Blaz Zupan

Computer and Information Science, University of Ljubljana

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JoVE Journal Publications

ArticleTotal : 1	Year
Publication title Cited by 203	2011

Other Publications

Article	Year
GenePath: a system for automated construction of genetic networks from mutant data. Bioinformatics (Oxford, England)\| PubMed ID: 12584124	2003
GenePath: a system for inference of genetic networks and proposal of genetic experiments. Artificial intelligence in medicine\| PubMed ID: 12957783	2003
Microarray data mining with visual programming. Bioinformatics (Oxford, England)\| PubMed ID: 15308546	2005
VizRank: finding informative data projections in functional genomics by machine learning. Bioinformatics (Oxford, England)\| PubMed ID: 15358614	2005
Epistasis analysis with global transcriptional phenotypes. Nature genetics\| PubMed ID: 15821735	2005
TA-clustering: cluster analysis of gene expression profiles through Temporal Abstractions. International journal of medical informatics\| PubMed ID: 15941669	2005
GenePath: from mutations to genetic networks and back. Nucleic acids research\| PubMed ID: 15980576	2005
Developmentally regulated DNA methylation in Dictyostelium discoideum. Eukaryotic cell\| PubMed ID: 16400165	2006
Knowledge-based data analysis and interpretation. Artificial intelligence in medicine\| PubMed ID: 16690309	2006
Predictive data mining in clinical medicine: current issues and guidelines. International journal of medical informatics\| PubMed ID: 17188928	2008
Predictive model for estimating risk of crush syndrome: a data mining approach. The Journal of trauma\| PubMed ID: 17426552	2007
FreeViz--an intelligent multivariate visualization approach to explorative analysis of biomedical data. Journal of biomedical informatics\| PubMed ID: 17531544	2007
Visualization-based cancer microarray data classification analysis. Bioinformatics (Oxford, England)\| PubMed ID: 17586552	2007
Towards knowledge-based gene expression data mining. Journal of biomedical informatics\| PubMed ID: 17683991	2007
Open-source tools for data mining. Clinics in laboratory medicine\| PubMed ID: 18194717	2008
dictyBase--a Dictyostelium bioinformatics resource update. Nucleic acids research\| PubMed ID: 18974179	2009
Polymorphic members of the lag gene family mediate kin discrimination in Dictyostelium. Current biology : CB\| PubMed ID: 19285397	2009
Report on EU-USA workshop: how systems biology can advance cancer research (27 October 2008). Molecular oncology\| PubMed ID: 19383362	2009
dictyExpress: a Dictyostelium discoideum gene expression database with an explorative data analysis web-based interface. BMC bioinformatics\| PubMed ID: 19706156	2009
Does replication groups scoring reduce false positive rate in SNP interaction discovery? BMC genomics\| PubMed ID: 20092660	2010
Conserved developmental transcriptomes in evolutionarily divergent species. Genome biology\| PubMed ID: 20236529	2010
New components of the Dictyostelium PKA pathway revealed by Bayesian analysis of expression data. BMC bioinformatics\| PubMed ID: 20356373	2010
iCLIP reveals the function of hnRNP particles in splicing at individual nucleotide resolution. Nature structural & molecular biology\| PubMed ID: 20601959	2010
Inference of the molecular mechanism of action from genetic interaction and gene expression data. Omics : a journal of integrative biology\| PubMed ID: 20726796	2010
Text Mining approaches for automated literature knowledge extraction and representation. Studies in health technology and informatics\| PubMed ID: 20841825	2010
FragViz: visualization of fragmented networks. BMC bioinformatics\| PubMed ID: 20860802	2010
Biomechanical and clinical alterations of the hip joint following femoral neck fracture and implantation of bipolar hip endoprosthesis. Collegium antropologicum\| PubMed ID: 20977085	2010
iCLIP predicts the dual splicing effects of TIA-RNA interactions. PLoS biology\| PubMed ID: 21048981	2010
Characterizing the RNA targets and position-dependent splicing regulation by TDP-43. Nature neuroscience\| PubMed ID: 21358640	2011
SNPsyn: detection and exploration of SNP-SNP interactions. Nucleic acids research\| PubMed ID: 21576219	2011
miR669a and miR669q prevent skeletal muscle differentiation in postnatal cardiac progenitors. The Journal of cell biology\| PubMed ID: 21708977	2011
Stage prediction of embryonic stem cell differentiation from genome-wide expression data. Bioinformatics (Oxford, England)\| PubMed ID: 21765096	2011
BzpF is a CREB-like transcription factor that regulates spore maturation and stability in Dictyostelium. Developmental biology\| PubMed ID: 21810415	2011
Analysis of alternative splicing associated with aging and neurodegeneration in the human brain. Genome research\| PubMed ID: 21846794	2011