Yifan Cheng

Department of Biochemistry and Biophysics, University of California San Francisco

Affiliated withUniversity of California San Francisco

Research Area

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JoVE Journal Publications

ArticleTotal : 1	Year
Publication title Cited by 136	2011

Other Publications

Article	Year
The crystal structure of the bifunctional primase-helicase of bacteriophage T7. Molecular cell\| PubMed ID: 14636571	2003
Structure of the human transferrin receptor-transferrin complex. Cell\| PubMed ID: 14980223	2004
A chimeric protein of simian immunodeficiency virus envelope glycoprotein gp140 and Escherichia coli aspartate transcarbamoylase. Journal of virology\| PubMed ID: 15078931	2004
Negative Staining and Image Classification - Powerful Tools in Modern Electron Microscopy. Biological procedures online\| PubMed ID: 15103397	2004
Aquaporin-0 membrane junctions reveal the structure of a closed water pore. Nature\| PubMed ID: 15141214	2004
Aquaporin-0 membrane junctions form upon proteolytic cleavage. Journal of molecular biology\| PubMed ID: 15351655	2004
Molecular model for a complete clathrin lattice from electron cryomicroscopy. Nature\| PubMed ID: 15502812	2004
Structure of an auxilin-bound clathrin coat and its implications for the mechanism of uncoating. Nature\| PubMed ID: 15502813	2004
Structure and different conformational states of native AMPA receptor complexes. Nature\| PubMed ID: 15690046	2005
Lipid-protein interactions in double-layered two-dimensional AQP0 crystals. Nature\| PubMed ID: 16319884	2005
ATP binding to PAN or the 26S ATPases causes association with the 20S proteasome, gate opening, and translocation of unfolded proteins. Molecular cell\| PubMed ID: 16337593	2005
Single particle reconstructions of the transferrin-transferrin receptor complex obtained with different specimen preparation techniques. Journal of molecular biology\| PubMed ID: 16343539	2006
Single particle reconstruction of the human apo-transferrin-transferrin receptor complex. Journal of structural biology\| PubMed ID: 16343946	2005
Three-dimensional structure of an AMPA receptor without associated stargazin/TARP proteins. Biological chemistry\| PubMed ID: 16497150	2006
Structure determination of clathrin coats to subnanometer resolution by single particle cryo-electron microscopy. Journal of structural biology\| PubMed ID: 16908193	2006
Electron tomography of swollen rigor fibers of insect flight muscle reveals a short and variably angled S2 domain. Journal of molecular biology\| PubMed ID: 16949613	2006
Activation of leukocyte beta2 integrins by conversion from bent to extended conformations. Immunity\| PubMed ID: 17045822	2006
Cryo-electron tomography of clathrin-coated vesicles: structural implications for coat assembly. Journal of molecular biology\| PubMed ID: 17095010	2007
Reconstructing the endocytotic machinery. Methods in cell biology\| PubMed ID: 17327169	2007
Docking of the proteasomal ATPases' carboxyl termini in the 20S proteasome's alpha ring opens the gate for substrate entry. Molecular cell\| PubMed ID: 17803938	2007
Structural organization of the anaphase-promoting complex bound to the mitotic activator Slp1. Molecular cell\| PubMed ID: 18082611	2007
Polymorphic assemblies and crystalline arrays of lens tetraspanin MP20. Journal of molecular biology\| PubMed ID: 18166196	2008
In vitro self-assembly of tailorable nanotubes from a simple protein building block. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 18310321	2008
A fusion-intermediate state of HIV-1 gp41 targeted by broadly neutralizing antibodies. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 18322015	2008
Mechanism of gate opening in the 20S proteasome by the proteasomal ATPases. Molecular cell\| PubMed ID: 18471981	2008
Toward an atomic model of the 26S proteasome. Current opinion in structural biology\| PubMed ID: 19286367	2009
A designed angiopoietin-2 variant, pentameric COMP-Ang2, strongly activates Tie2 receptor and stimulates angiogenesis. Biochimica et biophysica acta\| PubMed ID: 19339208	2009
The advent of near-atomic resolution in single-particle electron microscopy. Annual review of biochemistry\| PubMed ID: 19489732	2009
Evaluation of imaging plates as recording medium for images of negatively stained single particles and electron diffraction patterns of two-dimensional crystals. Journal of electron microscopy\| PubMed ID: 19643814	2010
HIV Nef is secreted in exosomes and triggers apoptosis in bystander CD4+ T cells. Traffic (Copenhagen, Denmark)\| PubMed ID: 19912576	2010
Interactions of PAN's C-termini with archaeal 20S proteasome and implications for the eukaryotic proteasome-ATPase interactions. The EMBO journal\| PubMed ID: 20019667	2010
The chromatin remodeller ACF acts as a dimeric motor to space nucleosomes. Nature\| PubMed ID: 20033039	2009
GPU-enabled FREALIGN: accelerating single particle 3D reconstruction and refinement in Fourier space on graphics processors. Journal of structural biology\| PubMed ID: 20558298	2010
HIV Rev response element (RRE) directs assembly of the Rev homooligomer into discrete asymmetric complexes. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 20616058	2010
Structure characterization of the 26S proteasome. Biochimica et biophysica acta\| PubMed ID: 20800708	2011
Collecting electron crystallographic data of two-dimensional protein crystals. Methods in enzymology\| PubMed ID: 20887861	2010
Self-aligning amelogenin nanoribbons in oil-water system. Journal of structural biology\| PubMed ID: 21134461	2011
Direct membrane association drives mitochondrial fission by the Parkinson disease-associated protein alpha-synuclein. The Journal of biological chemistry\| PubMed ID: 21489994	2011
A distributed multi-GPU system for high speed electron microscopic tomographic reconstruction. Ultramicroscopy\| PubMed ID: 21741915	2011
Estrogen, neuroprotection and neurogenesis after ischemic stroke. Current drug targets\| PubMed ID: 22204318	2012
Self-assembly of amelogenin proteins at the water-oil interface. European journal of oral sciences\| PubMed ID: 22243231	2011