Bruce Fischl

Athinoula A. Martinos Center for Biomedical Imaging, Mass General Brigham

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JoVE Journal Publications

ArticleTotal : 1	Year
Publication title Cited by 168	2012

Other Publications

Article	Year
Whole brain segmentation: automated labeling of neuroanatomical structures in the human brain. Neuron\| PubMed ID: 11832223	2002
The Local Structure of Space-variant Images. Neural networks : the official journal of the International Neural Network Society\| PubMed ID: 12662872	1997
Human cerebellum: surface-assisted cortical parcellation and volumetry with magnetic resonance imaging. Journal of cognitive neuroscience\| PubMed ID: 12803969	2003
Focal thinning of the cerebral cortex in multiple sclerosis. Brain : a journal of neurology\| PubMed ID: 12805100	2003
Regionally localized thinning of the cerebral cortex in schizophrenia. Archives of general psychiatry\| PubMed ID: 12963669	2003
Automatically parcellating the human cerebral cortex. Cerebral cortex (New York, N.Y. : 1991)\| PubMed ID: 14654453	2004
Thinning of the cerebral cortex in aging. Cerebral cortex (New York, N.Y. : 1991)\| PubMed ID: 15054051	2004
A magnetic resonance imaging study of cortical thickness in animal phobia. Biological psychiatry\| PubMed ID: 15110739	2004
Permutation tests for classification: towards statistical significance in image-based studies. Information processing in medical imaging : proceedings of the ... conference\| PubMed ID: 15344469	2003
Sequence-independent segmentation of magnetic resonance images. NeuroImage\| PubMed ID: 15501102	2004
Age does not increase rate of forgetting over weeks--neuroanatomical volumes and visual memory across the adult life-span. Journal of the International Neuropsychological Society : JINS\| PubMed ID: 15686603	2005
Differing neuropsychological and neuroanatomical correlates of abnormal reading in early-stage semantic dementia and dementia of the Alzheimer type. Neuropsychologia\| PubMed ID: 15716156	2005
Cortical volume and speed-of-processing are complementary in prediction of performance intelligence. Neuropsychologia\| PubMed ID: 15721183	2005
Detection of entorhinal layer II using 7Tesla [corrected] magnetic resonance imaging. Annals of neurology\| PubMed ID: 15786476	2005
On-line automatic slice positioning for brain MR imaging. NeuroImage\| PubMed ID: 15886023	2005
Location and spatial profile of category-specific regions in human extrastriate cortex. Human brain mapping\| PubMed ID: 15966002	2006
Quantitative evaluation of automated skull-stripping methods applied to contemporary and legacy images: effects of diagnosis, bias correction, and slice location. Human brain mapping\| PubMed ID: 15986433	2006
Effects of age on volumes of cortex, white matter and subcortical structures. Neurobiology of aging\| PubMed ID: 16005549	2005
Thickness of ventromedial prefrontal cortex in humans is correlated with extinction memory. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 16024728	2005
Aids to telemetry in the presurgical evaluation of epilepsy patients: MRI, MEG and other non-invasive imaging techniques. Supplements to Clinical neurophysiology\| PubMed ID: 16106650	2004
Selective increase of cortical thickness in high-performing elderly--structural indices of optimal cognitive aging. NeuroImage\| PubMed ID: 16176876	2006
Meditation experience is associated with increased cortical thickness. Neuroreport\| PubMed ID: 16272874	2005
Orbitofrontal thickness, retention of fear extinction, and extraversion. Neuroreport\| PubMed ID: 16272877	2005
Reliability in multi-site structural MRI studies: effects of gradient non-linearity correction on phantom and human data. NeuroImage\| PubMed ID: 16300968	2006
Comparison of manual and automatic section positioning of brain MR images. Radiology\| PubMed ID: 16507753	2006
An automated labeling system for subdividing the human cerebral cortex on MRI scans into gyral based regions of interest. NeuroImage\| PubMed ID: 16530430	2006
Regional cortical thickness matters in recall after months more than minutes. NeuroImage\| PubMed ID: 16540346	2006
The functional and structural significance of the frontal shift in the old/new ERP effect. Brain research\| PubMed ID: 16542641	2006
Reliability of MRI-derived measurements of human cerebral cortical thickness: the effects of field strength, scanner upgrade and manufacturer. NeuroImage\| PubMed ID: 16651008	2006
Mapping an intrinsic MR property of gray matter in auditory cortex of living humans: a possible marker for primary cortex and hemispheric differences. NeuroImage\| PubMed ID: 16806989	2006
Detailed semiautomated MRI based morphometry of the neonatal brain: preliminary results. NeuroImage\| PubMed ID: 16857388	2006
Human cerebral cortex: a system for the integration of volume- and surface-based representations. NeuroImage\| PubMed ID: 16920366	2006
A technique for the deidentification of structural brain MR images. Human brain mapping\| PubMed ID: 17295313	2007
Neural activity is modulated by trial history: a functional magnetic resonance imaging study of the effects of a previous antisaccade. The Journal of neuroscience : the official journal of the Society for Neuroscience\| PubMed ID: 17301186	2007
A genetic algorithm for the topology correction of cortical surfaces. Information processing in medical imaging : proceedings of the ... conference\| PubMed ID: 17354712	2005
Cortical atrophy is relevant in multiple sclerosis at clinical onset. Journal of neurology\| PubMed ID: 17361339	2007
Cognitive function, P3a/P3b brain potentials, and cortical thickness in aging. Human brain mapping\| PubMed ID: 17370342	2007
Changes in cerebral cortex of children treated for medulloblastoma. International journal of radiation oncology, biology, physics\| PubMed ID: 17379433	2007
Atlas renormalization for improved brain MR image segmentation across scanner platforms. IEEE transactions on medical imaging\| PubMed ID: 17427735	2007
Geometrically accurate topology-correction of cortical surfaces using nonseparating loops. IEEE transactions on medical imaging\| PubMed ID: 17427739	2007
Cortical surface shape analysis based on spherical wavelets. IEEE transactions on medical imaging\| PubMed ID: 17427744	2007
Abnormal cortical folding patterns within Broca's area in schizophrenia: evidence from structural MRI. Schizophrenia research\| PubMed ID: 17490861	2007
Reduced microstructural integrity of the white matter underlying anterior cingulate cortex is associated with increased saccadic latency in schizophrenia. NeuroImage\| PubMed ID: 17590354	2007
Phase maps reveal cortical architecture. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 17609374	2007
Geometry driven volumetric registration. Information processing in medical imaging : proceedings of the ... conference\| PubMed ID: 17633739	2007
A role for the human dorsal anterior cingulate cortex in fear expression. Biological psychiatry\| PubMed ID: 17707349	2007
Heritability of brain morphology related to schizophrenia: a large-scale automated magnetic resonance imaging segmentation study. Biological psychiatry\| PubMed ID: 17727823	2008
An MRI-based method for measuring volume, thickness and surface area of entorhinal, perirhinal, and posterior parahippocampal cortex. Neurobiology of aging\| PubMed ID: 17850926	2009
Differential effects of aging and Alzheimer's disease on medial temporal lobe cortical thickness and surface area. Neurobiology of aging\| PubMed ID: 17869384	2009
Feasibility of multi-site clinical structural neuroimaging studies of aging using legacy data. Neuroinformatics\| PubMed ID: 17999200	2007
Effects of registration regularization and atlas sharpness on segmentation accuracy. Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention\| PubMed ID: 18051118	2007
Accurate prediction of V1 location from cortical folds in a surface coordinate system. NeuroImage\| PubMed ID: 18055222	2008
Cortical folding patterns and predicting cytoarchitecture. Cerebral cortex (New York, N.Y. : 1991)\| PubMed ID: 18079129	2008
Brain morphometry with multiecho MPRAGE. NeuroImage\| PubMed ID: 18242102	2008
The effect of early human diet on caudate volumes and IQ. Pediatric research\| PubMed ID: 18287970	2008
The intrinsic shape of human and macaque primary visual cortex. Cerebral cortex (New York, N.Y. : 1991)\| PubMed ID: 18308709	2008
Cerebral cortex and the clinical expression of Huntington's disease: complexity and heterogeneity. Brain : a journal of neurology\| PubMed ID: 18337273	2008
The relationship between diffusion tensor imaging and volumetry as measures of white matter properties. NeuroImage\| PubMed ID: 18620064	2008
The cortical signature of Alzheimer's disease: regionally specific cortical thinning relates to symptom severity in very mild to mild AD dementia and is detectable in asymptomatic amyloid-po... Cerebral cortex (New York, N.Y. : 1991)\| PubMed ID: 18632739	2009
Effects of registration regularization and atlas sharpness on segmentation accuracy. Medical image analysis\| PubMed ID: 18667352	2008
Collaborative computational anatomy: an MRI morphometry study of the human brain via diffeomorphic metric mapping. Human brain mapping\| PubMed ID: 18781592	2009
Model-based segmentation of hippocampal subfields in ultra-high resolution in vivo MRI. Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention\| PubMed ID: 18979753	2008
Shape analysis with overcomplete spherical wavelets. Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention\| PubMed ID: 18979780	2008
Spherical demons: fast surface registration. Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention\| PubMed ID: 18979813	2008
Regional white matter volume differences in nondemented aging and Alzheimer's disease. NeuroImage\| PubMed ID: 19027860	2009
High consistency of regional cortical thinning in aging across multiple samples. Cerebral cortex (New York, N.Y. : 1991)\| PubMed ID: 19150922	2009
MRI-derived measurements of human subcortical, ventricular and intracranial brain volumes: Reliability effects of scan sessions, acquisition sequences, data analyses, scanner upgrade, scanne... NeuroImage\| PubMed ID: 19233293	2009
Combined volumetric and surface registration. IEEE transactions on medical imaging\| PubMed ID: 19273000	2009
Distinct genetic influences on cortical surface area and cortical thickness. Cerebral cortex (New York, N.Y. : 1991)\| PubMed ID: 19299253	2009
Locating the functional and anatomical boundaries of human primary visual cortex. NeuroImage\| PubMed ID: 19328238	2009
Predicting the location of entorhinal cortex from MRI. NeuroImage\| PubMed ID: 19376238	2009
Target-specific contrast agents for magnetic resonance microscopy. NeuroImage\| PubMed ID: 19385012	2009
Fully-automated, multi-stage hippocampus mapping in very mild Alzheimer disease. Hippocampus\| PubMed ID: 19405129	2009
Automated segmentation of hippocampal subfields from ultra-high resolution in vivo MRI. Hippocampus\| PubMed ID: 19405131	2009
Widespread reductions of cortical thickness in schizophrenia and spectrum disorders and evidence of heritability. Archives of general psychiatry\| PubMed ID: 19414706	2009
Cognitive function and brain structure correlations in healthy elderly East Asians. NeuroImage\| PubMed ID: 19457386	2009
Automated MRI measures identify individuals with mild cognitive impairment and Alzheimer's disease. Brain : a journal of neurology\| PubMed ID: 19460794	2009
Increased sensitivity to effects of normal aging and Alzheimer's disease on cortical thickness by adjustment for local variability in gray/white contrast: a multi-sample MRI study. NeuroImage\| PubMed ID: 19501655	2009
Consistent neuroanatomical age-related volume differences across multiple samples. Neurobiology of aging\| PubMed ID: 19570593	2011
Accurate and robust brain image alignment using boundary-based registration. NeuroImage\| PubMed ID: 19573611	2009
Minute effects of sex on the aging brain: a multisample magnetic resonance imaging study of healthy aging and Alzheimer's disease. The Journal of neuroscience : the official journal of the Society for Neuroscience\| PubMed ID: 19587284	2009
Anatomical atlas-guided diffuse optical tomography of brain activation. NeuroImage\| PubMed ID: 19643185	2010
Segmental brain volumes and cognitive and perceptual correlates in 15-year-old adolescents with low birth weight. The Journal of pediatrics\| PubMed ID: 19683725	2009
Spherical demons: fast diffeomorphic landmark-free surface registration. IEEE transactions on medical imaging\| PubMed ID: 19709963	2010
Genetic and environmental influences on the size of specific brain regions in midlife: the VETSA MRI study. NeuroImage\| PubMed ID: 19786105	2010
Altered white matter microstructure in the corpus callosum in Huntington's disease: implications for cortical "disconnection". NeuroImage\| PubMed ID: 19850138	2010
Cortical thickness is influenced by regionally specific genetic factors. Biological psychiatry\| PubMed ID: 19963208	2010
Impact of breast milk on intelligence quotient, brain size, and white matter development. Pediatric research\| PubMed ID: 20035247	2010
Evaluation of volume-based and surface-based brain image registration methods. NeuroImage\| PubMed ID: 20123029	2010
Atlas generation for subcortical and ventricular structures with its applications in shape analysis. IEEE transactions on image processing : a publication of the IEEE Signal Processing Society\| PubMed ID: 20129863	2010
Improved tractography alignment using combined volumetric and surface registration. NeuroImage\| PubMed ID: 20153833	2010
Salivary cortisol and prefrontal cortical thickness in middle-aged men: A twin study. NeuroImage\| PubMed ID: 20156572	2010
Heritability of brain ventricle volume: converging evidence from inconsistent results. Neurobiology of aging\| PubMed ID: 20363053	2012
Task-optimal registration cost functions. Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention\| PubMed ID: 20426037	2009
Supervised nonparametric image parcellation. Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention\| PubMed ID: 20426218	2009
Laminar analysis of 7T BOLD using an imposed spatial activation pattern in human V1. NeuroImage\| PubMed ID: 20460157	2010
Learning task-optimal registration cost functions for localizing cytoarchitecture and function in the cerebral cortex. IEEE transactions on medical imaging\| PubMed ID: 20529736	2010
Automatic parcellation of human cortical gyri and sulci using standard anatomical nomenclature. NeuroImage\| PubMed ID: 20547229	2010
A generative model for image segmentation based on label fusion. IEEE transactions on medical imaging\| PubMed ID: 20562040	2010
Automated MRI measures predict progression to Alzheimer's disease. Neurobiology of aging\| PubMed ID: 20570399	2010
Genetic patterns of correlation among subcortical volumes in humans: results from a magnetic resonance imaging twin study. Human brain mapping\| PubMed ID: 20572207	2011
Direct visualization of the perforant pathway in the human brain with ex vivo diffusion tensor imaging. Frontiers in human neuroscience\| PubMed ID: 20577631	2010
Evaluating the validity of volume-based and surface-based brain image registration for developmental cognitive neuroscience studies in children 4 to 11 years of age. NeuroImage\| PubMed ID: 20621657	2010
Highly accurate inverse consistent registration: a robust approach. NeuroImage\| PubMed ID: 20637289	2010
Toward implementing an MRI-based PET attenuation-correction method for neurologic studies on the MR-PET brain prototype. Journal of nuclear medicine : official publication, Society of Nuclear Medicine\| PubMed ID: 20810759	2010
Nonparametric Mixture Models for Supervised Image Parcellation. Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention\| PubMed ID: 20814584	2009
Selective disruption of the cerebral neocortex in Alzheimer's disease. PloS one\| PubMed ID: 20886094	2010
Thickness of the human cerebral cortex is associated with metrics of cerebrovascular health in a normative sample of community dwelling older adults. NeuroImage\| PubMed ID: 21035552	2011
Brain structure correlates of individual differences in the acquisition and inhibition of conditioned fear. Cerebral cortex (New York, N.Y. : 1991)\| PubMed ID: 21263037	2011
Avoiding asymmetry-induced bias in longitudinal image processing. NeuroImage\| PubMed ID: 21376812	2011
Genetic and environmental contributions to regional cortical surface area in humans: a magnetic resonance imaging twin study. Cerebral cortex (New York, N.Y. : 1991)\| PubMed ID: 21378112	2011
Connectivity-based segmentation of human amygdala nuclei using probabilistic tractography. NeuroImage\| PubMed ID: 21396459	2011
Amyloid-Î² associated cortical thinning in clinically normal elderly. Annals of neurology\| PubMed ID: 21437929	2011
A tale of two factors: what determines the rate of progression in Huntington's disease? A longitudinal MRI study. Movement disorders : official journal of the Movement Disorder Society\| PubMed ID: 21611979	2011
The organization of the human cerebral cortex estimated by intrinsic functional connectivity. Journal of neurophysiology\| PubMed ID: 21653723	2011
The dynamics of cortical and hippocampal atrophy in Alzheimer disease. Archives of neurology\| PubMed ID: 21825241	2011
Presence of ApoE Îµ4 allele associated with thinner frontal cortex in middle age. Journal of Alzheimer's disease : JAD\| PubMed ID: 21971450	2011
Genetic influences on hippocampal volume differ as a function of testosterone level in middle-aged men. NeuroImage\| PubMed ID: 21983185	2012
Automated probabilistic reconstruction of white-matter pathways in health and disease using an atlas of the underlying anatomy. Frontiers in neuroinformatics\| PubMed ID: 22016733	2011
Genetic influences on cortical regionalization in the human brain. Neuron\| PubMed ID: 22099457	2011
Entorhinal verrucae geometry is coincident and correlates with Alzheimer's lesions: a combined neuropathology and high-resolution ex vivo MRI analysis. Acta neuropathologica\| PubMed ID: 22160360	2012
The Association between a Polygenic Alzheimer Score and Cortical Thickness in Clinically Normal Subjects. Cerebral cortex (New York, N.Y. : 1991)\| PubMed ID: 22169231	2011
Volumetric navigators for prospective motion correction and selective reacquisition in neuroanatomical MRI. Magnetic resonance in medicine : official journal of the Society of Magnetic Resonance in Medicine / Society of Magnetic Resonance in Medicine\| PubMed ID: 22213578	2011
FreeSurfer. NeuroImage\| PubMed ID: 22248573	2012
Atlas-based segmentation for globus pallidus internus targeting on low-resolution MRI. Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference\| PubMed ID: 22255635	2011