Brian Haab

van andel research institute

Affiliated withvan andel research institute Van Andel Research Institute

Research Area

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JoVE Journal Publications

ArticleTotal : 1	Year
Publication title Cited by 6	2012

Other Publications

Article	Year
Protein microarrays for highly parallel detection and quantitation of specific proteins and antibodies in complex solutions. Genome biology\| PubMed ID: 11182887	2001
Gene expression profiling of clear cell renal cell carcinoma: gene identification and prognostic classification. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 11493696	2001
CIT: identification of differentially expressed clusters of genes from microarray data. Bioinformatics (Oxford, England)\| PubMed ID: 11836234	2002
Nature medicine\| PubMed ID: 11875502	2002
Identifying cancer-related genes in nasopharyngeal carcinoma cell lines using DNA and mRNA expression profiling analyses. International journal of oncology\| PubMed ID: 12429968	2002
Antibody microarray profiling of human prostate cancer sera: antibody screening and identification of potential biomarkers. Proteomics\| PubMed ID: 12548634	2003
Methods and applications of antibody microarrays in cancer research. Proteomics\| PubMed ID: 14595810	2003
Microarrays of tumor cell derived proteins uncover a distinct pattern of prostate cancer serum immunoreactivity. Proteomics\| PubMed ID: 14595819	2003
Multiplexed protein analysis using spotted antibody microarrays. Methods in molecular biology (Clifton, N.J.)\| PubMed ID: 15020778	2004
Two-color, rolling-circle amplification on antibody microarrays for sensitive, multiplexed serum-protein measurements. Genome biology\| PubMed ID: 15059261	2004
Journal of proteome research\| PubMed ID: 15113102	2004
Cancer research\| PubMed ID: 15342387	2004
Haematologica\| PubMed ID: 15377468	2004
Toxicology letters\| PubMed ID: 15454310	2004
Antibody arrays in cancer research. Molecular & cellular proteomics : MCP\| PubMed ID: 15671041	2005
Optimized normalization for antibody microarrays and application to serum-protein profiling. Molecular & cellular proteomics : MCP\| PubMed ID: 15793073	2005
Immunoassay and antibody microarray analysis of the HUPO Plasma Proteome Project reference specimens: systematic variation between sample types and calibration of mass spectrometry data. Proteomics\| PubMed ID: 16038022	2005
Proteomics\| PubMed ID: 16052621	2005
Overview of the HUPO Plasma Proteome Project: results from the pilot phase with 35 collaborating laboratories and multiple analytical groups, generating a core dataset of 3020 proteins and a... Proteomics\| PubMed ID: 16104056	2005
Distinctive serum protein profiles involving abundant proteins in lung cancer patients based upon antibody microarray analysis. BMC cancer\| PubMed ID: 16117833	2005
Multiplexed protein analysis using antibody microarrays and label-based detection. Methods in molecular medicine\| PubMed ID: 16156104	2005
Antibody microarray profiling reveals individual and combined serum proteins associated with pancreatic cancer. Cancer research\| PubMed ID: 16322270	2005
Profiling bladder cancer using targeted antibody arrays. The American journal of pathology\| PubMed ID: 16400012	2006
RCA-enhanced protein detection arrays. Methods in molecular biology (Clifton, N.J.)\| PubMed ID: 16785639	2006
Applications of antibody array platforms. Current opinion in biotechnology\| PubMed ID: 16837184	2006
A reagent resource to identify proteins and peptides of interest for the cancer community: a workshop report. Molecular & cellular proteomics : MCP\| PubMed ID: 16867976	2006
Journal of proteome research\| PubMed ID: 16889408	2006
Antibody array profiling reveals serum TSP-1 as a marker to distinguish benign from malignant prostatic disease. The Prostate\| PubMed ID: 17192876	2007
Multiplexed analysis of glycan variation on native proteins captured by antibody microarrays. Nature methods\| PubMed ID: 17417647	2007
A hierarchical approach employing metabolic and gene expression profiles to identify the pathways that confer cytotoxicity in HepG2 cells. BMC systems biology\| PubMed ID: 17498300	2007
Comprehensive proteome analysis of an Apc mouse model uncovers proteins associated with intestinal tumorigenesis. Cancer prevention research (Philadelphia, Pa.)\| PubMed ID: 19240248	2009
Low-volume, high-throughput sandwich immunoassays for profiling plasma proteins in mice: identification of early-stage systemic inflammation in a mouse model of intestinal cancer. Molecular oncology\| PubMed ID: 19305640	2007
The prevalence and nature of glycan alterations on specific proteins in pancreatic cancer patients revealed using antibody-lectin sandwich arrays. Molecular & cellular proteomics : MCP\| PubMed ID: 19377061	2009
Analysis of glycans on serum proteins using antibody microarrays. Methods in molecular biology (Clifton, N.J.)\| PubMed ID: 19381946	2009
Microarrays in glycoproteomics research. Clinics in laboratory medicine\| PubMed ID: 19389548	2009
Mucin glycosylation is altered by pro-inflammatory signaling in pancreatic-cancer cells. Journal of proteome research\| PubMed ID: 19714813	2009
The development of an integrated platform to identify breast cancer glycoproteome changes in human serum. Journal of chromatography. A\| PubMed ID: 19782370	2010
A motif-based analysis of glycan array data to determine the specificities of glycan-binding proteins. Glycobiology\| PubMed ID: 19946132	2010
Antibody-array interaction mapping, a new method to detect protein complexes applied to the discovery and study of serum amyloid P interactions with kininogen in human plasma. Molecular & cellular proteomics : MCP\| PubMed ID: 20023212	2010
Antibody-lectin sandwich arrays for biomarker and glycobiology studies. Expert review of proteomics\| PubMed ID: 20121469	2010
Glycosylation variants of mucins and CEACAMs as candidate biomarkers for the diagnosis of pancreatic cystic neoplasms. Annals of surgery\| PubMed ID: 20395854	2010
Glycogene expression alterations associated with pancreatic cancer epithelial-mesenchymal transition in complementary model systems. PloS one\| PubMed ID: 20885998	2010
An experimental strategy for quantitative analysis of the humoral immune response to prostate cancer antigens using natural protein microarrays. Proteomics. Clinical applications\| PubMed ID: 21136701	2007
Proteomics. Clinical applications\| PubMed ID: 21136996	2009
Identification of blood-protein carriers of the CA 19-9 antigen and characterization of prevalence in pancreatic diseases. Proteomics\| PubMed ID: 21751362	2011
The fine specificity of mannose-binding and galactose-binding lectins revealed using outlier motif analysis of glycan array data. Glycobiology\| PubMed ID: 21875884	2012
High-throughput studies of protein glycoforms using antibody-lectin sandwich arrays. Methods in molecular biology (Clifton, N.J.)\| PubMed ID: 21901603	2011
PloS one\| PubMed ID: 22220206	2011
Comparison of surgical and endoscopic sample collection for pancreatic cyst fluid biomarker identification. Journal of proteome research\| PubMed ID: 22439797	2012
Diverse monoclonal antibodies against the CA 19-9 antigen show variation in binding specificity with consequences for clinical interpretation. Proteomics\| PubMed ID: 22623153	2012
Using lectins in biomarker research: addressing the limitations of sensitivity and availability. Proteomics. Clinical applications\| PubMed ID: 22927350	2012
Modulation of glycan detection on specific glycoproteins by lectin multimerization. Analytical chemistry\| PubMed ID: 23286506	2013
Specific glycoforms of MUC5AC and endorepellin accurately distinguish mucinous from nonmucinous pancreatic cysts. Molecular & cellular proteomics : MCP\| PubMed ID: 23836919	2013
Determining lectin specificity from glycan array data using motif segregation and GlycoSearch software. Current protocols in chemical biology\| PubMed ID: 23839995	2013
Prediction of glycan motifs using quantitative analysis of multi-lectin binding: Motifs on MUC1 produced by cultured pancreatic cancer cells. Proteomics. Clinical applications\| PubMed ID: 23956151	2013
Characterization of glycoproteins in pancreatic cyst fluid using a high-performance multiple lectin affinity chromatography platform. Journal of proteome research\| PubMed ID: 24303806	2014
Using antibody arrays to measure protein abundance and glycosylation: considerations for optimal performance. Current protocols in protein science\| PubMed ID: 24510592	2013
Array-based immunoassays with rolling-circle amplification detection. Methods in molecular biology (Clifton, N.J.)\| PubMed ID: 24623215	2014
Mesenchymal-like pancreatic cancer cells harbor specific genomic alterations more frequently than their epithelial-like counterparts. Molecular oncology\| PubMed ID: 24837184	2014
MALDI imaging mass spectrometry profiling of N-glycans in formalin-fixed paraffin embedded clinical tissue blocks and tissue microarrays. PloS one\| PubMed ID: 25184632	2014
Detection of distinct glycosylation patterns on human γ-glutamyl transpeptidase 1 using antibody-lectin sandwich array (ALSA) technology. BMC biotechnology\| PubMed ID: 25479762	2014
The detection and discovery of glycan motifs in biological samples using lectins and antibodies: new methods and opportunities. Advances in cancer research\| PubMed ID: 25727148	2015
Glycan motif profiling reveals plasma sialyl-lewis x elevations in pancreatic cancers that are negative for sialyl-lewis A. Molecular & cellular proteomics : MCP\| PubMed ID: 25733690	2015
Exploring the specificities of glycan-binding proteins using glycan array data and the GlycoSearch software. Methods in molecular biology (Clifton, N.J.)\| PubMed ID: 25753713	2015
Upregulation of glycans containing 3' fucose in a subset of pancreatic cancers uncovered using fusion-tagged lectins. Journal of proteome research\| PubMed ID: 25938165	2015
Segment and fit thresholding: a new method for image analysis applied to microarray and immunofluorescence data. Analytical chemistry\| PubMed ID: 26339978	2015
Definitive Characterization of CA 19-9 in Resectable Pancreatic Cancer Using a Reference Set of Serum and Plasma Specimens. PloS one\| PubMed ID: 26431551	2015
Multiplexed autoantigen microarrays identify HLA as a key driver of anti-desmoglein and -non-desmoglein reactivities in pemphigus. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 26831096	2016
Glycans related to the CA19-9 antigen are elevated in distinct subsets of pancreatic cancers and improve diagnostic accuracy over CA19-9. Cellular and molecular gastroenterology and hepatology\| PubMed ID: 26998508	2016
Characterizing Protein Glycosylation through On-Chip Glycan Modification and Probing. Analytical chemistry\| PubMed ID: 27809484	2016
A Gastric Glycoform of MUC5AC Is a Biomarker of Mucinous Cysts of the Pancreas. PloS one\| PubMed ID: 27992432	2016
The CA19-9 and Sialyl-TRA Antigens Define Separate Subpopulations of Pancreatic Cancer Cells. Scientific reports\| PubMed ID: 28642461	2017
Mining High-Complexity Motifs in Glycans: A New Language To Uncover the Fine Specificities of Lectins and Glycosidases. Analytical chemistry\| PubMed ID: 29058413	2017
Deciphering protein glycosylation by computational integration of on-chip profiling, glycan-array data, and mass spectrometry. Molecular & cellular proteomics : MCP\| PubMed ID: 30257876	2018