sampling-pretreatment-tooth-enamel-carbonate-for-stable-carbon-oxygen

Sampling and Pretreatment of Tooth Enamel Carbonate for Stable Carbon and Oxygen Isotope Analysis

Stable carbon and oxygen isotope analysis of human and animal tooth enamel carbonate has been applied in paleodietary, paleoecological, and ...

Max Planck Institute for the Science of Human History

Stable isotope analysis of primate tissues in tropical forest contexts is an increasingly popular means of obtaining information about niche distinctions among sympatric species, including preferences in feeding height, forest canopy density, plant parts, and trophism. However, issues of equifinality mean that feeding height, canopy density, as well as the plant parts and plant species consumed, may produce similar or confounding effects. With a few exceptions, researchers have so far relied largely on general principles and/or limited plant data from the study area as references for deducing the predominant drivers of primate isotope variation. Here, we explore variation in the stable carbon (δ C), nitrogen (δ N), and oxygen (δ O) isotope ratios of 288 plant samples identified as important to the three primate species from the Polonnaruwa Nature Sanctuary, Sri Lanka, relative to plant part, season, and canopy height. Our results show that plant part and height have the greatest effect on the δ C and δ O measurements of plants of immediate relevance to the primates, Macaca sinica, Semnopithecus priam thersites, and Trachypithecus vetulus, living in this monsoonal tropical forest. We find no influence of plant part, height or season on the δ N of measured plants. While the plant part effect is particularly pronounced in δ C between fruits and leaves, differential feeding height, and plant taxonomy influence plant δ C and δ O differences in addition to plant organ. Given that species composition in different regions and forest types will differ, the results urge caution in extrapolating general isotopic trends without substantial local baselines studies.

Stable carbon, oxygen, and nitrogen, isotope analysis of plants from a South Asian tropical forest: Implications for primatology.

Sri Lanka has yielded some of the earliest dated fossil evidence for Homo sapiens (∼38-35,000 cal. years BP [calibrated years before present]) in South Asia, within a region that is today covered by tropical rainforest. Archaeozoological and archaeobotanical evidence indicates that these hunter-gatherers exploited tropical forest resources, yet the contribution of these resources to their overall subsistence strategies has, as in other Late Pleistocene rainforest settings, remained relatively unexplored. We build on previous work in this tropical region by applying both bulk and sequential stable carbon and oxygen isotope analysis to human and faunal tooth enamel from the sites of Batadomba-lena, Fa Hien-lena, and Balangoda Kuragala. Tooth enamel preservation was assessed by means of Fourier Transform Infrared Spectroscopy. We use these data to produce a detailed stable isotope ecology for Late Pleistocene-Holocene foragers in Sri Lanka from ∼36-29,000 to 3000 cal. years BP, allowing us to test the degree of human tropical forest resource reliance over a considerable time period. Given that non-human primates dominate the mammalian assemblages at these sites, we also focus on the stable isotope composition of three monkey species in order to study their ecological preferences and, indirectly, human hunting strategies. The results confirm a strong human reliance on tropical forest resources from ∼36-29,000 cal. years BP until the Iron Age ∼3 cal. years BP, while sequential tooth data show that forest resources were exploited year-round. This strategy was maintained through periods of evident environmental change at the Last Glacial Maximum and upon the arrival of agriculture. Long-term tropical forest reliance was supported by the specialised capture of non-human primates, although the isotopic data revealed no evidence for niche distinction between the hunted species. We conclude that humans rapidly developed a specialisation in the exploitation of South Asia's tropical forests following their arrival in this region.

Fruits of the forest: Human stable isotope ecology and rainforest adaptations in Late Pleistocene and Holocene (∼36 to 3 ka) Sri Lanka.

Significant human impacts on tropical forests have been considered the preserve of recent societies, linked to large-scale deforestation, extensive and intensive agriculture, resource mining, livestock grazing and urban settlement. Cumulative archaeological evidence now demonstrates, however, that Homo sapiens has actively manipulated tropical forest ecologies for at least 45,000 years. It is clear that these millennia of impacts need to be taken into account when studying and conserving tropical forest ecosystems today. Nevertheless, archaeology has so far provided only limited practical insight into contemporary human-tropical forest interactions. Here, we review significant archaeological evidence for the impacts of past hunter-gatherers, agriculturalists and urban settlements on global tropical forests. We compare the challenges faced, as well as the solutions adopted, by these groups with those confronting present-day societies, which also rely on tropical forests for a variety of ecosystem services. We emphasize archaeology's importance not only in promoting natural and cultural heritage in tropical forests, but also in taking an active role to inform modern conservation and policy-making.

The deep human prehistory of global tropical forests and its relevance for modern conservation.

The terminal Pleistocene/Holocene boundary (approximately 12-8 thousand years ago) represented a major ecological threshold for humans, both as a significant climate transition and due to the emergence of agriculture around this time. In the highlands of New Guinea, climatic and environmental changes across this period have been highlighted as potential drivers of one of the earliest domestication processes in the world. We present a terminal Pleistocene/Holocene palaeoenvironmental record (12-0 thousand years ago ) of carbon and oxygen isotopes in small mammal tooth enamel from the site of Kiowa. The results show that tropical highland forest and open mosaics, and the human subsistence focused on these environments, remained stable throughout the period in which agriculture emerged at nearby Kuk Swamp. This suggests the persistence of tropical forest foraging among highland New Guinea groups and highlights that agriculture in the region was not adopted as a unilinear or dramatic, forced event but was locally and historically contingent.

Persistent tropical foraging in the highlands of terminal Pleistocene/Holocene New Guinea.

Stable isotope analysis has been utilized in archaeology since the 1970s, yet standardized protocols for terminology, sampling, pretreatment evaluation, calibration, quality assurance and control, data presentation, and graphical or statistical treatment still remain lacking in archaeological applications. Here, we present recommendations and requirements for each of these in the archaeological context of: bulk stable carbon and nitrogen isotope analysis of organics; bulk stable carbon and oxygen isotope analysis of carbonates; single compound stable carbon and nitrogen isotope analysis on amino acids in collagen and keratin; and single compound stable carbon and hydrogen isotope analysis on fatty acids. The protocols are based on recommendations from the Commission on Isotopic Abundances and Atomic Weights of the International Union of Pure and Applied Chemistry (IUPAC) as well as an expanding geochemical and archaeological science experimental literature. We hope that this will provide a useful future reference for authors and reviewers engaging with the growing number of stable isotope applications and datasets in archaeology.

Calling all archaeologists: guidelines for terminology, methodology, data handling, and reporting when undertaking and reviewing stable isotope applications in archaeology.

Recent genomic analyses show that the earliest peoples reaching Remote Oceania-associated with Austronesian-speaking Lapita culture-were almost completely East Asian, without detectable Papuan ancestry. However, Papuan-related genetic ancestry is found across present-day Pacific populations, indicating that peoples from Near Oceania have played a significant, but largely unknown, ancestral role. Here, new genome-wide data from 19 ancient South Pacific individuals provide direct evidence of a so-far undescribed Papuan expansion into Remote Oceania starting ~2,500 yr BP, far earlier than previously estimated and supporting a model from historical linguistics. New genome-wide data from 27 contemporary ni-Vanuatu demonstrate a subsequent and almost complete replacement of Lapita-Austronesian by Near Oceanian ancestry. Despite this massive demographic change, incoming Papuan languages did not replace Austronesian languages. Population replacement with language continuity is extremely rare-if not unprecedented-in human history. Our analyses show that rather than one large-scale event, the process was incremental and complex, with repeated migrations and sex-biased admixture with peoples from the Bismarck Archipelago.

Language continuity despite population replacement in Remote Oceania.

The Middle to Later Stone Age transition in Africa has been debated as a significant shift in human technological, cultural, and cognitive evolution. However, the majority of research on this transition is currently focused on southern Africa due to a lack of long-term, stratified sites across much of the African continent. Here, we report a 78,000-year-long archeological record from Panga ya Saidi, a cave in the humid coastal forest of Kenya. Following a shift in toolkits ~67,000 years ago, novel symbolic and technological behaviors assemble in a non-unilinear manner. Against a backdrop of a persistent tropical forest-grassland ecotone, localized innovations better characterize the Late Pleistocene of this part of East Africa than alternative emphases on dramatic revolutions or migrations.

78,000-year-old record of Middle and Later stone age innovation in an East African tropical forest.

The role of humans in shaping local ecosystems is an increasing focus of archaeological research, yet researchers often lack an appropriate means of measuring past anthropogenic effects on local food webs and nutrient cycling. Stable isotope analysis of commensal animals provides an effective proxy for local human environments because these species are closely associated with human activities without being under direct human management. Such species are thus central to nutrient flows across a range of socionatural environments and can provide insight into how they intersected and transformed over time. Here we measure and compare stable carbon and nitrogen isotope data from Pacific rat () skeletal remains across three Polynesian island systems [Mangareva, Ua Huka (Marquesas), and the Polynesian Outlier of Tikopia] during one of the most significant cases of human migration and commensal introduction in prehistory. The results demonstrate widespread δN declines across these islands that are associated with human land use, intensification, and faunal community restructuring. Local comparison of rat stable isotope data also tracks human activities and resource availability at the level of the settlement. Our results highlight the large-scale restructuring of nutrient flows in island ecosystems that resulted from human colonization and ecosystem engineering activities on Pacific islands. They also demonstrate that stable isotope analysis of often-ignored commensal taxa can provide a tool for tracking human land use and environmental effects.

Restructuring of nutrient flows in island ecosystems following human colonization evidenced by isotopic analysis of commensal rats.

The originally published version of this Article contained an error in Fig. 3, whereby an additional unrelated graph was overlaid on top of the magnetic susceptibility plot. Furthermore, the Article title contained an error in the capitalisation of 'Stone Age'. Both of these errors have now been corrected in both the PDF and HTML versions of the Article.

Article	Year
Stable carbon, oxygen, and nitrogen, isotope analysis of plants from a South Asian tropical forest: Implications for primatology. American journal of primatology\| PubMed ID: 28345759	2017
Fruits of the forest: Human stable isotope ecology and rainforest adaptations in Late Pleistocene and Holocene (∼36 to 3 ka) Sri Lanka. Journal of human evolution\| PubMed ID: 28434535	2017
The deep human prehistory of global tropical forests and its relevance for modern conservation. Nature plants\| PubMed ID: 28770823	2017
The deep human prehistory of global tropical forests and its relevance for modern conservation. Nature plants\| PubMed ID: 28770831	2017
Persistent tropical foraging in the highlands of terminal Pleistocene/Holocene New Guinea. Nature ecology & evolution\| PubMed ID: 28812741	2017
Calling all archaeologists: guidelines for terminology, methodology, data handling, and reporting when undertaking and reviewing stable isotope applications in archaeology. Rapid communications in mass spectrometry : RCM\| PubMed ID: 29235694	2018
Language continuity despite population replacement in Remote Oceania. Nature ecology & evolution\| PubMed ID: 29487365	2018
78,000-year-old record of Middle and Later stone age innovation in an East African tropical forest. Nature communications\| PubMed ID: 29743572	2018
Restructuring of nutrient flows in island ecosystems following human colonization evidenced by isotopic analysis of commensal rats. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 29866832	2018
Publisher Correction: 78,000-year-old record of Middle and Later Stone Age innovation in an East African tropical forest. Nature communications\| PubMed ID: 29872049	2018

Patrick Roberts

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