Kim K. Hixson

Environmental Molecular Sciences Laboratory, Pacific Northwest National Laboratory

Affiliated withPacific Northwest National Laboratory

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JoVE Journal Publications

ArticleTotal : 1	Year
Publication title Cited by 5	2021

Other Publications

Article	Year
Omic data from evolved E. coli are consistent with computed optimal growth from genome-scale models. Molecular systems biology\| PubMed ID: 20664636	2010
Global analysis of the Deinococcus radiodurans proteome by using accurate mass tags. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 12177431	2002
Evaluation of enzymatic digestion and liquid chromatography-mass spectrometry peptide mapping of the integral membrane protein bacteriorhodopsin. Electrophoresis\| PubMed ID: 12298094	2002
High-efficiency on-line solid-phase extraction coupling to 15-150-microm-i.d. column liquid chromatography for proteomic analysis. Analytical chemistry\| PubMed ID: 14570215	2003
Ultrasensitive proteomics using high-efficiency on-line micro-SPE-nanoLC-nanoESI MS and MS/MS. Analytical chemistry\| PubMed ID: 14697044	2004
Automated 20 kpsi RPLC-MS and MS/MS with chromatographic peak capacities of 1000-1500 and capabilities in proteomics and metabolomics. Analytical chemistry\| PubMed ID: 15889897	2005
Preparation of 20-microm-i.d. silica-based monolithic columns and their performance for proteomics analyses. Analytical chemistry\| PubMed ID: 16053318	2005
More sensitive and quantitative proteomic measurements using very low flow rate porous silica monolithic LC columns with electrospray ionization-mass spectrometry. Journal of proteome research\| PubMed ID: 16674098	2006
AMT tag approach to proteomic characterization of Deinococcus radiodurans and Shewanella oneidensis. Methods of biochemical analysis\| PubMed ID: 16929677	2006
Biomarker candidate identification in Yersinia pestis using organism-wide semiquantitative proteomics. Journal of proteome research\| PubMed ID: 17081052	2006
Proteome-wide identification of proteins and their modifications with decreased ambiguities and improved false discovery rates using unique sequence tags. Analytical chemistry\| PubMed ID: 18271604	2008
Mass spectrometry analysis of proteome-wide proteolytic post-translational degradation of proteins. Analytical chemistry\| PubMed ID: 18578501	2008
Application of pressurized solvents for ultrafast trypsin hydrolysis in proteomics: proteomics on the fly. Journal of proteome research\| PubMed ID: 18605748	2008
Rapid sample processing for LC-MS-based quantitative proteomics using high intensity focused ultrasound. Journal of proteome research\| PubMed ID: 18686986	2008
High sensitivity proteomics assisted discovery of a novel operon involved in the assembly of photosystem II, a membrane protein complex. The Journal of biological chemistry\| PubMed ID: 18693241	2008
De novo sequencing of unique sequence tags for discovery of post-translational modifications of proteins. Analytical chemistry\| PubMed ID: 18783246	2008
Label-free relative quantitation of prokaryotic proteomes using the accurate mass and time tag approach. Methods in molecular biology (Clifton, N.J.)\| PubMed ID: 19241026	2009
On-line digestion system for protein characterization and proteome analysis. Analytical chemistry\| PubMed ID: 19551971	2008
Evaluation of a high-intensity focused ultrasound-immobilized trypsin digestion and 18O-labeling method for quantitative proteomics. Analytical chemistry\| PubMed ID: 19555078	2009
Proteomic detection of non-annotated protein-coding genes in Pseudomonas fluorescens Pf0-1. PloS one\| PubMed ID: 20041161	2009
Establishing the proteome of normal human cerebrospinal fluid. PloS one\| PubMed ID: 20552007	2010
Analyzing protease specificity and detecting in vivo proteolytic events using tandem mass spectrometry. Proteomics\| PubMed ID: 20597098	2010
Pressurized pepsin digestion in proteomics: an automatable alternative to trypsin for integrated top-down bottom-up proteomics. Molecular & cellular proteomics : MCP\| PubMed ID: 20627868	2011
Proteomic and physiological responses of Kineococcus radiotolerans to copper. PloS one\| PubMed ID: 20865147	2010
Genome sequence of the deltaproteobacterial strain NaphS2 and analysis of differential gene expression during anaerobic growth on naphthalene. PloS one\| PubMed ID: 21124915	2010
Quantitative phosphoproteomic analysis of soybean root hairs inoculated with Bradyrhizobium japonicum. Molecular & cellular proteomics : MCP\| PubMed ID: 22843990	2012
Multi-omic data integration links deleted in breast cancer 1 (DBC1) degradation to chromatin remodeling in inflammatory response. Molecular & cellular proteomics : MCP\| PubMed ID: 23639857	2013
A method to determine lysine acetylation stoichiometries. International journal of proteomics\| PubMed ID: 25143833	2014
Proteome of Geobacter sulfurreducens in the presence of U(VI). Microbiology (Reading, England)\| PubMed ID: 25273002	2014
Soybean Roots Grown under Heat Stress Show Global Changes in Their Transcriptional and Proteomic Profiles. Frontiers in plant science\| PubMed ID: 27200004	2016
Defects in the Expression of Chloroplast Proteins Leads to HO Accumulation and Activation of Cyclic Electron Flow around Photosystem I. Frontiers in plant science\| PubMed ID: 28133462	2016
Reduced Arogenate Dehydratase Expression: Ramifications for Photosynthesis and Metabolism. Plant physiology\| PubMed ID: 29523714	2018
Drought delays development of the sorghum root microbiome and enriches for monoderm bacteria. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 29666229	2018
Spatially Resolved Proteome Profiling of <200 Cells from Tomato Fruit Pericarp by Integrating Laser-Capture Microdissection with Nanodroplet Sample Preparation. Analytical chemistry\| PubMed ID: 30118597	2018
Evolution and regulation of nitrogen flux through compartmentalized metabolic networks in a marine diatom. Nature communications\| PubMed ID: 31591397	2019
Top-down mass spectrometry of histone modifications in sorghum reveals potential epigenetic markers for drought acclimation. Methods (San Diego, Calif.)\| PubMed ID: 31655121	2020
The Importance of Protein Phosphorylation for Signaling and Metabolism in Response to Diel Light Cycling and Nutrient Availability in a Marine Diatom. Biology\| PubMed ID: 32640597	2020
Endophyte-Promoted Phosphorus Solubilization in . Frontiers in plant science\| PubMed ID: 33193494	2020
Real-Time Mass Spectrometry Measurements of Respiration Rates in Biological Systems. Journal of the American Society for Mass Spectrometry\| PubMed ID: 33258588	2021