Brian Oliver

Section of Developmental Genomics, National Institutes of Health

Affiliated withNational Institutes of Health

Research Area

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JoVE Journal Publications

ArticleTotal : 1	Year
Publication title Cited by 21	2023

Other Publications

Article	Year
Gene discovery using computational and microarray analysis of transcription in the Drosophila melanogaster testis. Genome research\| PubMed ID: 11116097	2000
Sex determination signals control ovo-B transcription in Drosophila melanogaster germ cells. Genetics\| PubMed ID: 11861560	2002
Functional conservation for lipid storage droplet association among Perilipin, ADRP, and TIP47 (PAT)-related proteins in mammals, Drosophila, and Dictyostelium. The Journal of biological chemistry\| PubMed ID: 12077142	2002
Fly factory. Genome research\| PubMed ID: 12097337	2002
Gene expression neighborhoods. Journal of biology\| PubMed ID: 12144705	2002
Drosophila melanogaster, two years into the post-genomic era. Genome biology\| PubMed ID: 12184804	2002
Genetic control of germline sexual dimorphism in Drosophila. International review of cytology\| PubMed ID: 12211627	2002
Paucity of genes on the Drosophila X chromosome showing male-biased expression. Science (New York, N.Y.)\| PubMed ID: 12511656	2003
How many genes in a genome? Genome biology\| PubMed ID: 14709168	2003
FlyGEM, a full transcriptome array platform for the Drosophila community. Genome biology\| PubMed ID: 15003122	2004
Battle of the Xs. BioEssays : news and reviews in molecular, cellular and developmental biology\| PubMed ID: 15112234	2004
Molecular pathology of the MEN1 gene. Annals of the New York Academy of Sciences\| PubMed ID: 15153434	2004
A survey of ovary-, testis-, and soma-biased gene expression in Drosophila melanogaster adults. Genome biology\| PubMed ID: 15186491	2004
Drosophila microarray platforms. Briefings in functional genomics & proteomics\| PubMed ID: 15239930	2003
Core promoter sequences contribute to ovo-B regulation in the Drosophila melanogaster germline. Genetics\| PubMed ID: 15371353	2005
X for intersection: retrotransposition both on and off the X chromosome is more frequent. Trends in genetics : TIG\| PubMed ID: 15680505	2005
A non-random walk through the genome. Genome biology\| PubMed ID: 15833129	2005
Global analysis of X-chromosome dosage compensation. Journal of biology\| PubMed ID: 16507155	2006
One hundred years of high-throughput Drosophila research. Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology\| PubMed ID: 16821132	2006
Comparative genomics of Drosophila and human core promoters. Genome biology\| PubMed ID: 16827941	2006
Genetic interactions between Drosophila melanogaster menin and Jun/Fos. Developmental biology\| PubMed ID: 16930585	2006
Drosophila mojoless, a retroposed GSK-3, has functionally diverged to acquire an essential role in male fertility. Molecular biology and evolution\| PubMed ID: 17179138	2007
Dosage compensation goes global. Current opinion in genetics & development\| PubMed ID: 17307352	2007
Sex-specific DoublesexM expression in subsets of Drosophila somatic gonad cells. BMC developmental biology\| PubMed ID: 17935627	2007
Constraint and turnover in sex-biased gene expression in the genus Drosophila. Nature\| PubMed ID: 17994089	2007
Demasculinization of X chromosomes in the Drosophila genus. Nature\| PubMed ID: 17994090	2007
Sex, dose, and equality. PLoS biology\| PubMed ID: 18162049	2007
The sex chromosome that refused to die. BioEssays : news and reviews in molecular, cellular and developmental biology\| PubMed ID: 18404685	2008
COPI complex is a regulator of lipid homeostasis. PLoS biology\| PubMed ID: 19067489	2008
Drosophila germline sex determination: integration of germline autonomous cues and somatic signals. Current topics in developmental biology\| PubMed ID: 19118665	2008
An evolutionary consequence of dosage compensation on Drosophila melanogaster female X-chromatin structure? BMC genomics\| PubMed ID: 20051121	2010
Expression in aneuploid Drosophila S2 cells. PLoS biology\| PubMed ID: 20186269	2010
Overexpression of TUF1 restores respiratory growth and fluconazole sensitivity to a Cryptococcus neoformans vad1Delta mutant. Microbiology (Reading, England)\| PubMed ID: 20430817	2010
Germline-dependent gene expression in distant non-gonadal somatic tissues of Drosophila. BMC genomics\| PubMed ID: 20515475	2010
Transcriptional regulation by CHIP/LDB complexes. PLoS genetics\| PubMed ID: 20730086	2010
Identification of functional elements and regulatory circuits by Drosophila modENCODE. Science (New York, N.Y.)\| PubMed ID: 21177974	2010
Microarrays, deep sequencing and the true measure of the transcriptome. BMC biology\| PubMed ID: 21627854	2011
Lipid profiles of female and male Drosophila. BMC research notes\| PubMed ID: 21676256	2011
Synthetic spike-in standards for RNA-seq experiments. Genome research\| PubMed ID: 21816910	2011
Evidence for compensatory upregulation of expressed X-linked genes in mammals, Caenorhabditis elegans and Drosophila melanogaster. Nature genetics\| PubMed ID: 22019781	2011
Mediation of Drosophila autosomal dosage effects and compensation by network interactions. Genome biology\| PubMed ID: 22531030	2012
Genomics of sex determination in Drosophila. Briefings in functional genomics\| PubMed ID: 23023665	2012
Simplification and desexualization of gene expression in self-fertile nematodes. Current biology : CB\| PubMed ID: 23103191	2012
Design of RNA splicing analysis null models for post hoc filtering of Drosophila head RNA-Seq data with the splicing analysis kit (Spanki). BMC bioinformatics\| PubMed ID: 24209455	2013
Transcriptional effects of gene dose reduction. Biology of sex differences\| PubMed ID: 24581086	2014
Comparative validation of the D. melanogaster modENCODE transcriptome annotation. Genome research\| PubMed ID: 24985915	2014
Flipping the doublesex switch with a piRNA. Genome biology\| PubMed ID: 25002081	2014
Comparative analysis of the transcriptome across distant species. Nature\| PubMed ID: 25164755	2014
DNA copy number evolution in Drosophila cell lines. Genome biology\| PubMed ID: 25262759	2014
X Chromosome and Autosome Dosage Responses in Drosophila melanogaster Heads. G3 (Bethesda, Md.)\| PubMed ID: 25850426	2015
Sxl-Dependent, tra/tra2-Independent Alternative Splicing of the Drosophila melanogaster X-Linked Gene found in neurons. G3 (Bethesda, Md.)\| PubMed ID: 26511498	2015
Developmental biology: Females have a lot of guts. Nature\| PubMed ID: 26887491	2016
A Class of Diacylglycerol Acyltransferase 1 Inhibitors Identified by a Combination of Phenotypic High-throughput Screening, Genomics, and Genetics. EBioMedicine\| PubMed ID: 27428418	2016
External RNA Controls Consortium Beta Version Update. Journal of genomics\| PubMed ID: 27512518	2016
Effects of Gene Dose, Chromatin, and Network Topology on Expression in Drosophila melanogaster. PLoS genetics\| PubMed ID: 27599372	2016
Microenvironmental Gene Expression Plasticity Among Individual Drosophila melanogaster. G3 (Bethesda, Md.)\| PubMed ID: 27770026	2016
Differences in Allelic Frequency and CDRH3 Region Limit the Engagement of HIV Env Immunogens by Putative VRC01 Neutralizing Antibody Precursors. Cell reports\| PubMed ID: 27806295	2016
Expressed Structurally Stable Inverted Duplicates in Mammalian Genomes as Functional Noncoding Elements. Genome biology and evolution\| PubMed ID: 28338961	2017
Drosophila melanogaster positive transcriptional elongation factors regulate metabolic and sex-biased expression in adults. BMC genomics\| PubMed ID: 28521739	2017
Exploring Effects of Sex and Diet on Head Gene Expression. Journal of genomics\| PubMed ID: 29109800	2017
Dosage-Dependent Expression Variation Suppressed on the Male Chromosome. G3 (Bethesda, Md.)\| PubMed ID: 29242386	2018
Reprogramming of regulatory network using expression uncovers sex-specific gene regulation in Drosophila. Nature communications\| PubMed ID: 30283019	2018
Non-canonical Drosophila X chromosome dosage compensation and repressive topologically associated domains. Epigenetics & chromatin\| PubMed ID: 30355339	2018
Re-annotation of eight genomes. Life science alliance\| PubMed ID: 30599046	2018
Correction to: DNA copy number evolution in Drosophila cell lines. Genome biology\| PubMed ID: 30857560	2019
Author Correction: Reprogramming of regulatory network using expression uncovers sex-specific gene regulation in Drosophila. Nature communications\| PubMed ID: 31358758	2019
Heterochromatin Stabilization Requires the Zinc-Finger Protein Small Ovary. Genetics\| PubMed ID: 31558581	2019
Sperm Head-Tail Linkage Requires Restriction of Pericentriolar Material to the Proximal Centriole End. Developmental cell\| PubMed ID: 32169161	2020
Drosophila balancer reengineering using polycistronic gRNA for CRISPR/Cas9 gene editing. microPublication biology\| PubMed ID: 32550371	2018
is a 5' UTR deletion of the essential gene in . microPublication biology\| PubMed ID: 32550484	2020
Dynamic sex chromosome expression in Drosophila male germ cells. Nature communications\| PubMed ID: 33563972	2021
Fly Cell Atlas: A single-nucleus transcriptomic atlas of the adult fruit fly. Science (New York, N.Y.)\| PubMed ID: 35239393	2022
Stochastic Modeling of Gene Expression Evolution Uncovers Tissue- and Sex-Specific Properties of Expression Evolution in the Genus. Journal of computational biology : a journal of computational molecular cell biology\| PubMed ID: 36037023	2023
NetREX-CF integrates incomplete transcription factor data with gene expression to reconstruct gene regulatory networks. Communications biology\| PubMed ID: 36418514	2022
Creation of a new X chromosome balancer, ( ), using the CRISPR/Cas9 gene-editing system. microPublication biology\| PubMed ID: 36439394	2022
Whole Animal Feeding FLat (WAFFL): a complete and comprehensive validation of a novel, high-throughput fly experimentation system. G3 (Bethesda, Md.)\| PubMed ID: 36650008	2023
Emergent dynamics of adult stem cell lineages from single nucleus and single cell RNA-Seq of testes. eLife\| PubMed ID: 36795469	2023