed ID: 29276770	2016
High-throughput serum proteomics for the identification of protein biomarkers of mortality in older men. Aging cell\| PubMed ID: 29399943	2018
Editorial overview: Omics. Current opinion in chemical biology\| PubMed ID: 29482723	2018
Evaluating lipid mediator structural complexity using ion mobility spectrometry combined with mass spectrometry. Bioanalysis\| PubMed ID: 29494212	2018
A structural examination and collision cross section database for over 500 metabolites and xenobiotics using drift tube ion mobility spectrometry. Chemical science\| PubMed ID: 29568436	2017
An algorithm to correct saturated mass spectrometry ion abundances for enhanced quantitation and mass accuracy in omic studies. International journal of mass spectrometry\| PubMed ID: 29706793	2018