Ishita Mukerji

Molecular Biology and Biochemistry Department, Wesleyan University

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JoVE Journal Publications

ArticleTotal : 1	Year
Publication title Cited by 1	2022

Other Publications

Article	Year
UV resonance Raman and circular dichroism studies of a DNA duplex containing an A(3)T(3) tract: evidence for a premelting transition and three-centered H-bonds. Biochemistry\| PubMed ID: 11772004	2002
HU binding to bent DNA: a fluorescence resonance energy transfer and anisotropy study. Biochemistry\| PubMed ID: 12627977	2003
Bacillus subtilis SecA ATPase exists as an antiparallel dimer in solution. Biochemistry\| PubMed ID: 12873133	2003
Nucleotide and phospholipid-dependent control of PPXD and C-domain association for SecA ATPase. Biochemistry\| PubMed ID: 14621992	2003
Effects of HU binding on the equilibrium cyclization of mismatched, curved, and normal DNA. Biophysical journal\| PubMed ID: 14990489	2004
The HU-DNA binding interaction probed with UV resonance Raman spectroscopy: structural elements of specificity. Protein science : a publication of the Protein Society\| PubMed ID: 15322284	2004
Examination of the premelting transition of DNA A-tracts using a fluorescent adenosine analogue. Biochemistry\| PubMed ID: 16605272	2006
Bacterial protein HU dictates the morphology of DNA condensates produced by crowding agents and polyamines. Nucleic acids research\| PubMed ID: 17259223	2007
The role of beta93 Cys in the inhibition of Hb S fiber formation. Biophysical chemistry\| PubMed ID: 17350155	2007
Molecular beacon-equilibrium cyclization detection of DNA-protein complexes. Biophysical journal\| PubMed ID: 17631534	2007
Spectroscopic and molecular dynamics evidence for a sequential mechanism for the A-to-B transition in DNA. Biophysical journal\| PubMed ID: 18326653	2008
Formation of amyloid fibrils in vitro from partially unfolded intermediates of human gammaC-crystallin. Investigative ophthalmology & visual science\| PubMed ID: 19684009	2010
Real time monitoring of sickle cell hemoglobin fiber formation by UV resonance Raman spectroscopy. Biochemistry\| PubMed ID: 19778007	2009
Mapping of the signal peptide-binding domain of Escherichia coli SecA using Förster resonance energy transfer. Biochemistry\| PubMed ID: 20025247	2010
HU binding to a DNA four-way junction probed by Förster resonance energy transfer. Biochemistry\| PubMed ID: 21230005	2011
Nitric oxide reduces sickle hemoglobin polymerization: potential role of nitric oxide-induced charge alteration in depolymerization. Archives of biochemistry and biophysics\| PubMed ID: 21457702	2011
Molecular dynamics of a DNA Holliday junction: the inverted repeat sequence d(CCGGTACCGG)₄. Biophysical journal\| PubMed ID: 22325278	2012
Applying 6-methylisoxanthopterin-enhanced fluorescence to examine protein-DNA interactions in the picomolar range. Biochemistry\| PubMed ID: 22849374	2012
Analysis of high-affinity binding of protein kinase R to double-stranded RNA. Biochemistry\| PubMed ID: 23062027	2012
Defining the solution state dimer structure of Escherichia coli SecA using Förster resonance energy transfer. Biochemistry\| PubMed ID: 23484952	2013
Conserved SecA Signal Peptide-Binding Site Revealed by Engineered Protein Chimeras and Förster Resonance Energy Transfer. Biochemistry\| PubMed ID: 26854513	2016
Holliday Junction Thermodynamics and Structure: Coarse-Grained Simulations and Experiments. Scientific reports\| PubMed ID: 26971574	2016
Probing the Ion Binding Site in a DNA Holliday Junction Using Förster Resonance Energy Transfer (FRET). International journal of molecular sciences\| PubMed ID: 26978349	2016
Photophysical Characterization of Enhanced 6-Methylisoxanthopterin Fluorescence in Duplex DNA. The journal of physical chemistry. B\| PubMed ID: 27934220	2016
The Stories Tryptophans Tell: Exploring Protein Dynamics of Heptosyltransferase I from Escherichia coli. Biochemistry\| PubMed ID: 28098447	2017
Alignment of the protein substrate hairpin along the SecA two-helix finger primes protein transport in . Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 28798063	2017
MutSγ-Induced DNA Conformational Changes Provide Insights into Its Role in Meiotic Recombination. Biophysical journal\| PubMed ID: 30467025	2018
Mismatch Recognition by Msh2-Msh6: Role of Structure and Dynamics. International journal of molecular sciences\| PubMed ID: 31480444	2019
SUMO fosters assembly and functionality of the MutSγ complex to facilitate meiotic crossing over. Developmental cell\| PubMed ID: 34214491	2021