Robert Gifford

School of Biodiversity, University of Glasgow

Affiliated withUniversity of Glasgow MRC-University of Glasgow Centre for Virus Research

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JoVE Journal Publications

ArticleTotal : 1	Year
Publication title Cited by 10	2023

Other Publications

Article	Year
Extreme genetic fragility of the HIV-1 capsid. PLoS pathogens\| PubMed ID: 23818857	2013
A novel recombinant retrovirus in the genomes of modern birds combines features of avian and mammalian retroviruses. Journal of virology\| PubMed ID: 24352464	2014
Larger mammalian body size leads to lower retroviral activity. PLoS pathogens\| PubMed ID: 25033295	2014
Parvovirus-derived endogenous viral elements in two South American rodent genomes. Journal of virology\| PubMed ID: 25078696	2014
Filovirus receptor NPC1 contributes to species-specific patterns of ebolavirus susceptibility in bats. eLife\| PubMed ID: 26698106	2015
Identification and spontaneous immune targeting of an endogenous retrovirus K envelope protein in the Indian rhesus macaque model of human disease. Retrovirology\| PubMed ID: 26767784	2016
Late Ebola virus relapse causing meningoencephalitis: a case report. Lancet (London, England)\| PubMed ID: 27209148	2016
An Intact Retroviral Gene Conserved in Spiny-Rayed Fishes for over 100 My. Molecular biology and evolution\| PubMed ID: 28039384	2017
Discovery of an endogenous Deltaretrovirus in the genome of long-fingered bats (Chiroptera: Miniopteridae). Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 28280099	2017
Chapparvoviruses occur in at least three vertebrate classes and have a broad biogeographic distribution. The Journal of general virology\| PubMed ID: 28284244	2017
Co-option of an endogenous retrovirus envelope for host defense in hominid ancestors. eLife\| PubMed ID: 28397686	2017
A14 Comprehensive characterisation and evolutionary analysis of endogenous retroviruses in the mouse genome. Virus evolution\| PubMed ID: 28845254	2017
Hepatitis C and the absence of genomic data in low-income countries: a barrier on the road to elimination? The lancet. Gastroenterology & hepatology\| PubMed ID: 28895545	2017
Fundamental properties of the mammalian innate immune system revealed by multispecies comparison of type I interferon responses. PLoS biology\| PubMed ID: 29253856	2017
Novel Parvoviruses from Wild and Domestic Animals in Brazil Provide New Insights into Parvovirus Distribution and Diversity. Viruses\| PubMed ID: 29565808	2018
The evolution, distribution and diversity of endogenous circoviral elements in vertebrate genomes. Virus research\| PubMed ID: 29601845	2019
Ortervirales: New Virus Order Unifying Five Families of Reverse-Transcribing Viruses. Journal of virology\| PubMed ID: 29618642	2018
Remnants of an Ancient Deltaretrovirus in the Genomes of Horseshoe Bats (Rhinolophidae). Viruses\| PubMed ID: 29642581	2018
Reconstruction of a replication-competent ancestral murine endogenous retrovirus-L. Retrovirology\| PubMed ID: 29716624	2018
Insights into Circovirus Host Range from the Genomic Fossil Record. Journal of virology\| PubMed ID: 29875243	2018
Predicting the Effectiveness of Hepatitis C Virus Neutralizing Antibodies by Bioinformatic Analysis of Conserved Epitope Residues Using Public Sequence Data. Frontiers in immunology\| PubMed ID: 30013555	2018
KAP1 regulates endogenous retroviruses in adult human cells and contributes to innate immune control. EMBO reports\| PubMed ID: 30061100	2018
Nomenclature for endogenous retrovirus (ERV) loci. Retrovirology\| PubMed ID: 30153831	2018
Distribution, Diversity, and Evolution of Endogenous Retroviruses in Perissodactyl Genomes. Journal of virology\| PubMed ID: 30209175	2018
Endogenous amdoparvovirus-related elements reveal insights into the biology and evolution of vertebrate parvoviruses. Virus evolution\| PubMed ID: 30443409	2018
GLUE: a flexible software system for virus sequence data. BMC bioinformatics\| PubMed ID: 30563445	2018
Examination and Reconstruction of Three Ancient Endogenous Parvovirus Capsid Protein Gene Remnants Found in Rodent Genomes. Journal of virology\| PubMed ID: 30626673	2019
Origin and recent expansion of an endogenous gammaretroviral lineage in domestic and wild canids. Retrovirology\| PubMed ID: 30845962	2019
Interpreting Viral Deep Sequencing Data with GLUE. Viruses\| PubMed ID: 30987147	2019
Derivation of simian tropic HIV-1 infectious clone reveals virus adaptation to a new host. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 31048506	2019
An Ancient Lineage of Highly Divergent Parvoviruses Infects both Vertebrate and Invertebrate Hosts. Viruses\| PubMed ID: 31174309	2019
Molecular Properties and Evolutionary Origins of a Parvovirus-Derived Myosin Fusion Gene in Guinea Pigs. Journal of virology\| PubMed ID: 31217242	2019
Deltaretroviruses have circulated since at least the Paleogene and infected a broad range of mammalian species. Retrovirology\| PubMed ID: 31775783	2019
Retroviruses drive the rapid evolution of mammalian genes. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 31843890	2020
Rapid in-country sequencing of whole virus genomes to inform rabies elimination programmes. Wellcome open research\| PubMed ID: 32090172	2020
Hybrid Gene Origination Creates Human-Virus Chimeric Proteins during Infection. Cell\| PubMed ID: 32559462	2020
Evolution of dependoparvoviruses across geological timescales-implications for design of AAV-based gene therapy vectors. Virus evolution\| PubMed ID: 32913662	2020
SARS-CoV-2 ORF3b Is a Potent Interferon Antagonist Whose Activity Is Increased by a Naturally Occurring Elongation Variant. Cell reports\| PubMed ID: 32941788	2020
Amilorides inhibit SARS-CoV-2 replication in vitro by targeting RNA structures. bioRxiv : the preprint server for biology\| PubMed ID: 33299997	2020
Ancient evolution of hepadnaviral paleoviruses and their impact on host genomes. Virus evolution\| PubMed ID: 33747544	2021
Mapping the evolution of bornaviruses across geological timescales. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 34088856	2021
No evidence of SARS-CoV-2 reverse transcription and integration as the origin of chimeric transcripts in patient tissues. Proceedings of the National Academy of Sciences of the United States of America\| PubMed ID: 34344759	2021
Amilorides inhibit SARS-CoV-2 replication in vitro by targeting RNA structures. Science advances\| PubMed ID: 34826236	2021
Making genomic surveillance deliver: A lineage classification and nomenclature system to inform rabies elimination. PLoS pathogens\| PubMed ID: 35500026	2022
Emergence of Compensatory Mutations Reveals the Importance of Electrostatic Interactions between HIV-1 Integrase and Genomic RNA. mBio\| PubMed ID: 35975921	2022
A satellite DNA array barcodes chromosome 7 and regulates totipotency via ZFP819. Science advances\| PubMed ID: 36306355	2022
Comparative analysis reveals the long-term coevolutionary history of parvoviruses and vertebrates. PLoS biology\| PubMed ID: 36445931	2022
Comparative analysis of genome-encoded viral sequences reveals the evolutionary history of flavivirids (family ). Virus evolution\| PubMed ID: 36533146	2022
An endogenous lentivirus in the germline of a rodent. Retrovirology\| PubMed ID: 36539757	2022
Co-option of endogenous retroviruses through genetic escape from TRIM28 repression. Cell reports\| PubMed ID: 37294634	2023
Structures of the Hepaci-, Pegi-, and Pestiviruses envelope proteins suggest a novel membrane fusion mechanism. PLoS biology\| PubMed ID: 37432947	2023
Antiviral Activity of an Endogenous Parvoviral Element. Viruses\| PubMed ID: 37515112	2023