Jerry L. Prince

Department of Electrical and Computer Engineering, The Johns Hopkins University

Affiliated withThe Johns Hopkins University

Research Area

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JoVE Journal Publications

ArticleTotal : 1	Year
Publication title Cited by 22	2022

Other Publications

Article	Year
Cardiac motion tracking using CINE harmonic phase (HARP) magnetic resonance imaging. Magnetic resonance in medicine\| PubMed ID: 10571926	1999
Cortical reconstruction using implicit surface evolution: accuracy and precision analysis. NeuroImage\| PubMed ID: 16269250	2006
Measuring tongue motion from tagged cine-MRI using harmonic phase (HARP) processing. The Journal of the Acoustical Society of America\| PubMed ID: 17297803	2007
Effects of diffusion weighting schemes on the reproducibility of DTI-derived fractional anisotropy, mean diffusivity, and principal eigenvector measurements at 1.5T. NeuroImage\| PubMed ID: 17532649	2007
Effects of signal-to-noise ratio on the accuracy and reproducibility of diffusion tensor imaging-derived fractional anisotropy, mean diffusivity, and principal eigenvector measurements at 1.... Journal of magnetic resonance imaging : JMRI\| PubMed ID: 17729339	2007
Diffusion tensor imaging at low SNR: nonmonotonic behaviors of tensor contrasts. Magnetic resonance imaging\| PubMed ID: 18499378	2008
Effect of oral appliances on genioglossus muscle tonicity seen with diffusion tensor imaging: a pilot study. Oral surgery, oral medicine, oral pathology, oral radiology, and endodontics\| PubMed ID: 19217012	2009
Robust deformable image registration using prior shape information for atlas to patient registration. Computerized medical imaging and graphics : the official journal of the Computerized Medical Imaging Society\| PubMed ID: 19515532	2010
Mjolnir: extending HAMMER using a diffusion transformation model and histogram equalization for deformable image registration. International journal of biomedical imaging\| PubMed ID: 19680457	2009
AUTOMATICALLY IDENTIFYING WHITE MATTER TRACTS USING CORTICAL LABELS. Proceedings. IEEE International Symposium on Biomedical Imaging\| PubMed ID: 20119500	2008
A RICIAN MIXTURE MODEL CLASSIFICATION ALGORITHM FOR MAGNETIC RESONANCE IMAGES. Proceedings. IEEE International Symposium on Biomedical Imaging\| PubMed ID: 20126426	2009
FUZZY C-MEANS WITH VARIABLE COMPACTNESS. Proceedings. IEEE International Symposium on Biomedical Imaging\| PubMed ID: 20126427	2008
Diffusion tensor imaging reveals disease-specific deep cerebellar nuclear changes in cerebellar degeneration. Journal of neurology\| PubMed ID: 20354716	2010
Synthesizing MR Contrast and Resolution through a Patch Matching Technique. Proceedings of SPIE--the International Society for Optical Engineering\| PubMed ID: 20431709	2010
Longitudinal changes in cortical thickness associated with normal aging. NeuroImage\| PubMed ID: 20441796	2010
Hybrid cone-beam tomographic reconstruction: incorporation of prior anatomical models to compensate for missing data. IEEE transactions on medical imaging\| PubMed ID: 20667807	2011
Multi-parametric neuroimaging reproducibility: a 3-T resource study. NeuroImage\| PubMed ID: 21094686	2011
MR CONTRAST SYNTHESIS FOR LESION SEGMENTATION. Proceedings. IEEE International Symposium on Biomedical Imaging\| PubMed ID: 21132059	2010
AUTOMATED RELIABLE LABELING OF THE CORTICAL SURFACE. Proceedings. IEEE International Symposium on Biomedical Imaging\| PubMed ID: 21197379	2008
Simple paradigm for extra-cerebral tissue removal: algorithm and analysis. NeuroImage\| PubMed ID: 21458576	2011
MRI shows a region-specific pattern of atrophy in spinocerebellar ataxia type 2. Cerebellum (London, England)\| PubMed ID: 21850525	2012
Resolution of crossing fibers with constrained compressed sensing using diffusion tensor MRI. NeuroImage\| PubMed ID: 22019877	2012
Enhancement of mobile C-arm cone-beam reconstruction using prior anatomical models. Proceedings of SPIE--the International Society for Optical Engineering\| PubMed ID: 22190841	2009
Principal component analysis of cerebellar shape on MRI separates SCA types 2 and 6 into two archetypal modes of degeneration. Cerebellum (London, England)\| PubMed ID: 22258915	2012
System for integrated neuroimaging analysis and processing of structure. Neuroinformatics\| PubMed ID: 22932976	2013
Distance Transforms in Multi Channel MR Image Registration. Proceedings of SPIE--the International Society for Optical Engineering\| PubMed ID: 23503332	2011
Segmentation of retinal OCT images using a random forest classifier. Proceedings of SPIE--the International Society for Optical Engineering\| PubMed ID: 23710325	2013
Retinal layer segmentation of macular OCT images using boundary classification. Biomedical optics express\| PubMed ID: 23847738	2013
Automatic magnetic resonance spinal cord segmentation with topology constraints for variable fields of view. NeuroImage\| PubMed ID: 23927903	2013
THALAMIC PARCELLATION FROM MULTI-MODAL DATA USING RANDOM FOREST LEARNING. Proceedings. IEEE International Symposium on Biomedical Imaging\| PubMed ID: 24145869	2013
AUTOMATED ANATOMICAL LABELING OF THE CEREBRAL ARTERIES USING BELIEF PROPAGATION. Proceedings of SPIE--the International Society for Optical Engineering\| PubMed ID: 24236229	2013
COVARIANCE SHRINKING IN ACTIVE SHAPE MODELS WITH APPLICATION TO GYRAL LABELING OF THE CEREBRAL CORTEX. Proceedings. IEEE International Symposium on Biomedical Imaging\| PubMed ID: 24301715	2013
Longitudinal Intensity Normalization of Magnetic Resonance Images using Patches. Proceedings of SPIE--the International Society for Optical Engineering\| PubMed ID: 24382991	2013
Pulse Sequence based Multi-acquisition MR Intensity Normalization. Proceedings of SPIE--the International Society for Optical Engineering\| PubMed ID: 24386545	2013
COMPRESSED SENSING BASED INTENSITY NON-UNIFORMITY CORRECTION. Proceedings. IEEE International Symposium on Biomedical Imaging\| PubMed ID: 24443667	2011
PATCH BASED INTENSITY NORMALIZATION OF BRAIN MR IMAGES. Proceedings. IEEE International Symposium on Biomedical Imaging\| PubMed ID: 24443685	2013
MAGNETIC RESONANCE IMAGE SYNTHESIS THROUGH PATCH REGRESSION. Proceedings. IEEE International Symposium on Biomedical Imaging\| PubMed ID: 24443686	2013
DEFORMABLE REGISTRATION OF MACULAR OCT USING A-MODE SCAN SIMILARITY. Proceedings / IEEE International Symposium on Biomedical Imaging: from nano to macro. IEEE International Symposium on Biomedical Imaging\| PubMed ID: 24443687	2013
Multiple-object geometric deformable model for segmentation of macular OCT. Biomedical optics express\| PubMed ID: 24761289	2014
LONGITUDINAL INTENSITY NORMALIZATION IN THE PRESENCE OF MULTIPLE SCLEROSIS LESIONS. Proceedings. IEEE International Symposium on Biomedical Imaging\| PubMed ID: 24816891	2013
MR to CT Registration of Brains using Image Synthesis. Proceedings of SPIE--the International Society for Optical Engineering\| PubMed ID: 25057341	2014
Analysis of macular OCT images using deformable registration. Biomedical optics express\| PubMed ID: 25071959	2014
Intensity Inhomogeneity Correction of Magnetic Resonance Images using Patches. Proceedings of SPIE--the International Society for Optical Engineering\| PubMed ID: 25077011	2011
Semi-automatic segmentation for 3D motion analysis of the tongue with dynamic MRI. Computerized medical imaging and graphics : the official journal of the Computerized Medical Imaging Society\| PubMed ID: 25155697	2014
Automatic method for thalamus parcellation using multi-modal feature classification. Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention\| PubMed ID: 25320796	2014
IMPROVING MAGNETIC RESONANCE RESOLUTION WITH SUPERVISED LEARNING. Proceedings. IEEE International Symposium on Biomedical Imaging\| PubMed ID: 25405001	2014
RANDOM FOREST FLAIR RECONSTRUCTION FROM , , AND -WEIGHTED MRI. Proceedings. IEEE International Symposium on Biomedical Imaging\| PubMed ID: 25405002	2014
Automatic segmentation of microcystic macular edema in OCT. Biomedical optics express\| PubMed ID: 25657884	2015
Longitudinal graph-based segmentation of macular OCT using fundus alignment. Proceedings of SPIE--the International Society for Optical Engineering\| PubMed ID: 26023248	2015
Segmentation of microcystic macular edema in Cirrus OCT scans with an exploratory longitudinal study. Proceedings of SPIE--the International Society for Optical Engineering\| PubMed ID: 26023249	2015
MR image synthesis by contrast learning on neighborhood ensembles. Medical image analysis\| PubMed ID: 26072167	2015
Tree-Encoded Conditional Random Fields for Image Synthesis. Information processing in medical imaging : proceedings of the ... conference\| PubMed ID: 26221716	2015
Using image synthesis for multi-channel registration of different image modalities. Proceedings of SPIE--the International Society for Optical Engineering\| PubMed ID: 26246653	2015
Subject-Specific Sparse Dictionary Learning for Atlas-Based Brain MRI Segmentation. IEEE journal of biomedical and health informatics\| PubMed ID: 26340685	2015
Automated cerebellar lobule segmentation with application to cerebellar structural analysis in cerebellar disease. NeuroImage\| PubMed ID: 26408861	2016
Realistic analytical polyhedral MRI phantoms. Magnetic resonance in medicine\| PubMed ID: 26479724	2016
Segmentation and labeling of the ventricular system in normal pressure hydrocephalus using patch-based tissue classification and multi-atlas labeling. Proceedings of SPIE--the International Society for Optical Engineering\| PubMed ID: 27199501	2016
Simultaneous Segmentation of Retinal Surfaces and Microcystic Macular Edema in SDOCT Volumes. Proceedings of SPIE--the International Society for Optical Engineering\| PubMed ID: 27199502	2016
Combined registration and motion correction of longitudinal retinal OCT data. Proceedings of SPIE--the International Society for Optical Engineering\| PubMed ID: 27231406	2016
Longitudinal Patch-Based Segmentation of Multiple Sclerosis White Matter Lesions. Machine learning in medical imaging. MLMI (Workshop)\| PubMed ID: 27570846	2015
Random forest regression for magnetic resonance image synthesis. Medical image analysis\| PubMed ID: 27607469	2017
Multi-Output Decision Trees for Lesion Segmentation in Multiple Sclerosis. Proceedings of SPIE--the International Society for Optical Engineering\| PubMed ID: 27695155	2015
INTENSITY INHOMOGENEITY CORRECTION OF MACULAR OCT USING N3 AND RETINAL FLATSPACE. Proceedings. IEEE International Symposium on Biomedical Imaging\| PubMed ID: 27695603	2016
An adaptive grid for graph-based segmentation in retinal OCT. Proceedings of SPIE--the International Society for Optical Engineering\| PubMed ID: 27773959	2014
Effects of Spatial Resolution on Image Registration. Proceedings of SPIE--the International Society for Optical Engineering\| PubMed ID: 27773960	2016
Cross contrast multi-channel image registration using image synthesis for MR brain images. Medical image analysis\| PubMed ID: 27816859	2017
Longitudinal multiple sclerosis lesion segmentation: Resource and challenge. NeuroImage\| PubMed ID: 28087490	2017
A toolbox to visually explore cerebellar shape changes in cerebellar disease and dysfunction. Proceedings of SPIE--the International Society for Optical Engineering\| PubMed ID: 28479655	2016
Longitudinal multiple sclerosis lesion segmentation data resource. Data in brief\| PubMed ID: 28491937	2017
Thalamus segmentation using multi-modal feature classification: Validation and pilot study of an age-matched cohort. NeuroImage\| PubMed ID: 28669906	2017
Improving graph-based OCT segmentation for severe pathology in Retinitis Pigmentosa patients. Proceedings of SPIE--the International Society for Optical Engineering\| PubMed ID: 28781413	2017
Automated segmentation of mouse OCT volumes (ASiMOV): Validation & clinical study of a light damage model. PloS one\| PubMed ID: 28817571	2017
Collaborative SDOCT Segmentation and Analysis Software. Proceedings of SPIE--the International Society for Optical Engineering\| PubMed ID: 28919660	2017
Efficient Multi-Atlas Registration using an Intermediate Template Image. Proceedings of SPIE--the International Society for Optical Engineering\| PubMed ID: 28943702	2017
Intensity inhomogeneity correction of SD-OCT data using macular flatspace. Medical image analysis\| PubMed ID: 29040910	2018
Whole Brain Parcellation with Pathology: Validation on Ventriculomegaly Patients. Patch-based techniques in medical imaging : third International Workshop, Patch-MI 2017, held in conjunction with MICCAI 2017, Quebec City, QC, Canada, September 14, 2017, Proceedings. Patch-MI (Workshop) (3rd : 2017 : Quebec, Quebec)\| PubMed ID: 29459902	2017
Dice Overlap Measures for Objects of Unknown Number: Application to Lesion Segmentation. Brainlesion : glioma, multiple sclerosis, stroke and traumatic brain injuries. BrainLes (Workshop)\| PubMed ID: 29714358	2018
State-of-the-Art Digital Imaging in Dentistry: Advanced Research of MRI, CT, CBCT, and Digital Intraoral Imaging. BioMed research international\| PubMed ID: 29854807	2018
Comparing fully automated state-of-the-art cerebellum parcellation from magnetic resonance images. NeuroImage\| PubMed ID: 30099076	2018
A supervoxel based random forest synthesis framework for bidirectional MR/CT synthesis. Simulation and synthesis in medical imaging : ... International Workshop, SASHIMI ..., held in conjunction with MICCAI ..., proceedings. SASHIMI (Workshop)\| PubMed ID: 30221260	2017
Retinal layer parcellation of optical coherence tomography images: Data resource for multiple sclerosis and healthy controls. Data in brief\| PubMed ID: 30671506	2019
Layer boundary evolution method for macular OCT layer segmentation. Biomedical optics express\| PubMed ID: 30891330	2019
Alterations in the retinal vasculature occur in multiple sclerosis and exhibit novel correlations with disability and visual function measures. Multiple sclerosis (Houndmills, Basingstoke, England)\| PubMed ID: 31094280	2020
Brain ventricle parcellation using a deep neural network: Application to patients with ventriculomegaly. NeuroImage. Clinical\| PubMed ID: 31174103	2019
DeepHarmony: A deep learning approach to contrast harmonization across scanner changes. Magnetic resonance imaging\| PubMed ID: 31301354	2019
Towards Topological Correct Segmentation of Macular OCT from Cascaded FCNs. Fetal, Infant and Ophthalmic Medical Image Analysis : International Workshop, FIFI 2017 and 4th International Workshop, OMIA 2017, Held in Conjunction with MICCAI 2017, Quebec City, QC, Canada, September 14, 2017. FIFI (Workshop) (2017 ...\| PubMed ID: 31355372	2017
Deep learning based topology guaranteed surface and MME segmentation of multiple sclerosis subjects from retinal OCT. Biomedical optics express\| PubMed ID: 31646029	2019
Multi-layer Fast Level Set Segmentation for Macular OCT. Proceedings. IEEE International Symposium on Biomedical Imaging\| PubMed ID: 31853331	2018
Fully Convolutional Boundary Regression for Retina OCT Segmentation. Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention\| PubMed ID: 31853524	2019
Association of body mass index with longitudinal rates of retinal atrophy in multiple sclerosis. Multiple sclerosis (Houndmills, Basingstoke, England)\| PubMed ID: 32297826	2020
Cerebellum Parcellation with Convolutional Neural Networks. Proceedings of SPIE--the International Society for Optical Engineering\| PubMed ID: 32394999	2019
Hierarchical Parcellation of the Cerebellum. Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention\| PubMed ID: 32399521	2019
Evaluating White Matter Lesion Segmentations with Refined Sørensen-Dice Analysis. Scientific reports\| PubMed ID: 32427874	2020
Automatic cerebellum anatomical parcellation using U-Net with locally constrained optimization. NeuroImage\| PubMed ID: 32438049	2020
Longitudinal analysis of regional cerebellum volumes during normal aging. NeuroImage\| PubMed ID: 32592850	2020
Shortcomings of Ventricle Segmentation Using Deep Convolutional Networks. Understanding and interpreting machine learning in medical image computing applications : first International Workshops, MLCN 2018, DLF 2018, and iMIMIC 2018, held in conjunction with MICCAI 2018, Granada, Spain, September 16-20, 2018 :...\| PubMed ID: 33094293	2018
Structured layer surface segmentation for retina OCT using fully convolutional regression networks. Medical image analysis\| PubMed ID: 33260113	2021
Autoencoder based self-supervised test-time adaptation for medical image analysis. Medical image analysis\| PubMed ID: 34246070	2021
Multi-atlas segmentation of the hydrocephalus brain using an adaptive ventricle atlas. Proceedings of SPIE--the International Society for Optical Engineering\| PubMed ID: 34376903	2018
Unsupervised MR harmonization by learning disentangled representations using information bottleneck theory. NeuroImage\| PubMed ID: 34506916	2021
Accurate Estimation of Total Intracranial Volume in MRI using a Multi-tasked Image-to-Image Translation Network. Proceedings of SPIE--the International Society for Optical Engineering\| PubMed ID: 34548736	2021